Os08g0385400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os08g0385400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 77.41 | 0.413 | 8.62 | -1.13 | 1.09 | -1.52 | 0.772 | -0.667 | 0.0644 | 4.12 | 26.68 | 10 | -- | -- |
| 77.56 | 0.413 | 8.64 | -1.24 | 1.07 | -1.48 | 0.537 | -- | 0.0411 | 4.13 | 26.68 | 10 | -- | -- |
| 78.23 | 0.415 | 8.63 | -1.2 | 1.08 | -1.49 | -- | -0.287 | 0.0491 | 4.11 | 26.68 | 10 | -- | -- |
| 78.37 | 0.415 | 8.64 | -1.24 | 1.07 | -1.48 | -- | -- | 0.039 | 4.11 | 26.68 | 10 | -- | -- |
| 122.79 | 0.519 | 8.6 | -1.06 | -- | -1.1 | -- | -0.324 | 0.22 | -- | 24.1 | 7 | -- | -- |
| 109.97 | 0.492 | 8.56 | -0.894 | 0.766 | -- | 0.514 | -- | 0.367 | 5.28 | -- | -- | -- | -- |
| 110.63 | 0.493 | 8.56 | -0.894 | 0.77 | -- | -- | -- | 0.364 | 5.26 | -- | -- | -- | -- |
| 122.97 | 0.519 | 8.61 | -1.1 | -- | -1.07 | -- | -- | 0.211 | -- | 24.1 | 7 | -- | -- |
| 115.43 | 0.503 | 8.58 | -- | 0.946 | -1 | -- | -- | 0.27 | 4.43 | 26.68 | 10 | -- | -- |
| 141.57 | 0.556 | 8.57 | -0.867 | -- | -- | -- | -- | 0.384 | -- | -- | -- | -- | -- |
| 131.68 | 0.537 | 8.54 | -- | 0.754 | -- | -- | -- | 0.464 | 5.3 | -- | -- | -- | -- |
| 152.76 | 0.578 | 8.57 | -- | -- | -0.705 | -- | -- | 0.384 | -- | 24.1 | 2 | -- | -- |
| 161.4 | 0.593 | 8.55 | -- | -- | -- | -- | -- | 0.48 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 77.31 | temperature | 25 | 10 | < th | dose dependent | rect. | 8 | 22 |
| 15 | 78.27 | temperature | 25 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 17 | 78.28 | temperature | 25 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 18 | 78.28 | temperature | 25 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 19 | 78.29 | temperature | 25 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 20 | 78.30 | temperature | 25 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 21 | 78.32 | temperature | 25 | 10 | < th | dose dependent | no | NA | NA |
| 26 | 78.43 | temperature | 25 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 27 | 78.48 | temperature | 25 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 30 | 78.56 | temperature | 25 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 32 | 78.57 | temperature | 25 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 43 | 78.81 | temperature | 25 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 72 | 79.82 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 1 |
| 73 | 79.83 | temperature | 30 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 89 | 80.10 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 11 |
| 90 | 80.12 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 9 |
| 94 | 80.13 | temperature | 30 | 1440 | < th | dose dependent | rect. | 16 | 10 |
| 95 | 80.13 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 14 |
| 98 | 80.15 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 7 |
| 103 | 80.16 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 7 |
| 128 | 80.22 | temperature | 30 | 1440 | < th | dose dependent | rect. | 15 | 15 |
| 146 | 80.26 | temperature | 10 | 1440 | > th | dose dependent | sin | 14 | NA |
| 154 | 80.28 | temperature | 30 | 1440 | < th | dose dependent | sin | 14 | NA |
| 278 | 80.51 | temperature | 25 | 1440 | < th | dose dependent | rect. | 11 | 19 |
| 406 | 80.74 | temperature | 10 | 1440 | > th | dose dependent | rect. | 11 | 19 |
| 556 | 80.96 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 18 |
| 781 | 81.22 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 794 | 81.24 | temperature | 10 | 1440 | > th | dose dependent | no | NA | NA |
| 798 | 81.24 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 23 |
| 806 | 81.25 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 23 |
| 830 | 81.28 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 23 |
| 832 | 81.28 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 853 | 81.30 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 866 | 81.31 | temperature | 10 | 1440 | > th | dose dependent | rect. | 5 | 23 |
| 874 | 81.32 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 23 |