Os08g0299200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Adenylate cyclase domain containing protein.
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Os08g0299200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Adenylate cyclase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 236.41 | 0.722 | 8.15 | -0.0827 | 1.9 | 0.401 | 0.25 | -15.6 | -0.794 | 8.51 | 29.82 | 655 | -- | -- |
| 281.15 | 0.787 | 8.36 | -1.44 | 1.63 | -0.339 | -0.891 | -- | -1.02 | 8.48 | 29.82 | 655 | -- | -- |
| 235.67 | 0.715 | 8.15 | -0.184 | 1.93 | 0.397 | -- | -16 | -0.824 | 8.41 | 29.95 | 609 | -- | -- |
| 248.79 | 0.735 | 8.33 | -1.62 | 2.02 | -1.47 | -- | -- | -0.912 | 8.21 | 30.2 | 539 | -- | -- |
| 368.74 | 0.894 | 8.14 | 0.871 | -- | 1.86 | -- | -15.7 | -0.548 | -- | 29.4 | 790 | -- | -- |
| 285.31 | 0.792 | 8.36 | -1.4 | 1.62 | -- | -0.877 | -- | -1.02 | 8.72 | -- | -- | -- | -- |
| 287.82 | 0.794 | 8.36 | -1.43 | 1.62 | -- | -- | -- | -1.02 | 8.77 | -- | -- | -- | -- |
| 430.19 | 0.97 | 8.41 | -1.48 | -- | -0.338 | -- | -- | -1.03 | -- | 29.4 | 790 | -- | -- |
| 315.71 | 0.828 | 8.29 | -- | 1.89 | -1.14 | -- | -- | -0.755 | 8.46 | 31.39 | 547 | -- | -- |
| 436.47 | 0.976 | 8.4 | -1.43 | -- | -- | -- | -- | -1.01 | -- | -- | -- | -- | -- |
| 341.66 | 0.865 | 8.32 | -- | 1.62 | -- | -- | -- | -0.861 | 8.84 | -- | -- | -- | -- |
| 431.5 | 0.967 | 8.3 | -- | -- | 1.09 | -- | -- | -0.567 | -- | 25.85 | 660 | -- | -- |
| 490.19 | 1.03 | 8.37 | -- | -- | -- | -- | -- | -0.849 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 225.08 | humidity | 60 | 14400 | < th | dose independent | rect. | 11 | 2 |
| 5 | 227.44 | humidity | 60 | 14400 | < th | dose independent | rect. | 19 | 19 |
| 7 | 227.49 | humidity | 60 | 14400 | > th | dose independent | rect. | 10 | 3 |
| 8 | 227.50 | humidity | 60 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 26 | 228.88 | humidity | 70 | 14400 | < th | dose dependent | rect. | 10 | 3 |
| 27 | 229.05 | humidity | 60 | 14400 | > th | dose independent | rect. | 19 | 19 |
| 34 | 229.22 | humidity | 60 | 14400 | > th | dose independent | rect. | 23 | 14 |
| 45 | 229.25 | humidity | 60 | 14400 | > th | dose independent | rect. | 4 | 10 |
| 63 | 229.52 | humidity | 70 | 14400 | < th | dose dependent | rect. | 10 | 1 |
| 107 | 230.32 | humidity | 70 | 14400 | < th | dose dependent | rect. | 19 | 19 |
| 142 | 231.03 | humidity | 60 | 14400 | < th | dose independent | sin | 4 | NA |
| 149 | 231.19 | humidity | 60 | 14400 | > th | dose independent | sin | 6 | NA |
| 181 | 231.27 | humidity | 70 | 14400 | < th | dose dependent | sin | 5 | NA |
| 351 | 232.95 | humidity | 60 | 14400 | < th | dose independent | rect. | 10 | 23 |
| 360 | 233.10 | humidity | 60 | 14400 | < th | dose independent | rect. | 10 | 10 |
| 376 | 233.18 | humidity | 60 | 14400 | < th | dose independent | rect. | 8 | 12 |
| 405 | 233.22 | humidity | 60 | 14400 | < th | dose independent | no | NA | NA |
| 557 | 233.46 | humidity | 70 | 14400 | < th | dose independent | sin | 9 | NA |
| 579 | 233.51 | humidity | 70 | 14400 | < th | dose dependent | rect. | 7 | 14 |
| 592 | 233.52 | humidity | 70 | 14400 | < th | dose dependent | no | NA | NA |
| 693 | 233.77 | humidity | 70 | 14400 | < th | dose dependent | rect. | 10 | 23 |
| 730 | 233.97 | humidity | 60 | 14400 | > th | dose independent | rect. | 10 | 23 |
| 732 | 233.98 | humidity | 60 | 14400 | > th | dose independent | rect. | 8 | 18 |
| 734 | 233.98 | humidity | 60 | 14400 | > th | dose independent | rect. | 8 | 21 |
| 735 | 233.99 | humidity | 60 | 14400 | > th | dose independent | rect. | 8 | 12 |
| 748 | 234.01 | humidity | 60 | 14400 | > th | dose independent | rect. | 23 | 21 |
| 757 | 234.02 | humidity | 60 | 14400 | > th | dose independent | rect. | 4 | 22 |
| 764 | 234.03 | humidity | 60 | 14400 | > th | dose independent | no | NA | NA |
| 768 | 234.03 | humidity | 60 | 14400 | > th | dose independent | rect. | 4 | 16 |
| 819 | 234.13 | humidity | 70 | 14400 | < th | dose dependent | rect. | 12 | 23 |
| 885 | 234.25 | humidity | 50 | 14400 | > th | dose independent | sin | 12 | NA |
| 928 | 234.60 | temperature | 30 | 720 | > th | dose independent | rect. | 9 | 6 |
| 930 | 234.61 | temperature | 30 | 720 | > th | dose independent | rect. | 11 | 4 |
| 961 | 234.89 | humidity | 60 | 14400 | < th | dose dependent | sin | 13 | NA |
| 999 | 235.24 | humidity | 50 | 14400 | > th | dose dependent | rect. | 10 | 1 |