Os08g0299000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF52 domain containing protein.
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Os08g0299000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF52 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 20.57 | 0.213 | 11.1 | -0.677 | 0.461 | -0.576 | 0.427 | 0.0527 | -0.509 | 9.27 | 69.38 | 1141 | -- | -- |
| 20.48 | 0.211 | 11.1 | -0.672 | 0.551 | -0.59 | 0.455 | -- | -0.511 | 9.15 | 69.32 | 1003 | -- | -- |
| 20.99 | 0.213 | 11.1 | -0.689 | 0.564 | -0.571 | -- | 0.302 | -0.508 | 9.02 | 68.35 | 972 | -- | -- |
| 21.12 | 0.214 | 11.1 | -0.651 | 0.575 | -0.571 | -- | -- | -0.501 | 8.96 | 70.98 | 945 | -- | -- |
| 31.57 | 0.262 | 11.1 | -0.623 | -- | -0.324 | -- | -0.101 | -0.481 | -- | 64.07 | 2930 | -- | -- |
| 25.51 | 0.237 | 11.1 | -0.673 | 0.376 | -- | 0.351 | -- | -0.445 | 8.34 | -- | -- | -- | -- |
| 25.88 | 0.238 | 11.1 | -0.663 | 0.377 | -- | -- | -- | -0.446 | 8.18 | -- | -- | -- | -- |
| 31.47 | 0.261 | 11.1 | -0.66 | -- | -0.353 | -- | -- | -0.514 | -- | 65.3 | 2903 | -- | -- |
| 31.8 | 0.263 | 11.1 | -- | 0.584 | -0.606 | -- | -- | -0.442 | 9.03 | 79.77 | 908 | -- | -- |
| 33.71 | 0.271 | 11.1 | -0.66 | -- | -- | -- | -- | -0.442 | -- | -- | -- | -- | -- |
| 37.46 | 0.286 | 11.1 | -- | 0.374 | -- | -- | -- | -0.372 | 8.3 | -- | -- | -- | -- |
| 39.42 | 0.292 | 11.1 | -- | -- | -0.645 | -- | -- | -0.454 | -- | 80 | 1436 | -- | -- |
| 45.19 | 0.314 | 11.1 | -- | -- | -- | -- | -- | -0.368 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 20.22 | humidity | 80 | 1440 | > th | dose independent | rect. | 22 | 18 |
| 6 | 20.29 | humidity | 80 | 1440 | < th | dose independent | rect. | 21 | 19 |
| 18 | 20.46 | humidity | 80 | 1440 | < th | dose independent | rect. | 10 | 5 |
| 22 | 20.48 | humidity | 80 | 1440 | > th | dose independent | rect. | 10 | 5 |
| 27 | 20.51 | humidity | 70 | 1440 | > th | dose dependent | rect. | 10 | 4 |
| 43 | 20.62 | humidity | 70 | 1440 | > th | dose dependent | rect. | 23 | 17 |
| 131 | 20.93 | humidity | 80 | 1440 | > th | dose independent | rect. | 9 | 23 |
| 138 | 20.94 | humidity | 80 | 1440 | < th | dose independent | rect. | 9 | 23 |
| 150 | 20.96 | humidity | 70 | 720 | > th | dose dependent | rect. | 14 | 15 |
| 151 | 20.96 | humidity | 70 | 720 | > th | dose dependent | rect. | 10 | 19 |
| 180 | 21.01 | humidity | 70 | 720 | > th | dose dependent | sin | 13 | NA |
| 181 | 21.01 | humidity | 60 | 720 | > th | dose dependent | rect. | 18 | 10 |
| 188 | 21.02 | humidity | 80 | 1440 | < th | dose independent | sin | 2 | NA |
| 209 | 21.04 | humidity | 80 | 1440 | > th | dose independent | sin | 1 | NA |
| 268 | 21.10 | humidity | 80 | 1440 | < th | dose independent | no | NA | NA |
| 279 | 21.11 | humidity | 80 | 1440 | > th | dose independent | no | NA | NA |
| 283 | 21.11 | humidity | 80 | 1440 | < th | dose independent | rect. | 5 | 23 |
| 307 | 21.13 | humidity | 80 | 1440 | > th | dose independent | rect. | 5 | 23 |
| 323 | 21.14 | humidity | 80 | 1440 | < th | dose independent | rect. | 1 | 23 |
| 328 | 21.14 | humidity | 90 | 720 | > th | dose dependent | rect. | 8 | 17 |
| 336 | 21.15 | humidity | 80 | 1440 | > th | dose independent | rect. | 1 | 23 |
| 338 | 21.15 | humidity | 80 | 1440 | < th | dose independent | rect. | 13 | 23 |
| 358 | 21.16 | humidity | 80 | 1440 | > th | dose independent | rect. | 13 | 23 |
| 441 | 21.21 | humidity | 70 | 1440 | > th | dose dependent | sin | 2 | NA |
| 442 | 21.21 | humidity | 70 | 1440 | > th | dose dependent | no | NA | NA |
| 494 | 21.24 | humidity | 90 | 720 | < th | dose dependent | rect. | 19 | 12 |
| 506 | 21.24 | humidity | 70 | 1440 | > th | dose dependent | rect. | 5 | 23 |
| 558 | 21.27 | humidity | 70 | 1440 | > th | dose dependent | rect. | 2 | 23 |
| 667 | 21.33 | humidity | 90 | 720 | < th | dose dependent | sin | 12 | NA |
| 690 | 21.34 | humidity | 90 | 720 | < th | dose dependent | rect. | 19 | 9 |
| 770 | 21.38 | humidity | 90 | 720 | > th | dose dependent | rect. | 12 | 14 |
| 785 | 21.39 | humidity | 90 | 720 | > th | dose dependent | sin | 18 | NA |
| 843 | 21.42 | humidity | 80 | 720 | > th | dose independent | rect. | 14 | 14 |
| 911 | 21.44 | humidity | 90 | 720 | < th | dose dependent | rect. | 19 | 6 |
| 930 | 21.45 | humidity | 90 | 720 | > th | dose independent | rect. | 18 | 8 |
| 936 | 21.45 | humidity | 80 | 720 | < th | dose independent | rect. | 13 | 19 |
| 967 | 21.46 | humidity | 90 | 720 | > th | dose dependent | rect. | 18 | 7 |