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Os08g0318500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Sec8 exocyst complex component specific domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.9 (0.0113) R2 : 0.272
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.312 (0.0239) R2dN8 : 0.352 R2N8 : 0.272
σ : 0.213
deviance : 20.91
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
11.17 0.157 10.9 0.127 0.16 0.494 -0.329 0.693 0.361 3.65 3.497 1664 -- --
11.46 0.158 10.9 0.177 0.167 0.429 -0.028 -- 0.369 3.21 4.276 1681 -- --
11.3 0.157 10.9 0.159 0.171 0.455 -- 0.342 0.371 2.85 3.714 1664 -- --
11.42 0.157 10.9 0.183 0.169 0.43 -- -- 0.372 2.7 4.309 1686 -- --
11.65 0.159 10.9 0.193 -- 0.655 -- 0.274 0.381 -- 3.43 1752 -- --
12.93 0.169 10.9 0.137 0.352 -- 0.054 -- 0.32 2.21 -- -- -- --
12.94 0.168 10.9 0.136 0.352 -- -- -- 0.32 2.25 -- -- -- --
11.71 0.159 10.9 0.208 -- 0.635 -- -- 0.391 -- 3.667 1772 -- --
12.2 0.163 10.9 -- 0.186 0.353 -- -- 0.36 2.5 8.201 1699 -- --
20.31 0.211 10.9 0.151 -- -- -- -- 0.329 -- -- -- -- --
13.42 0.171 10.9 -- 0.355 -- -- -- 0.305 2.26 -- -- -- --
12.78 0.167 10.9 -- -- 0.606 -- -- 0.369 -- 4.444 1788 -- --
20.91 0.213 10.9 -- -- -- -- -- 0.312 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 11.22 radiation 10.0 1440 > th dose independent rect. 11 1
2 11.23 radiation 1.0 720 < th dose independent rect. 15 17
4 11.23 radiation 1.0 1440 < th dose dependent rect. 9 8
6 11.24 radiation 1.0 1440 > th dose independent rect. 10 3
8 11.26 wind 9.0 4320 < th dose independent rect. 18 1
11 11.26 radiation 1.0 720 < th dose independent rect. 5 21
16 11.27 humidity 50.0 10 > th dose dependent rect. 12 20
18 11.28 humidity 50.0 10 > th dose dependent rect. 16 16
19 11.29 precipitation 0.1 4320 < th dose independent rect. 13 2
20 11.29 radiation 1.0 720 > th dose independent rect. 17 22
21 11.29 precipitation 0.1 4320 < th dose dependent rect. 13 2
22 11.30 radiation 1.0 720 < th dose independent sin 12 NA
30 11.31 precipitation 0.1 4320 > th dose independent rect. 13 2
32 11.31 radiation 1.0 720 < th dose independent rect. 14 22
35 11.31 humidity 50.0 10 > th dose dependent rect. 14 18
36 11.32 radiation 1.0 720 > th dose independent sin 2 NA
37 11.32 radiation 1.0 720 < th dose independent rect. 11 21
40 11.32 precipitation 0.1 4320 > th dose dependent rect. 13 2
61 11.35 radiation 1.0 720 < th dose independent rect. 5 16
63 11.35 radiation 1.0 720 > th dose independent rect. 15 23
80 11.36 radiation 1.0 720 < th dose independent rect. 20 23
83 11.37 radiation 1.0 720 < th dose independent rect. 5 18
84 11.37 radiation 1.0 720 < th dose independent rect. 3 23
110 11.39 radiation 1.0 1440 < th dose dependent sin 23 NA
121 11.40 radiation 1.0 720 > th dose independent rect. 13 23
126 11.41 radiation 1.0 1440 > th dose independent sin 22 NA
128 11.41 radiation 1.0 720 > th dose independent no NA NA
129 11.41 radiation 1.0 720 < th dose independent no NA NA
134 11.41 radiation 1.0 720 > th dose independent rect. 5 14
193 11.41 atmosphere 1010.0 270 < th dose dependent rect. 23 8
201 11.42 radiation 1.0 1440 < th dose independent sin 22 NA
203 11.42 radiation 1.0 1440 < th dose independent rect. 11 2
205 11.42 radiation 1.0 720 < th dose independent rect. 5 14
208 11.42 radiation 10.0 1440 < th dose dependent rect. 13 1
209 11.42 radiation 1.0 1440 < th dose dependent rect. 11 2
210 11.42 radiation 10.0 1440 < th dose dependent rect. 10 4
212 11.42 atmosphere 1010.0 90 < th dose dependent rect. 1 8
213 11.42 radiation 1.0 1440 < th dose dependent rect. 7 13
225 11.43 radiation 1.0 1440 > th dose independent rect. 7 12
249 11.44 radiation 1.0 720 > th dose independent sin 11 NA
258 11.44 radiation 1.0 720 < th dose independent rect. 1 23
280 11.45 radiation 1.0 1440 < th dose independent rect. 7 14
297 11.45 radiation 20.0 1440 < th dose dependent rect. 11 1
301 11.45 atmosphere 1010.0 270 < th dose dependent rect. 1 6
303 11.45 radiation 1.0 720 < th dose dependent rect. 5 14
313 11.45 radiation 1.0 720 < th dose dependent rect. 5 21
318 11.46 radiation 1.0 1440 > th dose independent rect. 11 8
323 11.46 radiation 1.0 1440 < th dose independent rect. 7 12
336 11.46 humidity 90.0 720 > th dose dependent rect. 20 1
351 11.46 radiation 10.0 720 < th dose dependent rect. 14 17
391 11.48 humidity 90.0 90 > th dose independent rect. 5 4
396 11.48 radiation 1.0 1440 < th dose independent rect. 11 8
421 11.48 radiation 10.0 1440 < th dose dependent sin 18 NA
465 11.49 wind 9.0 4320 > th dose dependent rect. 18 2
516 11.50 radiation 1.0 720 > th dose independent rect. 17 16
622 11.52 humidity 90.0 4320 < th dose independent rect. 13 1
723 11.53 humidity 90.0 720 > th dose independent rect. 20 1
724 11.53 precipitation 0.1 270 > th dose independent rect. 1 3
764 11.54 humidity 70.0 1440 > th dose independent rect. 11 4
769 11.54 radiation 1.0 90 < th dose independent rect. 5 10
786 11.54 humidity 90.0 720 > th dose dependent rect. 20 3
802 11.54 radiation 1.0 1440 < th dose dependent rect. 20 22
803 11.54 humidity 50.0 10 > th dose dependent rect. 12 23
855 11.55 precipitation 0.1 270 > th dose dependent rect. 1 3
993 11.56 precipitation 0.1 4320 > th dose dependent rect. 19 2