Os08g0269500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os08g0269500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 141.54 | 0.559 | 11.9 | -1.41 | 1.55 | -2.07 | 1.72 | 1.15 | -0.754 | 7.9 | 2.232 | 1540 | -- | -- |
| 142.52 | 0.556 | 11.8 | -1.29 | 1.55 | -2.23 | 1.59 | -- | -0.737 | 7.78 | 2.16 | 1543 | -- | -- |
| 149.67 | 0.57 | 11.8 | -1.29 | 1.53 | -2.1 | -- | 0.544 | -0.751 | 7.92 | 2.314 | 1540 | -- | -- |
| 149.72 | 0.57 | 11.8 | -1.24 | 1.55 | -2.18 | -- | -- | -0.749 | 7.87 | 2.222 | 1540 | -- | -- |
| 257.45 | 0.751 | 11.8 | -0.878 | -- | -1.03 | -- | -0.0438 | -0.458 | -- | 2.314 | 1540 | -- | -- |
| 186.58 | 0.64 | 11.8 | -0.901 | 1.78 | -- | 1.14 | -- | -0.447 | 8.81 | -- | -- | -- | -- |
| 190.87 | 0.647 | 11.8 | -0.861 | 1.78 | -- | -- | -- | -0.446 | 8.88 | -- | -- | -- | -- |
| 257.46 | 0.751 | 11.8 | -0.878 | -- | -1.03 | -- | -- | -0.458 | -- | 2.314 | 1540 | -- | -- |
| 184.48 | 0.633 | 11.8 | -- | 1.58 | -1.4 | -- | -- | -0.57 | 8.5 | 5.716 | 1524 | -- | -- |
| 371.16 | 0.9 | 11.8 | -0.861 | -- | -- | -- | -- | -0.433 | -- | -- | -- | -- | -- |
| 210.43 | 0.679 | 11.7 | -- | 1.78 | -- | -- | -- | -0.35 | 8.92 | -- | -- | -- | -- |
| 275.68 | 0.776 | 11.8 | -- | -- | -1.06 | -- | -- | -0.376 | -- | 5.716 | 1524 | -- | -- |
| 390.73 | 0.923 | 11.8 | -- | -- | -- | -- | -- | -0.338 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 137.16 | radiation | 10 | 1440 | > th | dose independent | rect. | 11 | 7 |
| 14 | 137.16 | radiation | 10 | 1440 | < th | dose dependent | rect. | 13 | 5 |
| 15 | 137.60 | radiation | 10 | 1440 | < th | dose dependent | rect. | 13 | 7 |
| 18 | 137.62 | radiation | 10 | 1440 | < th | dose dependent | rect. | 10 | 8 |
| 20 | 137.65 | radiation | 10 | 1440 | < th | dose dependent | rect. | 13 | 15 |
| 22 | 137.67 | radiation | 10 | 1440 | < th | dose dependent | rect. | 13 | 11 |
| 28 | 137.89 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 3 |
| 30 | 137.91 | radiation | 10 | 1440 | < th | dose dependent | rect. | 10 | 10 |
| 34 | 137.95 | radiation | 10 | 1440 | < th | dose dependent | rect. | 10 | 18 |
| 35 | 137.97 | radiation | 10 | 1440 | < th | dose dependent | rect. | 10 | 14 |
| 38 | 138.00 | radiation | 10 | 1440 | < th | dose dependent | rect. | 10 | 16 |
| 77 | 138.40 | radiation | 10 | 1440 | < th | dose dependent | sin | 17 | NA |
| 78 | 138.44 | radiation | 10 | 1440 | > th | dose independent | sin | 17 | NA |
| 112 | 139.44 | humidity | 50 | 720 | > th | dose dependent | rect. | 15 | 4 |
| 139 | 139.89 | humidity | 50 | 720 | > th | dose dependent | rect. | 15 | 6 |
| 196 | 140.67 | radiation | 1 | 1440 | < th | dose independent | rect. | 8 | 12 |
| 203 | 140.72 | radiation | 1 | 1440 | < th | dose independent | rect. | 8 | 16 |
| 204 | 140.72 | radiation | 1 | 1440 | < th | dose independent | rect. | 8 | 20 |
| 212 | 140.77 | radiation | 1 | 1440 | < th | dose independent | rect. | 8 | 18 |
| 232 | 140.87 | humidity | 50 | 720 | > th | dose dependent | rect. | 14 | 13 |
| 277 | 141.18 | radiation | 1 | 1440 | < th | dose independent | sin | 18 | NA |
| 313 | 141.35 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 4 |
| 372 | 141.64 | humidity | 50 | 720 | > th | dose dependent | rect. | 11 | 16 |
| 395 | 141.80 | humidity | 50 | 720 | > th | dose dependent | sin | 17 | NA |
| 442 | 142.10 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 4 |
| 466 | 142.26 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 9 |
| 529 | 142.80 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 9 |
| 546 | 142.93 | humidity | 70 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 616 | 143.25 | temperature | 10 | 1440 | > th | dose dependent | rect. | 13 | 3 |
| 625 | 143.32 | humidity | 70 | 1440 | > th | dose dependent | rect. | 11 | 8 |
| 695 | 143.68 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 13 |
| 782 | 144.14 | radiation | 1 | 720 | < th | dose dependent | rect. | 5 | 22 |
| 791 | 144.21 | temperature | 25 | 1440 | > th | dose dependent | sin | 18 | NA |
| 833 | 144.49 | humidity | 50 | 720 | > th | dose dependent | rect. | 11 | 10 |
| 840 | 144.55 | temperature | 15 | 270 | > th | dose dependent | rect. | 4 | 18 |
| 869 | 144.72 | humidity | 80 | 1440 | < th | dose independent | sin | 23 | NA |
| 880 | 144.78 | temperature | 15 | 270 | > th | dose dependent | rect. | 3 | 20 |
| 925 | 144.97 | humidity | 80 | 1440 | > th | dose independent | sin | 22 | NA |
| 955 | 145.12 | temperature | 20 | 10 | > th | dose dependent | rect. | 4 | 22 |