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Os08g0290400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.87 (0.0165) R2 : 0.406
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.742 (0.0424) R2dC : 0.402 R2C : 0.395
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0868 (0.0346) R2dN8 : 0.0106 R2N8 : 0.0037
σ : 0.31
deviance : 43.9
__
_____
C
peak time of C : 7.57
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
27.27 0.245 9.84 -0.395 0.754 0.0853 0.0185 -1.08 -0.078 7.5 1012 5872 -- --
30.13 0.256 9.87 -0.549 0.748 0.217 0.208 -- -0.118 7.49 1012 38992 -- --
27.27 0.243 9.84 -0.389 0.754 0.0856 -- -1.08 -0.0774 7.5 1012 5851 -- --
28.97 0.251 9.89 -0.6 0.754 0.31 -- -- -0.165 7.46 1020 36487 -- --
57.65 0.354 9.86 -0.396 -- 0.0583 -- -1.04 -0.071 -- 1012 5960 -- --
31.26 0.262 9.88 -0.694 0.748 -- 0.101 -- -0.164 7.51 -- -- -- --
31.28 0.262 9.88 -0.692 0.748 -- -- -- -0.164 7.51 -- -- -- --
58.67 0.357 9.87 -0.38 -- 0.513 -- -- -0.0391 -- 1016 36140 -- --
35.22 0.276 9.85 -- 0.743 0.524 -- -- -0.0356 7.54 1019 47520 -- --
61.22 0.366 9.9 -0.68 -- -- -- -- -0.152 -- -- -- -- --
43.9 0.31 9.87 -- 0.742 -- -- -- -0.0868 7.57 -- -- -- --
61.56 0.365 9.87 -- -- 0.622 -- -- 0.0195 -- 1016 42045 -- --
73.43 0.4 9.88 -- -- -- -- -- -0.0767 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 26.51 humidity 80 43200 > th dose independent rect. 17 7
5 26.80 humidity 80 43200 < th dose independent rect. 17 7
19 27.04 wind 5 4320 < th dose independent rect. 15 1
24 27.07 wind 9 14400 > th dose dependent rect. 19 20
25 27.08 humidity 80 14400 < th dose independent rect. 23 1
28 27.09 wind 1 43200 < th dose dependent rect. 12 14
32 27.13 wind 1 43200 < th dose independent rect. 23 3
36 27.15 radiation 10 14400 > th dose independent rect. 5 1
52 27.18 humidity 80 14400 > th dose independent rect. 3 1
56 27.20 wind 5 4320 > th dose independent rect. 15 1
63 27.24 wind 1 43200 > th dose independent rect. 2 1
67 27.24 humidity 80 43200 > th dose independent rect. 16 16
80 27.28 wind 1 43200 < th dose dependent rect. 8 18
97 27.33 humidity 80 43200 > th dose independent sin 14 NA
98 27.33 humidity 80 43200 < th dose independent sin 13 NA
103 27.34 humidity 70 720 > th dose independent rect. 19 10
105 27.34 humidity 70 720 > th dose independent rect. 18 13
111 27.35 wind 9 14400 > th dose independent rect. 19 19
114 27.37 wind 9 14400 < th dose independent rect. 13 1
123 27.39 humidity 50 720 > th dose dependent rect. 19 2
131 27.43 humidity 80 14400 < th dose independent rect. 3 1
132 27.43 wind 9 14400 < th dose independent rect. 19 19
141 27.44 humidity 90 43200 < th dose dependent rect. 20 2
145 27.45 humidity 90 43200 < th dose dependent rect. 19 4
146 27.46 wind 1 43200 > th dose independent rect. 23 3
150 27.47 wind 1 43200 < th dose independent rect. 21 5
151 27.47 wind 9 14400 > th dose dependent rect. 22 17
162 27.49 radiation 1 1440 < th dose dependent rect. 18 3
163 27.49 radiation 1 1440 < th dose dependent rect. 18 5
167 27.50 humidity 70 720 > th dose independent rect. 19 2
174 27.51 wind 1 43200 < th dose dependent rect. 2 1
175 27.51 wind 3 43200 < th dose dependent rect. 20 1
176 27.51 radiation 1 1440 < th dose dependent rect. 18 1
187 27.53 humidity 60 43200 > th dose dependent rect. 19 3
191 27.54 wind 1 43200 < th dose independent rect. 14 12
199 27.55 humidity 60 43200 > th dose dependent rect. 20 1
209 27.56 humidity 60 14400 < th dose dependent rect. 18 16
234 27.60 humidity 50 14400 < th dose dependent rect. 16 20
238 27.61 wind 5 14400 > th dose dependent rect. 15 1
246 27.63 wind 1 43200 < th dose independent rect. 2 1
247 27.63 temperature 25 720 < th dose independent rect. 1 2
251 27.63 wind 9 14400 < th dose independent rect. 22 16
254 27.63 humidity 80 14400 < th dose dependent rect. 3 1
274 27.65 radiation 20 14400 > th dose dependent rect. 17 14
280 27.66 humidity 80 14400 < th dose dependent rect. 22 6
293 27.68 humidity 80 14400 < th dose independent rect. 22 10
308 27.69 temperature 30 720 < th dose independent rect. 18 13
311 27.69 wind 1 43200 < th dose dependent sin 17 NA
313 27.69 radiation 20 14400 > th dose dependent rect. 6 1
340 27.71 wind 1 43200 < th dose dependent rect. 23 3
351 27.72 wind 7 14400 > th dose dependent sin 5 NA
357 27.72 humidity 80 14400 < th dose dependent rect. 22 10
362 27.73 humidity 80 14400 > th dose independent rect. 23 6
364 27.73 humidity 80 14400 > th dose independent rect. 22 9
369 27.73 temperature 20 1440 > th dose dependent rect. 16 1
393 27.75 humidity 80 14400 < th dose independent rect. 3 5
417 27.77 wind 9 14400 > th dose independent sin 7 NA
421 27.77 humidity 80 14400 < th dose independent rect. 23 7
426 27.77 wind 9 14400 > th dose dependent sin 7 NA
448 27.78 wind 1 43200 > th dose dependent rect. 15 1
458 27.79 humidity 50 14400 < th dose dependent rect. 10 1
478 27.80 wind 1 43200 < th dose dependent rect. 21 5
495 27.81 humidity 50 14400 < th dose dependent sin 10 NA
496 27.81 wind 9 43200 < th dose dependent rect. 15 1
524 27.83 wind 9 14400 < th dose independent sin 7 NA
535 27.83 wind 3 43200 < th dose dependent rect. 18 5
559 27.83 radiation 1 720 < th dose dependent rect. 4 18
561 27.84 wind 1 43200 > th dose independent rect. 14 1
575 27.84 wind 1 43200 < th dose dependent rect. 19 7
613 27.86 humidity 70 14400 > th dose independent rect. 20 1
614 27.86 humidity 70 14400 < th dose independent rect. 20 1
633 27.86 humidity 80 43200 < th dose dependent sin 11 NA
634 27.86 humidity 70 14400 < th dose dependent rect. 20 1
672 27.87 humidity 50 14400 < th dose dependent rect. 13 23
681 27.88 wind 1 43200 > th dose independent rect. 14 12
694 27.88 radiation 1 720 < th dose dependent rect. 4 21
697 27.89 wind 9 14400 > th dose independent rect. 22 16
713 27.90 radiation 30 43200 > th dose independent rect. 11 1
739 27.91 radiation 30 14400 < th dose independent rect. 16 15
742 27.91 humidity 70 43200 < th dose independent rect. 20 21
744 27.91 temperature 30 43200 > th dose dependent rect. 8 1
774 27.92 humidity 50 14400 > th dose independent rect. 18 17
796 27.93 radiation 20 4320 > th dose independent rect. 11 1
803 27.93 humidity 70 43200 > th dose independent rect. 20 21
825 27.93 wind 9 14400 > th dose dependent rect. 13 22
829 27.94 humidity 50 14400 < th dose independent rect. 10 2
834 27.94 humidity 70 43200 > th dose independent rect. 12 14
842 27.94 wind 1 43200 < th dose dependent rect. 11 1
871 27.95 humidity 50 14400 < th dose dependent sin 16 NA
932 27.97 wind 9 14400 < th dose independent rect. 2 12
948 27.97 humidity 50 14400 < th dose dependent no NA NA
956 27.97 humidity 50 14400 < th dose dependent rect. 9 9