Os08g0366200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1313 family protein.
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Os08g0366200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF1313 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 13.38 | 0.172 | 10.4 | 0.215 | 0.209 | 0.515 | 0.158 | -0.189 | 0.065 | 9.79 | 23.92 | 1286 | -- | -- |
| 13.4 | 0.17 | 10.4 | 0.184 | 0.206 | 0.553 | 0.165 | -- | 0.0561 | 9.77 | 23.43 | 1277 | -- | -- |
| 13.47 | 0.171 | 10.4 | 0.22 | 0.211 | 0.518 | -- | -0.179 | 0.0638 | 9.74 | 23.75 | 1306 | -- | -- |
| 13.48 | 0.171 | 10.4 | 0.196 | 0.209 | 0.566 | -- | -- | 0.0539 | 9.7 | 23.3 | 1302 | -- | -- |
| 14.9 | 0.18 | 10.4 | 0.264 | -- | 0.532 | -- | -0.362 | 0.0922 | -- | 27.6 | 738 | -- | -- |
| 17.08 | 0.194 | 10.5 | 0.0286 | 0.223 | -- | 0.159 | -- | -0.0429 | 10.2 | -- | -- | -- | -- |
| 17.18 | 0.194 | 10.5 | 0.0347 | 0.222 | -- | -- | -- | -0.0426 | 10.1 | -- | -- | -- | -- |
| 15.03 | 0.181 | 10.4 | 0.191 | -- | 0.552 | -- | -- | 0.0796 | -- | 26.83 | 744 | -- | -- |
| 14.32 | 0.176 | 10.4 | -- | 0.208 | 0.45 | -- | -- | 0.0203 | 9.69 | 23.6 | 1259 | -- | -- |
| 20.16 | 0.21 | 10.5 | 0.0317 | -- | -- | -- | -- | -0.0429 | -- | -- | -- | -- | -- |
| 17.21 | 0.194 | 10.5 | -- | 0.222 | -- | -- | -- | -0.0465 | 10.1 | -- | -- | -- | -- |
| 15.87 | 0.186 | 10.4 | -- | -- | 0.477 | -- | -- | 0.0441 | -- | 26.87 | 734 | -- | -- |
| 20.19 | 0.21 | 10.5 | -- | -- | -- | -- | -- | -0.0465 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 13.04 | temperature | 25 | 1440 | < th | dose dependent | rect. | 2 | 1 |
| 6 | 13.14 | temperature | 10 | 1440 | > th | dose dependent | rect. | 2 | 1 |
| 76 | 13.32 | temperature | 25 | 1440 | < th | dose dependent | sin | 9 | NA |
| 112 | 13.35 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 187 | 13.40 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 414 | 13.50 | temperature | 30 | 270 | < th | dose dependent | rect. | 4 | 21 |
| 427 | 13.51 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 487 | 13.54 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 517 | 13.55 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 4 |
| 560 | 13.57 | temperature | 20 | 1440 | < th | dose independent | rect. | 17 | 13 |
| 585 | 13.58 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 6 |
| 587 | 13.58 | temperature | 20 | 1440 | < th | dose independent | rect. | 2 | 7 |
| 613 | 13.59 | temperature | 20 | 1440 | > th | dose independent | rect. | 17 | 14 |
| 636 | 13.60 | temperature | 20 | 1440 | < th | dose independent | sin | 8 | NA |
| 646 | 13.60 | temperature | 10 | 1440 | > th | dose dependent | sin | 10 | NA |
| 671 | 13.61 | temperature | 20 | 1440 | > th | dose independent | sin | 7 | NA |
| 717 | 13.62 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 13 |
| 825 | 13.65 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 13 |