Os08g0378800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Sterile alpha motif homology 2 domain containing protein.
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Os08g0378800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Sterile alpha motif homology 2 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 23.63 | 0.228 | 9.07 | -0.134 | 0.295 | -0.747 | -0.179 | 1.31 | -0.182 | 3.07 | 49.88 | 4332 | -- | -- |
| 24.07 | 0.228 | 9.11 | -0.279 | 0.291 | -0.323 | -0.146 | -- | -0.182 | 3.07 | 53 | 2691 | -- | -- |
| 23.73 | 0.227 | 9.07 | -0.127 | 0.293 | -0.753 | -- | 1.31 | -0.183 | 2.89 | 49.93 | 4330 | -- | -- |
| 24.11 | 0.229 | 9.11 | -0.281 | 0.298 | -0.342 | -- | -- | -0.175 | 2.9 | 52 | 2681 | -- | -- |
| 28.57 | 0.249 | 9.07 | -0.142 | -- | -0.654 | -- | 1.1 | -0.16 | -- | 49 | 4402 | -- | -- |
| 26.6 | 0.242 | 9.1 | -0.375 | 0.264 | -- | -0.25 | -- | -0.127 | 3.44 | -- | -- | -- | -- |
| 26.77 | 0.242 | 9.1 | -0.371 | 0.261 | -- | -- | -- | -0.126 | 3.12 | -- | -- | -- | -- |
| 25.91 | 0.237 | 9.09 | -0.317 | -- | -0.434 | -- | -- | -0.0828 | -- | 75.78 | 1737 | -- | -- |
| 26.06 | 0.238 | 9.11 | -- | 0.296 | -0.424 | -- | -- | -0.167 | 2.82 | 52.85 | 2735 | -- | -- |
| 30.67 | 0.259 | 9.1 | -0.36 | -- | -- | -- | -- | -0.119 | -- | -- | -- | -- | -- |
| 30.4 | 0.258 | 9.09 | -- | 0.254 | -- | -- | -- | -0.0842 | 3.12 | -- | -- | -- | -- |
| 28.54 | 0.249 | 9.08 | -- | -- | -0.465 | -- | -- | -0.0434 | -- | 75.17 | 1733 | -- | -- |
| 34.08 | 0.273 | 9.09 | -- | -- | -- | -- | -- | -0.0788 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 21.88 | wind | 3.0 | 14400 | < th | dose independent | rect. | 3 | 1 |
| 3 | 21.99 | wind | 3.0 | 14400 | > th | dose independent | rect. | 3 | 1 |
| 4 | 22.01 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 7 | 22.08 | wind | 1.0 | 43200 | < th | dose independent | rect. | 24 | 2 |
| 31 | 22.22 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 32 | 22.23 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 45 | 22.28 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 24 | 2 |
| 48 | 22.29 | wind | 1.0 | 43200 | > th | dose independent | rect. | 24 | 2 |
| 66 | 22.36 | wind | 3.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 68 | 22.36 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 9 | 2 |
| 77 | 22.39 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 5 | 8 |
| 88 | 22.42 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 22 |
| 92 | 22.43 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 3 | 10 |
| 93 | 22.43 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 21 | 15 |
| 95 | 22.43 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 9 | 21 |
| 98 | 22.45 | wind | 3.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 108 | 22.46 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 8 | 5 |
| 113 | 22.47 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 14 |
| 115 | 22.47 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 9 | 2 |
| 118 | 22.48 | wind | 9.0 | 14400 | < th | dose independent | rect. | 5 | 6 |
| 120 | 22.48 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 9 | 2 |
| 122 | 22.48 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 3 | 10 |
| 136 | 22.50 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 14 |
| 139 | 22.51 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 142 | 22.51 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 9 |
| 151 | 22.52 | wind | 3.0 | 43200 | < th | dose independent | rect. | 23 | 16 |
| 160 | 22.53 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 6 | 8 |
| 176 | 22.55 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 178 | 22.55 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 6 | 8 |
| 182 | 22.55 | wind | 3.0 | 43200 | > th | dose independent | rect. | 23 | 16 |
| 231 | 22.59 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 9 |
| 251 | 22.60 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 252 | 22.60 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 268 | 22.61 | wind | 9.0 | 14400 | < th | dose independent | rect. | 18 | 20 |
| 271 | 22.61 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 7 | 5 |
| 280 | 22.62 | wind | 3.0 | 43200 | < th | dose independent | sin | 4 | NA |
| 281 | 22.62 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 9 | 2 |
| 289 | 22.63 | wind | 3.0 | 43200 | < th | dose independent | rect. | 9 | 4 |
| 317 | 22.65 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 6 | 5 |
| 340 | 22.66 | wind | 3.0 | 43200 | < th | dose dependent | sin | 7 | NA |
| 347 | 22.67 | wind | 3.0 | 43200 | > th | dose independent | sin | 4 | NA |
| 380 | 22.68 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 3 | 1 |
| 473 | 22.73 | wind | 3.0 | 43200 | < th | dose independent | rect. | 20 | 11 |
| 480 | 22.73 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 21 | 10 |
| 519 | 22.76 | wind | 3.0 | 43200 | > th | dose independent | rect. | 9 | 5 |
| 523 | 22.76 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 581 | 22.79 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 609 | 22.81 | wind | 9.0 | 14400 | < th | dose independent | sin | 7 | NA |
| 620 | 22.81 | wind | 3.0 | 43200 | > th | dose independent | rect. | 20 | 11 |
| 621 | 22.81 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 3 | 3 |
| 628 | 22.82 | wind | 3.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 632 | 22.82 | wind | 9.0 | 14400 | > th | dose independent | rect. | 5 | 6 |
| 669 | 22.83 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 22 | 16 |
| 694 | 22.85 | wind | 3.0 | 43200 | > th | dose independent | rect. | 11 | 2 |
| 703 | 22.85 | wind | 3.0 | 43200 | < th | dose independent | rect. | 23 | 8 |
| 714 | 22.85 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 21 | 15 |
| 730 | 22.86 | wind | 9.0 | 14400 | > th | dose independent | rect. | 18 | 20 |
| 763 | 22.88 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 809 | 22.89 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 20 | 18 |
| 842 | 22.91 | wind | 3.0 | 43200 | > th | dose independent | rect. | 23 | 8 |
| 893 | 22.93 | humidity | 80.0 | 1440 | < th | dose independent | sin | 4 | NA |
| 909 | 22.93 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 919 | 22.93 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 2 | 12 |
| 924 | 22.94 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 15 | 2 |
| 938 | 22.94 | wind | 1.0 | 14400 | > th | dose dependent | sin | 5 | NA |
| 942 | 22.94 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 15 | 2 |
| 956 | 22.95 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 15 | 2 |