Os08g0310100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ribosomal protein L15 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os08g0310100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Ribosomal protein L15 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 44.87 | 0.315 | 11.5 | 1.59 | 1.89 | 0.605 | 0.13 | 0.0296 | 0.308 | 17.6 | 24.36 | 544 | -- | -- |
| 44.87 | 0.312 | 11.5 | 1.59 | 1.89 | 0.603 | 0.123 | -- | 0.308 | 17.6 | 24.3 | 528 | -- | -- |
| 44.91 | 0.312 | 11.5 | 1.59 | 1.89 | 0.604 | -- | 0.00327 | 0.309 | 17.6 | 24.3 | 528 | -- | -- |
| 44.91 | 0.312 | 11.5 | 1.59 | 1.89 | 0.604 | -- | -- | 0.309 | 17.6 | 24.3 | 528 | -- | -- |
| 210.13 | 0.679 | 11.5 | 1.29 | -- | -1.02 | -- | -0.795 | 0.0368 | -- | 33.85 | 1261 | -- | -- |
| 50.1 | 0.332 | 11.5 | 1.43 | 1.85 | -- | 0.133 | -- | 0.194 | 17.5 | -- | -- | -- | -- |
| 50.14 | 0.332 | 11.5 | 1.43 | 1.85 | -- | -- | -- | 0.194 | 17.5 | -- | -- | -- | -- |
| 210.7 | 0.679 | 11.5 | 1.18 | -- | -1.07 | -- | -- | 0.00606 | -- | 39.36 | 1272 | -- | -- |
| 102.54 | 0.472 | 11.6 | -- | 1.74 | -0.403 | -- | -- | -0.0138 | 17.7 | 63.91 | 65 | -- | -- |
| 227.38 | 0.705 | 11.5 | 1.37 | -- | -- | -- | -- | 0.149 | -- | -- | -- | -- | -- |
| 104.37 | 0.478 | 11.5 | -- | 1.82 | -- | -- | -- | 0.0344 | 17.5 | -- | -- | -- | -- |
| 220.57 | 0.692 | 11.6 | -- | -- | -1.88 | -- | -- | -0.214 | -- | 102.7 | 269 | -- | -- |
| 277.15 | 0.777 | 11.5 | -- | -- | -- | -- | -- | -0.00316 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 38.67 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 2 |
| 2 | 38.78 | wind | 5.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 4 | 39.15 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 3 | 5 |
| 5 | 39.22 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 22 |
| 9 | 39.45 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 2 |
| 10 | 39.45 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 12 | 39.49 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 13 | 39.53 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 22 |
| 15 | 39.53 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 22 |
| 16 | 39.54 | wind | 5.0 | 90 | < th | dose independent | rect. | 3 | 5 |
| 18 | 39.57 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 20 | 39.57 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 21 | 39.57 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 24 | 39.57 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 25 | 39.57 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 27 | 39.57 | radiation | 20.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 30 | 39.57 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 22 |
| 35 | 39.58 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 38 | 39.69 | wind | 1.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 40 | 39.72 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 8 | 19 |
| 41 | 39.72 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 8 | 19 |
| 47 | 39.94 | wind | 9.0 | 90 | < th | dose independent | rect. | 8 | 19 |
| 48 | 39.96 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 9 | 19 |
| 50 | 39.99 | wind | 9.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 52 | 40.04 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 5 |
| 53 | 40.04 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 3 | 2 |
| 54 | 40.04 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 5 |
| 57 | 40.08 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 1 | 6 |
| 60 | 40.13 | temperature | 10.0 | 90 | > th | dose independent | rect. | 3 | 5 |
| 62 | 40.13 | temperature | 30.0 | 90 | < th | dose independent | rect. | 3 | 5 |
| 63 | 40.13 | humidity | 50.0 | 90 | > th | dose independent | rect. | 3 | 5 |
| 65 | 40.13 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 3 | 5 |
| 66 | 40.13 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 3 | 5 |
| 67 | 40.13 | temperature | 10.0 | 90 | > th | dose independent | rect. | 8 | 19 |
| 69 | 40.16 | radiation | 40.0 | 90 | < th | dose independent | rect. | 3 | 5 |
| 71 | 40.19 | wind | 9.0 | 90 | < th | dose dependent | rect. | 3 | 5 |
| 74 | 40.25 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 3 | 6 |
| 84 | 40.36 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 4 | 1 |
| 95 | 40.44 | wind | 5.0 | 10 | < th | dose independent | rect. | 4 | 5 |
| 98 | 40.45 | atmosphere | 1005.0 | 90 | > th | dose dependent | rect. | 3 | 5 |
| 132 | 40.61 | wind | 9.0 | 10 | < th | dose independent | rect. | 9 | 19 |
| 135 | 40.62 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 8 | 19 |
| 141 | 40.65 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 3 | 15 |
| 148 | 40.73 | wind | 9.0 | 10 | < th | dose dependent | rect. | 4 | 5 |
| 150 | 40.74 | wind | 7.0 | 270 | < th | dose independent | rect. | 6 | 20 |
| 165 | 40.79 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 4 | 5 |
| 167 | 40.79 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 4 | 5 |
| 170 | 40.80 | temperature | 10.0 | 10 | > th | dose independent | rect. | 4 | 5 |
| 172 | 40.80 | temperature | 30.0 | 10 | < th | dose independent | rect. | 4 | 5 |
| 173 | 40.80 | humidity | 50.0 | 10 | > th | dose independent | rect. | 4 | 5 |
| 175 | 40.80 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 4 | 5 |
| 176 | 40.80 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 4 | 5 |
| 177 | 40.80 | temperature | 10.0 | 10 | > th | dose independent | rect. | 9 | 19 |
| 180 | 40.80 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 4 | 4 |
| 221 | 40.94 | radiation | 40.0 | 10 | < th | dose independent | rect. | 4 | 5 |
| 278 | 41.12 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 9 | 19 |
| 282 | 41.14 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 3 | 5 |
| 320 | 41.18 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 3 | 5 |
| 330 | 41.23 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 3 | 11 |
| 332 | 41.24 | wind | 5.0 | 270 | < th | dose independent | rect. | 1 | 6 |
| 339 | 41.25 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 14 |
| 360 | 41.30 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 22 | 4 |
| 374 | 41.36 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 5 |
| 377 | 41.36 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 5 | 5 |
| 378 | 41.36 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 5 | 5 |
| 379 | 41.36 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 10 | 19 |
| 383 | 41.36 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 407 | 41.43 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 419 | 41.44 | wind | 9.0 | 90 | < th | dose dependent | rect. | 8 | 19 |
| 438 | 41.46 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 23 | 2 |
| 496 | 41.55 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 10 | 21 |
| 521 | 41.61 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 11 |
| 527 | 41.62 | wind | 9.0 | 1440 | < th | dose independent | rect. | 5 | 4 |
| 531 | 41.62 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 5 | 4 |
| 540 | 41.62 | temperature | 20.0 | 30 | > th | dose independent | rect. | 12 | 21 |
| 543 | 41.63 | temperature | 15.0 | 270 | > th | dose independent | rect. | 10 | 21 |
| 546 | 41.64 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 4 | 5 |
| 578 | 41.71 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 19 | 3 |
| 583 | 41.72 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 16 | 10 |
| 584 | 41.72 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 18 | 10 |
| 586 | 41.73 | temperature | 25.0 | 10 | > th | dose independent | rect. | 1 | 6 |
| 591 | 41.74 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 5 | 22 |
| 620 | 41.82 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 3 | 5 |
| 665 | 41.88 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 19 | 11 |
| 679 | 41.91 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 6 |
| 684 | 41.91 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 6 |
| 695 | 41.93 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 13 | 19 |
| 708 | 41.95 | wind | 7.0 | 270 | < th | dose independent | rect. | 16 | 10 |
| 736 | 41.97 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 20 | 8 |
| 759 | 42.00 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 6 |
| 761 | 42.00 | temperature | 30.0 | 270 | < th | dose independent | rect. | 1 | 6 |
| 762 | 42.00 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 6 |
| 764 | 42.00 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 6 |
| 771 | 42.00 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 20 |
| 795 | 42.03 | temperature | 15.0 | 90 | > th | dose independent | rect. | 13 | 19 |
| 840 | 42.09 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 11 | 11 |
| 845 | 42.10 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 16 | 10 |
| 847 | 42.10 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 16 | 10 |
| 853 | 42.12 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 12 | 21 |
| 855 | 42.12 | wind | 9.0 | 270 | < th | dose dependent | rect. | 1 | 6 |
| 887 | 42.16 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 3 |
| 889 | 42.16 | radiation | 40.0 | 90 | < th | dose independent | rect. | 13 | 19 |
| 890 | 42.16 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 3 |
| 893 | 42.17 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 3 |
| 894 | 42.17 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 3 |
| 895 | 42.17 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 3 |
| 896 | 42.17 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 3 |
| 918 | 42.20 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 3 |
| 937 | 42.21 | wind | 9.0 | 270 | < th | dose dependent | rect. | 7 | 3 |
| 948 | 42.23 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 19 | 5 |
| 961 | 42.26 | temperature | 15.0 | 270 | > th | dose independent | rect. | 11 | 11 |
| 972 | 42.29 | radiation | 1.0 | 270 | > th | dose independent | rect. | 7 | 3 |
| 982 | 42.30 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 3 | 5 |
| 990 | 42.32 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 21 | 1 |