Os08g0378000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os08g0378000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 200.11 | 0.665 | 7.91 | -1.08 | 1.87 | 2.09 | 0.281 | -0.00888 | 1.07 | 22 | 20.9 | 2175 | -- | -- |
| 200.11 | 0.659 | 7.91 | -1.08 | 1.87 | 2.09 | 0.277 | -- | 1.07 | 22 | 20.9 | 2168 | -- | -- |
| 200.39 | 0.659 | 7.91 | -1.07 | 1.87 | 2.1 | -- | 0.0706 | 1.08 | 22 | 20.91 | 2150 | -- | -- |
| 200.4 | 0.659 | 7.91 | -1.09 | 1.87 | 2.09 | -- | -- | 1.07 | 22 | 20.9 | 2151 | -- | -- |
| 366.45 | 0.892 | 7.86 | -0.793 | -- | 2.28 | -- | 0.385 | 1.04 | -- | 21.3 | 814 | -- | -- |
| 305.88 | 0.82 | 7.79 | -0.0765 | 2.01 | -- | 0.291 | -- | 1.64 | 22.1 | -- | -- | -- | -- |
| 306.21 | 0.819 | 7.79 | -0.0882 | 2 | -- | -- | -- | 1.63 | 22.1 | -- | -- | -- | -- |
| 366.88 | 0.892 | 7.88 | -0.894 | -- | 2.26 | -- | -- | 1.02 | -- | 21.32 | 818 | -- | -- |
| 216.18 | 0.685 | 7.87 | -- | 1.72 | 1.63 | -- | -- | 1.24 | 21.9 | 21.3 | 935 | -- | -- |
| 549.02 | 1.09 | 7.74 | -0.0619 | -- | -- | -- | -- | 1.64 | -- | -- | -- | -- | -- |
| 306.42 | 0.819 | 7.79 | -- | 2 | -- | -- | -- | 1.64 | 22.1 | -- | -- | -- | -- |
| 385.99 | 0.915 | 7.84 | -- | -- | 2.08 | -- | -- | 1.15 | -- | 21.31 | 808 | -- | -- |
| 549.13 | 1.09 | 7.73 | -- | -- | -- | -- | -- | 1.64 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 191.53 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 2 | 193.88 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 3 | 195.53 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 9 |
| 4 | 195.64 | temperature | 20 | 1440 | > th | dose independent | rect. | 23 | 8 |
| 6 | 195.66 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 6 |
| 10 | 195.81 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 6 |
| 53 | 197.09 | temperature | 20 | 1440 | > th | dose independent | sin | 8 | NA |
| 72 | 197.70 | temperature | 20 | 1440 | < th | dose independent | sin | 8 | NA |
| 113 | 198.85 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 155 | 199.85 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 183 | 200.47 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 230 | 201.92 | temperature | 20 | 4320 | < th | dose independent | rect. | 19 | 5 |
| 237 | 202.02 | temperature | 20 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 271 | 202.77 | temperature | 20 | 4320 | > th | dose independent | rect. | 19 | 5 |
| 400 | 204.68 | temperature | 20 | 4320 | > th | dose independent | sin | 15 | NA |
| 413 | 204.83 | temperature | 20 | 4320 | < th | dose independent | sin | 15 | NA |
| 620 | 207.23 | temperature | 20 | 4320 | > th | dose independent | rect. | 6 | 22 |
| 647 | 207.37 | temperature | 20 | 4320 | < th | dose independent | rect. | 6 | 22 |
| 783 | 208.26 | temperature | 20 | 1440 | > th | dose independent | no | NA | NA |
| 791 | 208.32 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 10 |
| 852 | 208.75 | temperature | 20 | 4320 | > th | dose independent | rect. | 1 | 23 |
| 867 | 208.83 | temperature | 20 | 4320 | < th | dose independent | rect. | 1 | 23 |
| 870 | 208.85 | temperature | 20 | 1440 | < th | dose independent | no | NA | NA |
| 930 | 209.26 | temperature | 25 | 1440 | < th | dose dependent | rect. | 22 | 3 |
| 939 | 209.34 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 3 |
| 967 | 209.53 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 2 |
| 980 | 209.61 | temperature | 25 | 1440 | < th | dose dependent | sin | 10 | NA |