Os08g0288500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : D111/G-patch domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os08g0288500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : D111/G-patch domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 38.32 | 0.291 | 12.7 | 0.59 | 0.249 | -1.31 | 0.349 | 3.14 | 0.0434 | 4.89 | 18.3 | 3652 | -- | -- |
| 49.98 | 0.329 | 12.7 | 0.562 | 0.291 | -1.6 | 0.0923 | -- | 0.14 | 6.11 | 11.21 | 21301 | -- | -- |
| 38.5 | 0.289 | 12.7 | 0.595 | 0.261 | -1.31 | -- | 3.19 | 0.0457 | 5.52 | 18.31 | 3675 | -- | -- |
| 49.67 | 0.328 | 12.7 | 0.428 | 0.292 | -1.53 | -- | -- | 0.0986 | 6.54 | 10.99 | 21278 | -- | -- |
| 41.76 | 0.301 | 12.7 | 0.608 | -- | -1.3 | -- | 3.21 | 0.0537 | -- | 18.44 | 3490 | -- | -- |
| 82.79 | 0.427 | 12.8 | -0.794 | 0.268 | -- | -0.387 | -- | -0.457 | 7.87 | -- | -- | -- | -- |
| 83.07 | 0.427 | 12.8 | -0.806 | 0.278 | -- | -- | -- | -0.458 | 7.15 | -- | -- | -- | -- |
| 49.12 | 0.326 | 12.8 | -0.177 | -- | -1.47 | -- | -- | -0.158 | -- | 11.09 | 3572 | -- | -- |
| 46.15 | 0.316 | 12.7 | -- | 0.282 | -1.52 | -- | -- | -0.0458 | 6.69 | 8.272 | 7435 | -- | -- |
| 87.14 | 0.436 | 12.8 | -0.801 | -- | -- | -- | -- | -0.453 | -- | -- | -- | -- | -- |
| 100.19 | 0.468 | 12.8 | -- | 0.27 | -- | -- | -- | -0.369 | 7.34 | -- | -- | -- | -- |
| 49.79 | 0.329 | 12.8 | -- | -- | -1.57 | -- | -- | -0.136 | -- | 11.01 | 3580 | -- | -- |
| 104.06 | 0.476 | 12.8 | -- | -- | -- | -- | -- | -0.365 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 34.70 | temperature | 20 | 720 | > th | dose dependent | rect. | 20 | 17 |
| 5 | 35.46 | temperature | 20 | 720 | > th | dose dependent | sin | 7 | NA |
| 6 | 35.47 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 2 |
| 7 | 35.54 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 8 | 35.56 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 2 |
| 20 | 35.77 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 39 | 35.97 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 66 | 36.11 | temperature | 15 | 1440 | > th | dose dependent | rect. | 21 | 10 |
| 123 | 36.41 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 174 | 36.57 | temperature | 20 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 190 | 36.66 | temperature | 20 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 214 | 36.79 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 3 |
| 247 | 36.90 | temperature | 30 | 720 | < th | dose dependent | rect. | 21 | 16 |
| 311 | 37.22 | temperature | 15 | 1440 | > th | dose dependent | sin | 10 | NA |
| 329 | 37.30 | temperature | 20 | 4320 | > th | dose dependent | rect. | 9 | 1 |
| 376 | 37.49 | temperature | 30 | 720 | < th | dose dependent | sin | 7 | NA |
| 401 | 37.60 | temperature | 30 | 1440 | < th | dose dependent | sin | 10 | NA |
| 445 | 37.81 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 536 | 38.11 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 10 |
| 554 | 38.20 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 10 |
| 611 | 38.42 | temperature | 25 | 4320 | < th | dose independent | rect. | 10 | 3 |
| 622 | 38.46 | temperature | 25 | 4320 | < th | dose independent | rect. | 8 | 7 |
| 678 | 38.62 | temperature | 25 | 4320 | > th | dose independent | rect. | 10 | 4 |
| 681 | 38.63 | humidity | 90 | 43200 | > th | dose independent | rect. | 9 | 2 |
| 688 | 38.66 | humidity | 90 | 43200 | < th | dose independent | rect. | 9 | 2 |
| 696 | 38.68 | temperature | 25 | 4320 | > th | dose independent | rect. | 9 | 6 |
| 715 | 38.73 | temperature | 25 | 4320 | > th | dose independent | rect. | 7 | 9 |
| 813 | 38.98 | humidity | 80 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 846 | 39.05 | humidity | 90 | 43200 | > th | dose independent | rect. | 7 | 4 |
| 855 | 39.06 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 13 |
| 892 | 39.15 | temperature | 20 | 4320 | > th | dose dependent | sin | 2 | NA |
| 911 | 39.20 | temperature | 20 | 4320 | > th | dose dependent | rect. | 7 | 15 |
| 962 | 39.27 | humidity | 90 | 43200 | > th | dose dependent | rect. | 4 | 12 |
| 989 | 39.32 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 13 |