Os08g0321600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os08g0321600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 359.56 | 0.891 | 6.34 | -1.12 | 1.81 | -1.25 | 0.815 | -0.0653 | -0.524 | 7.72 | 71.02 | 1256 | -- | -- |
| 359.35 | 0.883 | 6.34 | -1.13 | 1.83 | -1.26 | 0.814 | -- | -0.525 | 7.76 | 71.57 | 1239 | -- | -- |
| 361.21 | 0.885 | 6.34 | -1.1 | 1.83 | -1.26 | -- | -0.0149 | -0.521 | 7.79 | 71.67 | 1239 | -- | -- |
| 361.21 | 0.885 | 6.34 | -1.11 | 1.83 | -1.26 | -- | -- | -0.526 | 7.79 | 71.53 | 1238 | -- | -- |
| 528.22 | 1.07 | 6.39 | -1.04 | -- | -1.25 | -- | 0.28 | -0.474 | -- | 73 | 1344 | -- | -- |
| 415.09 | 0.955 | 6.3 | -0.872 | 1.79 | -- | 0.847 | -- | -0.342 | 7.16 | -- | -- | -- | -- |
| 416.98 | 0.956 | 6.3 | -0.854 | 1.8 | -- | -- | -- | -0.343 | 7.2 | -- | -- | -- | -- |
| 528.07 | 1.07 | 6.39 | -1.06 | -- | -1.28 | -- | -- | -0.496 | -- | 74 | 1347 | -- | -- |
| 391.55 | 0.922 | 6.31 | -- | 1.78 | -1.13 | -- | -- | -0.38 | 7.67 | 73.02 | 1285 | -- | -- |
| 587.42 | 1.13 | 6.34 | -0.821 | -- | -- | -- | -- | -0.312 | -- | -- | -- | -- | -- |
| 436.2 | 0.977 | 6.28 | -- | 1.79 | -- | -- | -- | -0.248 | 7.23 | -- | -- | -- | -- |
| 556.5 | 1.1 | 6.36 | -- | -- | -1.22 | -- | -- | -0.369 | -- | 75 | 1348 | -- | -- |
| 605.22 | 1.15 | 6.32 | -- | -- | -- | -- | -- | -0.221 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 354.52 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 19 | 2 |
| 4 | 355.38 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 6 | 22 |
| 5 | 355.50 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 18 | 5 |
| 16 | 357.20 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 18 | 14 |
| 22 | 358.01 | temperature | 20.0 | 10 | > th | dose independent | rect. | 6 | 22 |
| 37 | 360.11 | humidity | 80.0 | 720 | < th | dose independent | rect. | 19 | 2 |
| 39 | 360.33 | temperature | 20.0 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 54 | 361.85 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 17 | 20 |
| 57 | 362.43 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 58 | 362.47 | humidity | 80.0 | 1440 | < th | dose dependent | sin | 9 | NA |
| 60 | 362.57 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 66 | 363.00 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 17 | 20 |
| 69 | 363.17 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 22 | 3 |
| 72 | 363.23 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 17 | 19 |
| 77 | 363.40 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 22 | 3 |
| 88 | 363.81 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 15 | 21 |
| 98 | 364.17 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 17 | 17 |
| 118 | 364.67 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 6 | 1 |
| 131 | 365.02 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 132 | 365.13 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 4 | 3 |
| 136 | 365.20 | humidity | 70.0 | 1440 | > th | dose independent | sin | 10 | NA |
| 148 | 365.49 | wind | 3.0 | 14400 | < th | dose independent | rect. | 2 | 1 |
| 149 | 365.51 | humidity | 70.0 | 1440 | < th | dose independent | sin | 10 | NA |
| 152 | 365.54 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 17 | 17 |
| 187 | 366.14 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 7 | 1 |
| 188 | 366.14 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 17 | 9 |
| 203 | 366.50 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 2 |
| 212 | 366.66 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 21 | 13 |
| 213 | 366.66 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 11 | 23 |
| 214 | 366.67 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 8 | 15 |
| 218 | 366.73 | humidity | 80.0 | 1440 | < th | dose dependent | no | NA | NA |
| 219 | 366.73 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 6 | 23 |
| 220 | 366.73 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 23 | 23 |
| 224 | 366.75 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 21 | 13 |
| 225 | 366.76 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 24 | 10 |
| 246 | 366.85 | temperature | 20.0 | 30 | > th | dose independent | rect. | 15 | 13 |
| 262 | 366.92 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 272 | 366.99 | humidity | 70.0 | 720 | > th | dose independent | rect. | 16 | 10 |
| 275 | 367.00 | humidity | 90.0 | 1440 | < th | dose dependent | sin | 5 | NA |
| 315 | 367.18 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 325 | 367.25 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 24 | 10 |
| 326 | 367.25 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 327 | 367.25 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 24 | 10 |
| 334 | 367.27 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 24 | 14 |
| 359 | 367.40 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 373 | 367.49 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 2 | 14 |
| 392 | 367.58 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 24 | 10 |
| 396 | 367.59 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 6 | 3 |
| 398 | 367.60 | precipitation | 0.1 | 4320 | > th | dose dependent | sin | 7 | NA |
| 469 | 367.91 | temperature | 20.0 | 1440 | > th | dose independent | sin | 10 | NA |
| 473 | 367.93 | temperature | 20.0 | 1440 | < th | dose independent | sin | 10 | NA |
| 506 | 368.05 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 23 | 4 |
| 564 | 368.27 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 24 | 14 |
| 565 | 368.27 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 23 | 4 |
| 578 | 368.33 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 24 | 14 |
| 580 | 368.33 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 24 | 14 |
| 583 | 368.35 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 24 | 17 |
| 658 | 368.66 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 19 | 16 |
| 664 | 368.68 | wind | 3.0 | 14400 | < th | dose independent | rect. | 22 | 7 |
| 665 | 368.68 | temperature | 20.0 | 30 | > th | dose independent | rect. | 19 | 9 |
| 687 | 368.81 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 10 | 15 |
| 697 | 368.85 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 24 | 17 |
| 701 | 368.85 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 19 | 13 |
| 706 | 368.86 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 24 | 17 |
| 708 | 368.86 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 24 | 17 |
| 733 | 368.93 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 17 | 1 |
| 767 | 369.04 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 11 | 23 |
| 773 | 369.05 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 22 |
| 781 | 369.07 | humidity | 70.0 | 720 | < th | dose independent | rect. | 18 | 14 |
| 790 | 369.10 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 1 | 20 |
| 809 | 369.13 | precipitation | 0.1 | 4320 | < th | dose independent | sin | 7 | NA |
| 810 | 369.13 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 6 | 15 |
| 821 | 369.13 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 6 | 23 |
| 824 | 369.13 | precipitation | 0.1 | 4320 | < th | dose dependent | sin | 7 | NA |
| 836 | 369.15 | humidity | 70.0 | 1440 | > th | dose independent | no | NA | NA |
| 855 | 369.16 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 872 | 369.18 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 7 | 1 |
| 873 | 369.18 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 18 | 5 |
| 934 | 369.32 | precipitation | 0.1 | 4320 | > th | dose independent | sin | 7 | NA |
| 975 | 369.45 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 6 | 3 |
| 979 | 369.45 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 9 | 19 |
| 993 | 369.51 | wind | 3.0 | 14400 | > th | dose independent | rect. | 22 | 8 |