Os08g0360000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os08g0360000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 64.22 | 0.377 | 8.38 | 2.38 | 2.2 | 0.432 | 0.435 | 0.788 | 0.211 | 19.2 | 19.99 | 293 | -- | -- |
| 65.56 | 0.377 | 8.36 | 2.48 | 2.2 | 0.302 | 0.185 | -- | 0.252 | 19.3 | 20.85 | 375 | -- | -- |
| 64.7 | 0.375 | 8.38 | 2.38 | 2.2 | 0.412 | -- | 0.697 | 0.215 | 19.2 | 19.96 | 290 | -- | -- |
| 65.51 | 0.377 | 8.36 | 2.49 | 2.21 | 0.313 | -- | -- | 0.256 | 19.3 | 21 | 503 | -- | -- |
| 312.29 | 0.828 | 8.32 | 2.38 | -- | 0.288 | -- | 0.161 | 0.185 | -- | 19.96 | 290 | -- | -- |
| 68.8 | 0.389 | 8.37 | 2.38 | 2.16 | -- | 0.189 | -- | 0.177 | 19.3 | -- | -- | -- | -- |
| 68.9 | 0.389 | 8.37 | 2.37 | 2.16 | -- | -- | -- | 0.177 | 19.3 | -- | -- | -- | -- |
| 312.17 | 0.826 | 8.31 | 2.4 | -- | 0.262 | -- | -- | 0.196 | -- | 21 | 503 | -- | -- |
| 106.53 | 0.481 | 8.5 | -- | 2.19 | -1.69 | -- | -- | -0.42 | 19.3 | 18.5 | 47520 | -- | -- |
| 315.76 | 0.83 | 8.32 | 2.34 | -- | -- | -- | -- | 0.141 | -- | -- | -- | -- | -- |
| 217.35 | 0.69 | 8.43 | -- | 2.13 | -- | -- | -- | -0.0869 | 19.4 | -- | -- | -- | -- |
| 323.94 | 0.838 | 8.43 | -- | -- | -1.62 | -- | -- | -0.338 | -- | 27.06 | 511 | -- | -- |
| 459.71 | 1 | 8.38 | -- | -- | -- | -- | -- | -0.118 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 60.85 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 23 | 11 |
| 2 | 61.13 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 23 | 8 |
| 12 | 61.66 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 2 | 7 |
| 26 | 61.96 | temperature | 20.0 | 10 | > th | dose dependent | sin | 7 | NA |
| 42 | 62.17 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 22 | 11 |
| 48 | 62.23 | temperature | 30.0 | 30 | < th | dose dependent | sin | 7 | NA |
| 52 | 62.26 | temperature | 20.0 | 270 | > th | dose independent | rect. | 1 | 9 |
| 76 | 62.35 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 21 | 14 |
| 97 | 62.48 | temperature | 20.0 | 270 | < th | dose independent | rect. | 24 | 7 |
| 101 | 62.51 | temperature | 25.0 | 720 | < th | dose independent | rect. | 19 | 11 |
| 102 | 62.52 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 20 | 5 |
| 104 | 62.53 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 22 | 4 |
| 105 | 62.53 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 20 | 7 |
| 106 | 62.53 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 19 | 9 |
| 109 | 62.54 | temperature | 20.0 | 270 | > th | dose independent | rect. | 14 | 22 |
| 122 | 62.58 | temperature | 25.0 | 720 | < th | dose independent | rect. | 21 | 3 |
| 133 | 62.63 | temperature | 25.0 | 720 | < th | dose independent | rect. | 20 | 5 |
| 142 | 62.68 | temperature | 25.0 | 720 | < th | dose independent | rect. | 20 | 8 |
| 230 | 62.98 | temperature | 25.0 | 720 | > th | dose independent | rect. | 22 | 1 |
| 241 | 63.01 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 22 | 1 |
| 265 | 63.08 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 22 | 14 |
| 303 | 63.16 | temperature | 20.0 | 270 | > th | dose independent | rect. | 1 | 22 |
| 316 | 63.19 | temperature | 25.0 | 720 | > th | dose independent | rect. | 20 | 7 |
| 386 | 63.33 | temperature | 25.0 | 720 | > th | dose independent | rect. | 20 | 10 |
| 413 | 63.40 | temperature | 25.0 | 720 | > th | dose independent | rect. | 21 | 3 |
| 416 | 63.40 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 24 | 12 |
| 421 | 63.42 | temperature | 20.0 | 270 | > th | dose independent | sin | 7 | NA |
| 458 | 63.47 | temperature | 20.0 | 270 | < th | dose independent | sin | 8 | NA |
| 509 | 63.52 | atmosphere | 1005.0 | 90 | > th | dose dependent | rect. | 24 | 9 |
| 512 | 63.53 | temperature | 20.0 | 10 | < th | dose independent | rect. | 24 | 9 |
| 538 | 63.56 | temperature | 25.0 | 720 | < th | dose independent | sin | 12 | NA |
| 594 | 63.63 | temperature | 20.0 | 10 | > th | dose independent | rect. | 2 | 10 |
| 621 | 63.67 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 673 | 63.74 | temperature | 20.0 | 30 | > th | dose independent | sin | 5 | NA |
| 674 | 63.74 | wind | 1.0 | 4320 | < th | dose independent | rect. | 2 | 3 |
| 685 | 63.75 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 686 | 63.75 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 688 | 63.75 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 802 | 63.85 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 18 | 15 |
| 809 | 63.86 | temperature | 20.0 | 10 | < th | dose independent | sin | 5 | NA |
| 842 | 63.88 | temperature | 20.0 | 10 | < th | dose independent | rect. | 24 | 16 |
| 844 | 63.88 | temperature | 20.0 | 30 | > th | dose independent | rect. | 14 | 23 |
| 864 | 63.90 | temperature | 20.0 | 10 | > th | dose independent | rect. | 24 | 12 |
| 865 | 63.90 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 3 |
| 878 | 63.92 | wind | 1.0 | 4320 | > th | dose independent | rect. | 2 | 3 |
| 907 | 63.94 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 1 | 8 |
| 930 | 63.97 | wind | 1.0 | 43200 | > th | dose independent | rect. | 16 | 8 |
| 973 | 63.99 | radiation | 10.0 | 4320 | > th | dose dependent | rect. | 16 | 15 |
| 976 | 64.00 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 1 | 8 |