Os08g0323000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os08g0323000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 17.92 | 0.199 | 10.7 | 0.415 | 0.205 | 0.185 | 0.401 | -0.781 | 0.313 | 19.1 | 19.15 | 1585 | -- | -- |
| 19.12 | 0.204 | 10.7 | 0.388 | 0.217 | 0.186 | 0.306 | -- | 0.303 | 18.9 | 16.76 | 1674 | -- | -- |
| 18.12 | 0.198 | 10.7 | 0.411 | 0.216 | 0.196 | -- | -0.87 | 0.3 | 18.4 | 19.22 | 1800 | -- | -- |
| 19.46 | 0.205 | 10.7 | 0.375 | 0.229 | 0.193 | -- | -- | 0.302 | 18.7 | 16.74 | 1676 | -- | -- |
| 20.55 | 0.211 | 10.7 | 0.42 | -- | 0.186 | -- | -0.719 | 0.3 | -- | 19.66 | 1541 | -- | -- |
| 20.15 | 0.21 | 10.8 | 0.347 | 0.201 | -- | 0.389 | -- | 0.255 | 19.3 | -- | -- | -- | -- |
| 20.56 | 0.212 | 10.8 | 0.338 | 0.202 | -- | -- | -- | 0.256 | 19.3 | -- | -- | -- | -- |
| 21.63 | 0.217 | 10.7 | 0.367 | -- | 0.184 | -- | -- | 0.299 | -- | 19.52 | 1510 | -- | -- |
| 22.49 | 0.221 | 10.7 | -- | 0.199 | 0.191 | -- | -- | 0.263 | 18.6 | 19.87 | 1773 | -- | -- |
| 22.71 | 0.223 | 10.7 | 0.335 | -- | -- | -- | -- | 0.252 | -- | -- | -- | -- | -- |
| 23.57 | 0.227 | 10.8 | -- | 0.198 | -- | -- | -- | 0.218 | 19.4 | -- | -- | -- | -- |
| 23.02 | 0.223 | 10.7 | -- | -- | 0.322 | -- | -- | 0.206 | -- | 70 | 1348 | -- | -- |
| 25.67 | 0.236 | 10.8 | -- | -- | -- | -- | -- | 0.215 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 16.92 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 2 | 16.94 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 3 | 16.94 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 5 | 17.08 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 4 |
| 8 | 17.10 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 10 | 17.10 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 8 |
| 21 | 17.12 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 9 | 12 |
| 22 | 17.12 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 9 | 14 |
| 28 | 17.13 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 14 | 3 |
| 30 | 17.13 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 9 | 10 |
| 44 | 17.16 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 12 | 7 |
| 68 | 17.17 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 11 | 4 |
| 75 | 17.18 | radiation | 10.0 | 1440 | < th | dose dependent | sin | 19 | NA |
| 86 | 17.19 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 4 |
| 224 | 17.35 | radiation | 10.0 | 1440 | < th | dose independent | sin | 16 | NA |
| 281 | 17.43 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 23 | 5 |
| 290 | 17.45 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 24 | 4 |
| 294 | 17.46 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 1 | 2 |
| 299 | 17.46 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 9 | 4 |
| 305 | 17.47 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 24 | 1 |
| 347 | 17.50 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 23 | 8 |
| 373 | 17.51 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 388 | 17.52 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 454 | 17.55 | wind | 1.0 | 4320 | < th | dose independent | rect. | 6 | 1 |
| 467 | 17.55 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 14 | 1 |
| 502 | 17.59 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 9 | 5 |
| 597 | 17.64 | wind | 1.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 635 | 17.68 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 2 |
| 642 | 17.68 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 11 | 7 |
| 662 | 17.69 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 680 | 17.70 | wind | 1.0 | 4320 | < th | dose dependent | rect. | 6 | 1 |
| 692 | 17.72 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 720 | 17.73 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 16 | 7 |
| 727 | 17.73 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 19 | 7 |
| 767 | 17.76 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 16 | 7 |
| 796 | 17.78 | wind | 1.0 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 797 | 17.78 | wind | 1.0 | 4320 | > th | dose independent | rect. | 6 | 1 |
| 807 | 17.78 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 810 | 17.78 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 11 | 8 |
| 830 | 17.79 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 11 | 6 |
| 892 | 17.81 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 20 | 1 |
| 902 | 17.82 | wind | 3.0 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 960 | 17.85 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 982 | 17.86 | wind | 1.0 | 14400 | > th | dose independent | rect. | 24 | 3 |
| 998 | 17.86 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 8 | 17 |