Os08g0269000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF593 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os08g0269000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF593 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 238.84 | 0.726 | 4.71 | -0.893 | 0.315 | -1.07 | -1.51 | -0.693 | -0.0888 | 6.97 | 1011 | 4396 | -- | -- |
| 240.47 | 0.722 | 4.72 | -0.985 | 0.317 | -1.06 | -1.37 | -- | -0.0876 | 6.72 | 1011 | 4297 | -- | -- |
| 243.9 | 0.727 | 4.71 | -0.957 | 0.342 | -1.14 | -- | -0.675 | -0.0942 | 5.7 | 1011 | 4676 | -- | -- |
| 244.99 | 0.729 | 4.72 | -1.09 | 0.336 | -1.1 | -- | -- | -0.123 | 5.72 | 1011 | 4530 | -- | -- |
| 249.76 | 0.736 | 4.72 | -0.951 | -- | -1.1 | -- | -0.545 | -0.0903 | -- | 1011 | 4316 | -- | -- |
| 272.24 | 0.774 | 4.68 | -0.788 | 0.361 | -- | -1.5 | -- | 0.0754 | 6.75 | -- | -- | -- | -- |
| 277.29 | 0.78 | 4.68 | -0.817 | 0.374 | -- | -- | -- | 0.0776 | 5.69 | -- | -- | -- | -- |
| 250.63 | 0.737 | 4.73 | -1.07 | -- | -1.12 | -- | -- | -0.118 | -- | 1011 | 4279 | -- | -- |
| 271.91 | 0.768 | 4.71 | -- | 0.308 | -1.08 | -- | -- | -0.00932 | 5.41 | 1013 | 4175 | -- | -- |
| 284.57 | 0.788 | 4.68 | -0.805 | -- | -- | -- | -- | 0.0865 | -- | -- | -- | -- | -- |
| 294.87 | 0.803 | 4.66 | -- | 0.362 | -- | -- | -- | 0.169 | 5.79 | -- | -- | -- | -- |
| 276.59 | 0.775 | 4.69 | -- | -- | -1.14 | -- | -- | 0.0585 | -- | 1013 | 4178 | -- | -- |
| 301.65 | 0.811 | 4.66 | -- | -- | -- | -- | -- | 0.176 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 231.80 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 4 | 233.33 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 17 | 19 |
| 5 | 233.36 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 5 | 7 |
| 11 | 233.37 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 22 | 14 |
| 12 | 233.37 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 19 | 17 |
| 21 | 233.75 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 17 | 21 |
| 49 | 233.84 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 10 | 20 |
| 54 | 233.86 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 10 | 9 |
| 79 | 233.91 | radiation | 20.0 | 14400 | < th | dose independent | sin | 6 | NA |
| 82 | 233.94 | radiation | 40.0 | 14400 | > th | dose dependent | rect. | 7 | 2 |
| 114 | 233.99 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 10 | 6 |
| 180 | 234.30 | radiation | 10.0 | 14400 | < th | dose independent | sin | 22 | NA |
| 306 | 234.59 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 4 | 16 |
| 325 | 234.60 | radiation | 10.0 | 14400 | < th | dose independent | no | NA | NA |
| 326 | 234.60 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 5 | 14 |
| 572 | 235.09 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 7 | 2 |
| 591 | 235.26 | radiation | 10.0 | 14400 | > th | dose dependent | rect. | 5 | 6 |
| 650 | 235.39 | atmosphere | 1015.0 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 669 | 235.43 | radiation | 10.0 | 14400 | > th | dose dependent | sin | 9 | NA |
| 703 | 235.49 | atmosphere | 1015.0 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 819 | 235.75 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 2 |
| 823 | 235.80 | radiation | 20.0 | 14400 | < th | dose dependent | rect. | 11 | 1 |
| 827 | 235.82 | radiation | 40.0 | 14400 | > th | dose dependent | sin | 11 | NA |
| 890 | 236.02 | atmosphere | 1015.0 | 14400 | > th | dose dependent | rect. | 3 | 7 |
| 901 | 236.03 | atmosphere | 1015.0 | 14400 | > th | dose dependent | rect. | 5 | 4 |
| 911 | 236.04 | radiation | 30.0 | 14400 | < th | dose dependent | rect. | 4 | 8 |
| 917 | 236.04 | radiation | 40.0 | 14400 | < th | dose dependent | rect. | 22 | 14 |
| 918 | 236.04 | radiation | 40.0 | 14400 | < th | dose dependent | rect. | 19 | 17 |
| 953 | 236.06 | radiation | 30.0 | 14400 | < th | dose dependent | sin | 8 | NA |
| 968 | 236.11 | atmosphere | 1015.0 | 14400 | > th | dose dependent | rect. | 2 | 2 |