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Os08g0386300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Cytochrome b5 domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.3 (0.0187) R2 : 0.594
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.23 (0.0477) R2dC : 0.593 R2C : 0.585
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.112 (0.0393) R2dN8 : 0.00936 R2N8 : 0.00146
σ : 0.352
deviance : 56.73
__
_____
C
peak time of C : 20
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
37.55 0.288 11.2 0.718 1.27 -0.494 0.0354 0.0824 0.257 20.1 31.67 2763 -- --
37.55 0.285 11.2 0.709 1.27 -0.492 0.0392 -- 0.256 20.1 31.75 2760 -- --
37.55 0.285 11.2 0.717 1.27 -0.495 -- 0.0852 0.257 20.1 31.7 2763 -- --
37.56 0.285 11.2 0.707 1.27 -0.491 -- -- 0.255 20.1 31.73 2760 -- --
120.25 0.511 11.2 0.597 -- -0.637 -- -0.4 0.206 -- 38 4426 -- --
44.13 0.311 11.2 0.692 1.23 -- 0.0333 -- 0.189 20 -- -- -- --
44.14 0.311 11.2 0.691 1.23 -- -- -- 0.189 20 -- -- -- --
120.38 0.511 11.2 0.608 -- -0.607 -- -- 0.201 -- 36.55 4426 -- --
44.51 0.311 11.2 -- 1.25 -0.702 -- -- 0.182 20 48.71 16470 -- --
126.93 0.526 11.2 0.678 -- -- -- -- 0.173 -- -- -- -- --
56.73 0.352 11.3 -- 1.23 -- -- -- 0.112 20 -- -- -- --
126.21 0.523 11.2 -- -- -0.711 -- -- 0.113 -- 51.81 17344 -- --
139.07 0.55 11.2 -- -- -- -- -- 0.0979 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 34.94 temperature 15.0 90 > th dose independent rect. 4 17
2 35.34 temperature 15.0 270 > th dose independent rect. 2 18
3 35.34 temperature 15.0 270 > th dose independent rect. 1 20
5 35.57 wind 7.0 90 < th dose independent rect. 21 7
7 35.61 wind 9.0 270 < th dose dependent rect. 21 4
8 35.61 wind 9.0 90 < th dose dependent rect. 21 7
9 35.62 temperature 10.0 90 > th dose independent rect. 21 7
10 35.62 temperature 30.0 90 < th dose independent rect. 21 7
11 35.62 humidity 50.0 90 > th dose independent rect. 21 7
14 35.62 atmosphere 995.0 90 > th dose independent rect. 21 7
15 35.62 radiation 1.0 90 < th dose independent rect. 21 7
20 35.62 wind 9.0 90 < th dose independent rect. 4 17
22 35.62 atmosphere 1015.0 90 < th dose independent rect. 4 17
23 35.62 radiation 1.0 90 < th dose dependent rect. 21 7
28 35.65 precipitation 0.1 270 < th dose independent rect. 2 18
29 35.65 precipitation 0.1 270 < th dose dependent rect. 2 18
30 35.66 precipitation 0.1 270 < th dose independent rect. 1 20
31 35.66 precipitation 0.1 270 < th dose dependent rect. 1 20
33 35.69 atmosphere 995.0 270 > th dose independent rect. 6 10
34 35.70 wind 7.0 43200 > th dose dependent rect. 12 1
37 35.72 wind 5.0 270 < th dose independent rect. 21 4
39 35.78 precipitation 0.1 90 < th dose independent rect. 4 17
40 35.78 precipitation 0.1 90 < th dose dependent rect. 4 17
41 35.81 precipitation 0.1 90 < th dose independent rect. 21 7
43 35.81 precipitation 0.1 90 < th dose dependent rect. 21 7
48 35.91 wind 9.0 43200 < th dose independent rect. 12 1
51 35.93 wind 7.0 43200 > th dose independent rect. 12 1
54 35.97 precipitation 0.1 270 < th dose independent rect. 21 4
55 35.97 temperature 10.0 270 > th dose independent rect. 6 9
56 35.97 atmosphere 1015.0 270 < th dose independent rect. 6 9
57 35.97 temperature 10.0 270 > th dose independent rect. 15 15
58 35.97 precipitation 0.1 270 < th dose dependent rect. 21 4
60 35.98 precipitation 0.1 270 < th dose independent rect. 15 15
62 35.98 precipitation 0.1 270 < th dose dependent rect. 15 15
64 36.00 wind 9.0 270 < th dose independent rect. 2 18
66 36.02 radiation 20.0 4320 < th dose independent rect. 7 1
80 36.02 atmosphere 1015.0 270 < th dose independent rect. 2 18
86 36.03 temperature 10.0 270 > th dose independent rect. 21 4
87 36.03 temperature 30.0 270 < th dose independent rect. 21 4
88 36.03 humidity 50.0 270 > th dose independent rect. 21 4
91 36.03 atmosphere 995.0 270 > th dose independent rect. 21 4
92 36.03 radiation 1.0 270 < th dose independent rect. 21 4
100 36.03 radiation 1.0 270 < th dose dependent rect. 21 4
105 36.04 wind 9.0 270 < th dose independent rect. 15 15
106 36.04 radiation 40.0 270 < th dose independent rect. 15 15
108 36.04 wind 9.0 270 < th dose independent rect. 1 20
121 36.09 atmosphere 1015.0 270 < th dose independent rect. 1 20
126 36.15 precipitation 0.1 270 < th dose independent rect. 6 9
127 36.15 precipitation 0.1 270 < th dose dependent rect. 6 9
130 36.18 radiation 20.0 4320 < th dose independent rect. 24 8
192 36.28 wind 9.0 270 < th dose independent rect. 6 9
193 36.28 wind 1.0 43200 < th dose dependent rect. 3 9
200 36.36 humidity 50.0 270 > th dose dependent rect. 21 4
205 36.38 humidity 50.0 90 > th dose dependent rect. 21 7
249 36.44 humidity 50.0 270 > th dose independent rect. 6 9
259 36.51 temperature 15.0 270 > th dose independent rect. 24 23
260 36.52 wind 1.0 43200 < th dose dependent rect. 1 10
264 36.55 wind 5.0 43200 < th dose dependent rect. 4 2
270 36.59 wind 1.0 43200 < th dose independent rect. 1 10
273 36.59 radiation 40.0 1440 < th dose dependent rect. 24 6
293 36.60 atmosphere 1015.0 270 < th dose dependent rect. 3 2
305 36.62 wind 1.0 43200 < th dose independent rect. 3 8
314 36.65 wind 7.0 270 < th dose dependent rect. 3 3
316 36.66 wind 1.0 43200 > th dose independent rect. 3 7
317 36.66 wind 9.0 270 < th dose dependent rect. 23 1
327 36.68 wind 5.0 270 < th dose independent rect. 23 1
328 36.69 radiation 40.0 270 < th dose independent rect. 7 8
331 36.70 wind 1.0 43200 < th dose dependent rect. 1 6
337 36.71 precipitation 0.1 43200 > th dose dependent rect. 18 3
420 36.76 precipitation 0.1 43200 > th dose dependent rect. 16 1
422 36.77 humidity 60.0 14400 < th dose independent rect. 12 1
430 36.78 humidity 60.0 14400 > th dose independent rect. 12 1
431 36.78 precipitation 0.1 43200 < th dose independent rect. 16 4
435 36.78 precipitation 0.1 43200 < th dose dependent rect. 16 4
441 36.79 temperature 10.0 90 > th dose dependent rect. 21 7
443 36.80 precipitation 0.1 270 < th dose independent rect. 3 3
446 36.80 precipitation 0.1 270 < th dose dependent rect. 3 3
447 36.80 temperature 10.0 270 > th dose dependent rect. 21 4
449 36.81 precipitation 0.1 43200 > th dose independent rect. 16 4
452 36.81 radiation 40.0 4320 < th dose dependent rect. 7 2
454 36.82 wind 1.0 43200 > th dose dependent rect. 5 1
460 36.83 radiation 1.0 4320 > th dose dependent rect. 7 2
474 36.86 wind 1.0 43200 > th dose independent rect. 1 9
478 36.86 radiation 40.0 4320 < th dose dependent rect. 24 9
480 36.86 radiation 40.0 4320 < th dose dependent rect. 18 15
539 36.88 radiation 40.0 4320 < th dose dependent rect. 2 7
569 36.89 radiation 10.0 1440 < th dose dependent rect. 24 8
573 36.89 radiation 1.0 4320 > th dose dependent rect. 18 15
574 36.90 wind 1.0 43200 < th dose independent rect. 5 1
590 36.91 radiation 1.0 4320 > th dose dependent rect. 5 4
602 36.92 precipitation 0.1 43200 > th dose independent rect. 16 1
610 36.92 wind 7.0 43200 < th dose dependent rect. 1 6
612 36.92 radiation 1.0 10 < th dose dependent rect. 22 16
615 36.93 precipitation 0.1 43200 < th dose independent rect. 16 1
636 36.93 precipitation 0.1 43200 < th dose dependent rect. 16 1
652 36.94 atmosphere 995.0 270 > th dose independent rect. 6 20
653 36.94 wind 5.0 270 < th dose dependent rect. 4 1
660 36.95 atmosphere 995.0 90 > th dose dependent rect. 21 7
669 36.97 precipitation 0.1 270 < th dose independent rect. 23 1
674 36.97 precipitation 0.1 270 < th dose dependent rect. 23 1
675 36.97 atmosphere 995.0 270 > th dose dependent rect. 22 3
678 36.97 atmosphere 995.0 270 > th dose dependent rect. 21 5
679 36.97 precipitation 0.1 43200 > th dose dependent rect. 16 6
686 36.98 temperature 10.0 270 > th dose independent rect. 23 1
687 36.98 temperature 30.0 270 < th dose independent rect. 23 1
688 36.98 humidity 50.0 270 > th dose independent rect. 23 1
691 36.98 atmosphere 995.0 270 > th dose independent rect. 23 1
692 36.98 radiation 1.0 270 < th dose independent rect. 23 1
698 36.98 radiation 40.0 270 < th dose independent rect. 11 14
701 36.98 radiation 1.0 270 < th dose dependent rect. 23 1
712 36.98 radiation 1.0 10 < th dose dependent rect. 22 10
723 36.99 atmosphere 1015.0 90 < th dose independent rect. 21 7
746 37.01 atmosphere 995.0 90 > th dose independent rect. 4 17
755 37.01 radiation 10.0 4320 < th dose dependent rect. 18 15
758 37.01 radiation 30.0 4320 > th dose dependent rect. 14 19
777 37.02 humidity 70.0 14400 < th dose independent rect. 18 19
794 37.03 precipitation 0.1 270 < th dose independent rect. 1 8
805 37.03 precipitation 0.1 270 < th dose dependent rect. 1 8
833 37.06 wind 7.0 270 < th dose independent rect. 2 4
848 37.07 humidity 70.0 14400 < th dose independent rect. 10 2
908 37.09 humidity 50.0 270 > th dose dependent rect. 3 3
912 37.09 wind 1.0 43200 > th dose dependent rect. 1 6
917 37.10 atmosphere 995.0 270 > th dose independent rect. 16 14
943 37.11 wind 1.0 270 > th dose independent rect. 6 9
956 37.12 atmosphere 1015.0 270 < th dose independent rect. 21 4
967 37.13 temperature 10.0 270 > th dose independent rect. 2 4
969 37.13 temperature 30.0 270 < th dose independent rect. 2 4
970 37.13 humidity 50.0 270 > th dose independent rect. 2 4
973 37.13 atmosphere 995.0 270 > th dose independent rect. 2 4
974 37.13 atmosphere 1015.0 270 < th dose independent rect. 2 4
975 37.13 radiation 20.0 270 < th dose independent rect. 2 4
979 37.13 temperature 10.0 270 > th dose independent rect. 6 20