Os08g0280200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : C2 calcium/lipid-binding region, CaLB domain containing protein.
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Os08g0280200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : C2 calcium/lipid-binding region, CaLB domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 92.96 | 0.453 | 6.28 | -0.163 | 0.512 | 1.27 | 0.536 | -1.09 | -0.106 | 3.02 | 94 | 97 | -- | -- |
| 93.59 | 0.451 | 6.28 | -0.163 | 0.501 | 1.23 | 0.347 | -- | -0.108 | 2.99 | 93.9 | 118 | -- | -- |
| 93.7 | 0.451 | 6.28 | -0.176 | 0.508 | 1.29 | -- | -0.693 | -0.107 | 3.22 | 93.99 | 99 | -- | -- |
| 93.92 | 0.451 | 6.28 | -0.18 | 0.501 | 1.21 | -- | -- | -0.106 | 3.24 | 93.85 | 116 | -- | -- |
| 104.23 | 0.476 | 6.27 | -0.189 | -- | 1.47 | -- | -0.186 | -0.0484 | -- | 93.33 | 110 | -- | -- |
| 107.86 | 0.487 | 6.3 | -0.103 | 0.776 | -- | 0.496 | -- | -0.206 | 3.72 | -- | -- | -- | -- |
| 108.57 | 0.488 | 6.3 | -0.11 | 0.782 | -- | -- | -- | -0.209 | 3.84 | -- | -- | -- | -- |
| 104.22 | 0.475 | 6.27 | -0.199 | -- | 1.45 | -- | -- | -0.0433 | -- | 93.29 | 116 | -- | -- |
| 94.72 | 0.453 | 6.27 | -- | 0.504 | 1.2 | -- | -- | -0.0893 | 3.25 | 93.89 | 116 | -- | -- |
| 142.17 | 0.557 | 6.3 | -0.0781 | -- | -- | -- | -- | -0.188 | -- | -- | -- | -- | -- |
| 108.89 | 0.488 | 6.29 | -- | 0.779 | -- | -- | -- | -0.197 | 3.84 | -- | -- | -- | -- |
| 105.27 | 0.478 | 6.26 | -- | -- | 1.45 | -- | -- | -0.023 | -- | 93.35 | 116 | -- | -- |
| 142.33 | 0.557 | 6.3 | -- | -- | -- | -- | -- | -0.18 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 87.84 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 6 | 8 |
| 2 | 88.06 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 6 | 8 |
| 7 | 88.32 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 3 | 3 |
| 12 | 88.62 | temperature | 25.0 | 90 | < th | dose independent | rect. | 3 | 3 |
| 13 | 88.71 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 3 | 3 |
| 14 | 88.73 | humidity | 90.0 | 90 | > th | dose independent | rect. | 3 | 3 |
| 17 | 88.86 | radiation | 10.0 | 90 | < th | dose independent | rect. | 3 | 3 |
| 18 | 88.97 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 3 | 3 |
| 22 | 89.00 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 6 | 8 |
| 23 | 89.01 | wind | 9.0 | 90 | < th | dose independent | rect. | 3 | 3 |
| 24 | 89.01 | temperature | 10.0 | 90 | > th | dose independent | rect. | 3 | 3 |
| 27 | 89.01 | humidity | 50.0 | 90 | > th | dose independent | rect. | 3 | 3 |
| 30 | 89.01 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 3 | 3 |
| 31 | 89.01 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 3 | 3 |
| 36 | 89.01 | temperature | 10.0 | 90 | > th | dose independent | rect. | 6 | 21 |
| 40 | 89.17 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 42 | 89.28 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 3 |
| 43 | 89.28 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 3 |
| 51 | 89.50 | humidity | 50.0 | 90 | > th | dose independent | rect. | 6 | 21 |
| 54 | 89.65 | wind | 9.0 | 90 | < th | dose dependent | rect. | 3 | 3 |
| 55 | 89.72 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 6 | 21 |
| 56 | 89.72 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 6 | 21 |
| 57 | 89.73 | wind | 9.0 | 90 | < th | dose independent | rect. | 6 | 21 |
| 76 | 90.30 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 3 | 16 |
| 81 | 90.41 | humidity | 90.0 | 90 | > th | dose independent | rect. | 1 | 5 |
| 84 | 90.45 | wind | 7.0 | 90 | < th | dose independent | rect. | 14 | 16 |
| 91 | 90.59 | wind | 1.0 | 90 | > th | dose independent | rect. | 6 | 21 |
| 97 | 90.69 | temperature | 15.0 | 90 | > th | dose independent | rect. | 14 | 16 |
| 110 | 90.80 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 3 | 3 |
| 115 | 90.85 | temperature | 15.0 | 10 | > th | dose independent | rect. | 14 | 16 |
| 122 | 90.98 | temperature | 25.0 | 270 | < th | dose independent | rect. | 24 | 9 |
| 123 | 90.98 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 6 | 21 |
| 124 | 90.98 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 3 | 3 |
| 142 | 91.09 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 1 | 5 |
| 151 | 91.17 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 6 | 21 |
| 153 | 91.17 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 6 | 21 |
| 162 | 91.24 | humidity | 50.0 | 10 | > th | dose independent | rect. | 6 | 21 |
| 166 | 91.27 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 3 | 16 |
| 167 | 91.27 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 14 | 16 |
| 186 | 91.33 | wind | 9.0 | 90 | < th | dose independent | rect. | 3 | 16 |
| 200 | 91.49 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 14 | 16 |
| 204 | 91.55 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 6 | 21 |
| 206 | 91.57 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 1 | 4 |
| 208 | 91.59 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 16 |
| 209 | 91.59 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 210 | 91.61 | temperature | 10.0 | 90 | > th | dose independent | rect. | 19 | 8 |
| 211 | 91.61 | temperature | 30.0 | 90 | < th | dose independent | rect. | 19 | 8 |
| 212 | 91.61 | humidity | 50.0 | 90 | > th | dose independent | rect. | 19 | 8 |
| 214 | 91.61 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 19 | 8 |
| 215 | 91.61 | radiation | 1.0 | 90 | < th | dose independent | rect. | 19 | 8 |
| 220 | 91.61 | temperature | 10.0 | 90 | > th | dose independent | rect. | 3 | 16 |
| 221 | 91.61 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 3 | 16 |
| 223 | 91.61 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 19 | 8 |
| 229 | 91.63 | temperature | 25.0 | 90 | < th | dose independent | rect. | 4 | 1 |
| 233 | 91.64 | wind | 9.0 | 90 | < th | dose independent | rect. | 19 | 8 |
| 250 | 91.78 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 19 | 8 |
| 251 | 91.78 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 19 | 8 |
| 262 | 91.86 | radiation | 30.0 | 90 | < th | dose independent | rect. | 15 | 15 |
| 263 | 91.87 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 6 | 21 |
| 267 | 91.90 | humidity | 50.0 | 10 | > th | dose independent | rect. | 6 | 8 |
| 274 | 91.93 | radiation | 40.0 | 10 | < th | dose independent | rect. | 14 | 16 |
| 279 | 91.97 | radiation | 1.0 | 10 | > th | dose independent | rect. | 6 | 8 |
| 282 | 91.99 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 284 | 92.01 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 288 | 92.02 | humidity | 50.0 | 270 | > th | dose independent | rect. | 5 | 8 |
| 294 | 92.03 | humidity | 90.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 295 | 92.03 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 298 | 92.03 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 301 | 92.03 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 302 | 92.03 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 309 | 92.04 | temperature | 25.0 | 90 | < th | dose independent | rect. | 3 | 8 |
| 311 | 92.05 | wind | 9.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 313 | 92.06 | temperature | 10.0 | 90 | > th | dose independent | rect. | 6 | 8 |
| 314 | 92.06 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 6 | 8 |
| 315 | 92.06 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 6 | 8 |
| 319 | 92.09 | wind | 9.0 | 90 | < th | dose independent | rect. | 6 | 8 |
| 322 | 92.10 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 6 | 8 |
| 324 | 92.10 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 6 | 8 |
| 325 | 92.11 | wind | 9.0 | 10 | < th | dose independent | rect. | 6 | 8 |
| 326 | 92.11 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 6 | 8 |
| 328 | 92.11 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 6 | 8 |
| 331 | 92.12 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 15 | 10 |
| 340 | 92.16 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 14 | 13 |
| 341 | 92.17 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 4 |
| 342 | 92.17 | temperature | 10.0 | 10 | > th | dose independent | rect. | 6 | 8 |
| 344 | 92.17 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 6 | 8 |
| 345 | 92.17 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 6 | 8 |
| 347 | 92.17 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 349 | 92.19 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 14 | 16 |
| 351 | 92.21 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 14 | 16 |
| 355 | 92.24 | radiation | 40.0 | 90 | < th | dose independent | rect. | 13 | 17 |
| 360 | 92.26 | wind | 9.0 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 361 | 92.26 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 364 | 92.26 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 368 | 92.26 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 373 | 92.26 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 374 | 92.26 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 375 | 92.26 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 380 | 92.26 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 7 | 21 |
| 389 | 92.31 | wind | 1.0 | 30 | > th | dose independent | rect. | 6 | 8 |
| 394 | 92.34 | wind | 1.0 | 270 | > th | dose independent | rect. | 4 | 21 |
| 407 | 92.39 | temperature | 25.0 | 90 | < th | dose independent | rect. | 3 | 6 |
| 414 | 92.39 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 17 | 10 |
| 444 | 92.44 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 19 | 8 |
| 446 | 92.45 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 6 | 5 |
| 449 | 92.46 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 14 | 16 |
| 474 | 92.51 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 10 | 17 |
| 479 | 92.52 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 3 | 8 |
| 485 | 92.53 | radiation | 10.0 | 270 | < th | dose independent | rect. | 16 | 9 |
| 489 | 92.54 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 14 | 16 |
| 493 | 92.54 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 14 | 16 |
| 518 | 92.62 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 7 | 8 |
| 521 | 92.62 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 15 | 16 |
| 549 | 92.75 | humidity | 60.0 | 90 | > th | dose independent | rect. | 17 | 10 |
| 556 | 92.78 | temperature | 15.0 | 270 | > th | dose independent | rect. | 24 | 6 |
| 561 | 92.79 | humidity | 50.0 | 270 | > th | dose independent | rect. | 24 | 6 |
| 564 | 92.79 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 24 | 6 |
| 565 | 92.79 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 24 | 6 |
| 566 | 92.79 | radiation | 20.0 | 270 | < th | dose independent | rect. | 24 | 6 |
| 569 | 92.79 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 18 |
| 570 | 92.79 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 24 | 6 |
| 573 | 92.80 | wind | 9.0 | 270 | < th | dose independent | rect. | 24 | 6 |
| 579 | 92.83 | wind | 1.0 | 270 | > th | dose independent | rect. | 17 | 8 |
| 584 | 92.84 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 1 | 4 |
| 606 | 92.87 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 3 | 10 |
| 616 | 92.88 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 24 | 6 |
| 619 | 92.88 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 24 | 6 |
| 652 | 92.97 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 14 | 16 |
| 662 | 92.99 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 6 | 21 |
| 667 | 93.01 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 18 |
| 670 | 93.01 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 18 |
| 691 | 93.06 | wind | 9.0 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 709 | 93.08 | wind | 1.0 | 270 | > th | dose independent | rect. | 1 | 3 |
| 720 | 93.11 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 18 |
| 721 | 93.11 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 4 | 2 |
| 764 | 93.16 | wind | 1.0 | 90 | > th | dose independent | rect. | 19 | 8 |
| 770 | 93.17 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 16 |
| 791 | 93.23 | wind | 9.0 | 30 | < th | dose dependent | rect. | 3 | 16 |
| 852 | 93.32 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 1 | 9 |
| 857 | 93.34 | humidity | 90.0 | 90 | > th | dose independent | rect. | 3 | 7 |
| 863 | 93.35 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 1 | 17 |
| 866 | 93.36 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 19 | 8 |
| 881 | 93.37 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 8 |
| 886 | 93.37 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 8 |
| 925 | 93.44 | wind | 9.0 | 270 | < th | dose dependent | rect. | 24 | 6 |
| 929 | 93.45 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 15 | 15 |
| 934 | 93.47 | temperature | 10.0 | 270 | > th | dose independent | rect. | 17 | 8 |
| 940 | 93.47 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 16 |
| 941 | 93.47 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 16 |
| 957 | 93.52 | wind | 9.0 | 270 | < th | dose independent | rect. | 1 | 16 |
| 964 | 93.53 | radiation | 1.0 | 90 | < th | dose independent | rect. | 6 | 21 |
| 967 | 93.53 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 1 | 17 |
| 969 | 93.54 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 16 |
| 973 | 93.54 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 16 |