FiT-DB / Search/ Help/ Sample detail

Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os08g0381000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.85 (0.0259) R2 : 0.0536
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.277 (0.0544) R2dN8 : 0.0692 R2N8 : 0.0536
σ : 0.487
deviance : 108.84
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
103.75 0.479 2.87 -0.239 0.0332 0.332 0.185 -1.64 0.224 13 29.3 49 -- --
105.52 0.482 2.85 -0.0367 0.0343 0.208 -0.0609 -- 0.26 15.5 29.2 49 -- --
103.88 0.475 2.87 -0.221 0.0349 0.329 -- -1.54 0.229 13.3 29.3 48 -- --
105.52 0.482 2.85 -0.037 0.0363 0.205 -- -- 0.26 14.3 29.2 49 -- --
103.94 0.475 2.87 -0.227 -- 0.346 -- -1.56 0.226 -- 29.33 48 -- --
107.6 0.486 2.85 0.00863 0.144 -- 0.0567 -- 0.28 14.5 -- -- -- --
107.61 0.486 2.85 0.0101 0.145 -- -- -- 0.281 14.6 -- -- -- --
105.46 0.48 2.85 -0.0395 -- 0.216 -- -- 0.263 -- 28.7 46 -- --
105.53 0.478 2.85 -- 0.0372 0.21 -- -- 0.266 13.8 29.1 30 -- --
108.84 0.487 2.85 0.00398 -- -- -- -- 0.277 -- -- -- -- --
107.61 0.485 2.85 -- 0.145 -- -- -- 0.279 14.6 -- -- -- --
105.5 0.48 2.85 -- -- 0.213 -- -- 0.268 -- 28.7 46 -- --
108.84 0.487 2.85 -- -- -- -- -- 0.277 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 102.68 temperature 25.0 90 > th dose independent rect. 4 1
4 102.73 temperature 25.0 90 > th dose independent rect. 10 1
5 102.78 temperature 25.0 90 > th dose dependent rect. 10 1
6 102.79 temperature 25.0 90 > th dose dependent rect. 4 1
7 102.83 wind 3.0 10 < th dose dependent rect. 10 2
8 102.86 wind 3.0 30 < th dose independent rect. 22 1
9 102.91 humidity 80.0 30 > th dose independent rect. 22 1
11 102.96 wind 5.0 30 < th dose dependent rect. 22 1
13 102.98 temperature 25.0 30 > th dose independent rect. 22 1
16 103.01 precipitation 0.1 30 < th dose independent rect. 22 1
17 103.01 precipitation 0.1 30 < th dose dependent rect. 22 1
18 103.02 radiation 1.0 1440 > th dose independent rect. 11 1
20 103.02 humidity 70.0 30 > th dose dependent rect. 22 1
21 103.02 temperature 25.0 90 > th dose dependent rect. 7 4
22 103.03 atmosphere 1000.0 30 > th dose independent rect. 22 1
24 103.04 humidity 90.0 10 < th dose independent rect. 4 1
28 103.07 wind 9.0 1440 < th dose independent rect. 23 1
29 103.07 temperature 10.0 1440 > th dose independent rect. 23 1
32 103.07 temperature 30.0 1440 < th dose independent rect. 23 1
36 103.07 humidity 50.0 1440 > th dose independent rect. 23 1
46 103.07 atmosphere 995.0 1440 > th dose independent rect. 23 1
47 103.07 radiation 1.0 1440 < th dose independent rect. 23 1
67 103.07 temperature 10.0 1440 > th dose independent rect. 24 23
70 103.07 temperature 10.0 30 > th dose dependent rect. 22 1
71 103.07 atmosphere 995.0 30 > th dose dependent rect. 22 1
72 103.07 radiation 1.0 1440 < th dose dependent rect. 23 1
79 103.08 temperature 10.0 30 > th dose independent rect. 22 1
81 103.08 temperature 30.0 30 < th dose independent rect. 22 1
82 103.08 humidity 50.0 30 > th dose independent rect. 22 1
86 103.08 atmosphere 1010.0 30 < th dose independent rect. 22 1
88 103.08 radiation 1.0 30 < th dose independent rect. 22 1
93 103.08 temperature 10.0 30 > th dose independent rect. 23 23
96 103.08 radiation 1.0 30 < th dose dependent rect. 22 1
101 103.09 humidity 90.0 30 < th dose independent rect. 22 1
103 103.12 wind 1.0 30 > th dose independent rect. 22 1
108 103.20 wind 1.0 30 < th dose independent rect. 10 1
109 103.20 temperature 10.0 1440 > th dose independent rect. 11 1
113 103.20 atmosphere 995.0 1440 > th dose independent rect. 11 1
116 103.20 precipitation 0.1 1440 < th dose independent rect. 11 1
117 103.20 temperature 10.0 1440 > th dose independent rect. 12 23
121 103.20 precipitation 0.1 1440 < th dose dependent rect. 11 1
123 103.22 humidity 70.0 30 < th dose independent rect. 10 1
125 103.23 precipitation 0.1 30 < th dose independent rect. 11 23
126 103.23 atmosphere 1015.0 30 < th dose dependent rect. 22 1
127 103.23 precipitation 0.1 30 < th dose dependent rect. 11 23
129 103.24 temperature 25.0 90 > th dose dependent rect. 3 8
130 103.25 atmosphere 1005.0 30 > th dose independent rect. 10 1
131 103.25 atmosphere 1005.0 30 > th dose dependent rect. 10 1
136 103.26 humidity 80.0 30 < th dose dependent rect. 10 1
138 103.27 radiation 20.0 30 > th dose independent rect. 10 1
141 103.27 radiation 40.0 14400 < th dose dependent rect. 23 1
146 103.29 atmosphere 1010.0 30 < th dose independent rect. 10 1
154 103.31 humidity 60.0 30 > th dose independent rect. 10 1
156 103.31 radiation 30.0 30 < th dose independent rect. 10 1
158 103.31 wind 7.0 30 < th dose dependent rect. 10 1
168 103.33 wind 1.0 30 > th dose independent rect. 10 1
169 103.33 temperature 10.0 30 > th dose independent rect. 10 1
171 103.33 temperature 30.0 30 < th dose independent rect. 10 1
178 103.33 precipitation 0.1 30 < th dose independent rect. 10 1
179 103.33 temperature 10.0 30 > th dose independent rect. 11 23
180 103.33 radiation 10.0 30 > th dose dependent rect. 10 1
182 103.33 precipitation 0.1 30 < th dose dependent rect. 10 1
185 103.35 temperature 30.0 30 < th dose dependent rect. 22 1
188 103.36 radiation 40.0 30 < th dose dependent rect. 10 1
195 103.40 atmosphere 995.0 30 > th dose independent rect. 11 23
196 103.41 wind 9.0 30 < th dose independent rect. 23 23
202 103.43 humidity 50.0 30 > th dose dependent rect. 10 1
203 103.43 atmosphere 1015.0 30 < th dose dependent rect. 10 1
205 103.43 temperature 25.0 30 > th dose dependent rect. 8 7
207 103.46 wind 1.0 30 > th dose dependent rect. 10 1
214 103.49 temperature 30.0 30 < th dose independent rect. 11 23
215 103.49 humidity 50.0 30 > th dose independent rect. 11 23
216 103.49 wind 1.0 30 > th dose dependent rect. 4 1
223 103.52 wind 1.0 30 > th dose dependent rect. 22 1
228 103.53 temperature 25.0 90 > th dose dependent sin 4 NA
252 103.64 humidity 90.0 30 < th dose dependent rect. 22 1
267 103.65 temperature 25.0 90 > th dose dependent rect. 3 12
307 103.83 wind 1.0 30 > th dose independent rect. 4 1
335 103.89 temperature 25.0 270 < th dose independent rect. 14 12
336 103.89 wind 9.0 30 < th dose independent rect. 11 23
343 103.97 temperature 25.0 90 > th dose dependent rect. 22 17
368 104.06 temperature 25.0 90 > th dose independent rect. 8 3
370 104.07 temperature 25.0 30 > th dose dependent rect. 10 5
371 104.08 temperature 30.0 90 < th dose independent rect. 11 10
373 104.09 temperature 25.0 270 > th dose independent rect. 15 10
406 104.21 temperature 25.0 30 > th dose dependent rect. 8 10
439 104.34 temperature 25.0 270 > th dose independent rect. 15 15
457 104.38 temperature 10.0 30 > th dose dependent rect. 10 14
459 104.40 temperature 25.0 270 > th dose independent sin 15 NA
487 104.45 wind 1.0 1440 < th dose dependent rect. 24 1
499 104.47 temperature 25.0 270 > th dose independent rect. 3 8
510 104.48 wind 7.0 10 > th dose dependent rect. 12 1
530 104.52 wind 1.0 1440 < th dose independent rect. 24 1
558 104.55 wind 3.0 10 < th dose dependent rect. 10 14
562 104.56 temperature 25.0 270 > th dose independent rect. 7 1
564 104.56 humidity 50.0 720 > th dose independent rect. 3 8
620 104.64 temperature 25.0 270 < th dose independent sin 15 NA
633 104.67 temperature 25.0 10 < th dose independent rect. 16 10
653 104.69 temperature 25.0 90 > th dose independent rect. 18 9
672 104.71 temperature 25.0 30 > th dose dependent rect. 10 8
687 104.74 temperature 25.0 90 > th dose independent rect. 8 7
690 104.74 atmosphere 1015.0 30 < th dose independent rect. 11 23
721 104.79 temperature 10.0 720 > th dose independent rect. 15 8
723 104.79 temperature 10.0 720 > th dose independent rect. 23 16
727 104.80 humidity 90.0 1440 < th dose independent rect. 11 1
729 104.80 radiation 40.0 90 > th dose independent rect. 13 22
732 104.80 temperature 10.0 30 > th dose dependent rect. 8 16
734 104.81 atmosphere 995.0 720 > th dose independent rect. 15 8
746 104.82 temperature 25.0 720 > th dose independent rect. 19 2
749 104.82 atmosphere 1005.0 30 > th dose dependent rect. 4 1
754 104.83 wind 1.0 1440 > th dose independent rect. 24 1
757 104.83 temperature 25.0 90 > th dose independent rect. 18 13
774 104.85 wind 3.0 10 < th dose independent rect. 10 14
792 104.86 temperature 25.0 30 > th dose dependent rect. 17 22
811 104.88 temperature 25.0 90 > th dose dependent rect. 18 13
813 104.89 humidity 50.0 90 > th dose independent rect. 11 10
815 104.89 atmosphere 995.0 720 > th dose independent rect. 23 16
829 104.91 atmosphere 1005.0 30 > th dose dependent rect. 16 5
833 104.92 temperature 25.0 90 > th dose independent rect. 3 12
838 104.93 temperature 10.0 720 > th dose independent rect. 3 8
839 104.93 atmosphere 995.0 720 > th dose independent rect. 3 8
841 104.93 temperature 10.0 720 > th dose independent rect. 11 16
852 104.94 wind 1.0 1440 < th dose dependent rect. 4 2
861 104.95 temperature 25.0 270 < th dose independent rect. 2 11
879 104.97 wind 9.0 90 < th dose independent rect. 21 14
880 104.97 precipitation 0.1 90 < th dose independent rect. 21 14
883 104.97 precipitation 0.1 90 < th dose dependent rect. 21 14
894 104.99 atmosphere 995.0 720 > th dose independent rect. 11 16
902 105.00 temperature 10.0 90 > th dose independent rect. 11 10
903 105.00 atmosphere 1015.0 90 < th dose independent rect. 11 10
904 105.00 temperature 10.0 90 > th dose independent rect. 21 14
905 105.00 atmosphere 995.0 90 > th dose independent rect. 21 14
910 105.00 radiation 30.0 720 < th dose dependent rect. 14 10
929 105.03 wind 9.0 30 < th dose independent rect. 10 14
938 105.04 precipitation 0.1 720 < th dose independent rect. 15 8
943 105.04 precipitation 0.1 720 < th dose dependent rect. 15 8
949 105.05 temperature 25.0 720 > th dose independent rect. 15 6
953 105.05 temperature 30.0 90 < th dose independent rect. 24 21
961 105.06 wind 3.0 720 < th dose independent rect. 2 1
981 105.07 temperature 15.0 30 > th dose independent rect. 10 14
982 105.07 precipitation 0.1 30 < th dose independent rect. 10 14
987 105.07 precipitation 0.1 30 < th dose dependent rect. 10 14
990 105.08 radiation 1.0 720 < th dose independent rect. 14 1
991 105.08 temperature 25.0 30 > th dose independent rect. 10 5
992 105.08 wind 9.0 720 < th dose independent rect. 3 8
997 105.08 humidity 50.0 90 > th dose independent rect. 21 14
998 105.08 radiation 1.0 720 < th dose dependent rect. 14 1