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Os08g0263300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.62 (0.0121) R2 : 0.411
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.52 (0.0292) R2dC : 0.41 R2C : 0.41
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0214 (0.0254) R2dN8 : 0.00118 R2N8 : 0.00154
σ : 0.228
deviance : 23.72
__
_____
C
peak time of C : 1.67
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
20.09 0.211 9.6 -0.0355 0.137 0.46 0.392 0.129 0.048 5.76 20 89 -- --
20.12 0.209 9.6 -0.0336 0.148 0.436 0.408 -- 0.0474 4.93 20 87 -- --
20.43 0.21 9.61 -0.0342 0.152 0.428 -- 0.158 0.0436 4.64 20.03 89 -- --
20.55 0.211 9.6 -0.0363 0.154 0.429 -- -- 0.0448 4.67 20 88 -- --
20.84 0.213 9.61 -0.019 -- 0.509 -- 0.24 0.0467 -- 21.44 147 -- --
23.4 0.227 9.62 -0.0484 0.522 -- 0.244 -- 0.0164 1.72 -- -- -- --
23.64 0.228 9.62 -0.0561 0.521 -- -- -- 0.0151 1.67 -- -- -- --
21.08 0.214 9.61 -0.0223 -- 0.498 -- -- 0.0455 -- 20.11 134 -- --
20.59 0.211 9.6 -- 0.153 0.43 -- -- 0.0487 4.71 20 88 -- --
40.2 0.296 9.61 -0.035 -- -- -- -- 0.0267 -- -- -- -- --
23.72 0.228 9.62 -- 0.52 -- -- -- 0.0214 1.67 -- -- -- --
21.1 0.214 9.61 -- -- 0.504 -- -- 0.0486 -- 20.55 134 -- --
40.23 0.296 9.61 -- -- -- -- -- 0.0306 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 19.66 radiation 20 90 < th dose dependent rect. 11 22
4 19.74 radiation 10 90 < th dose dependent rect. 5 14
6 19.82 radiation 40 270 < th dose dependent rect. 10 22
8 19.90 radiation 10 90 < th dose independent rect. 11 21
19 20.00 humidity 60 30 > th dose dependent rect. 5 15
22 20.02 radiation 10 90 < th dose independent rect. 4 15
30 20.06 radiation 20 90 < th dose dependent rect. 4 23
36 20.09 radiation 20 90 < th dose dependent no NA NA
41 20.11 radiation 20 90 < th dose dependent rect. 17 23
42 20.12 radiation 10 90 < th dose independent rect. 4 23
50 20.15 temperature 10 30 > th dose dependent rect. 9 20
55 20.17 radiation 10 90 > th dose independent rect. 8 23
57 20.18 radiation 40 270 < th dose dependent rect. 2 13
59 20.19 radiation 10 90 < th dose independent rect. 4 19
68 20.20 radiation 20 90 < th dose dependent rect. 15 23
71 20.21 radiation 20 90 < th dose dependent rect. 21 23
73 20.22 radiation 20 90 < th dose dependent sin 23 NA
74 20.22 radiation 40 90 < th dose dependent rect. 4 11
81 20.23 radiation 40 30 < th dose dependent rect. 5 9
88 20.24 radiation 10 90 < th dose independent sin 23 NA
91 20.25 radiation 20 30 < th dose dependent rect. 5 11
114 20.28 radiation 10 90 < th dose independent rect. 17 23
116 20.28 radiation 20 90 < th dose dependent rect. 4 19
150 20.33 radiation 10 90 < th dose independent no NA NA
178 20.36 radiation 10 90 < th dose independent rect. 21 23
186 20.37 temperature 30 30 < th dose dependent rect. 5 15
216 20.40 radiation 30 90 < th dose dependent rect. 17 16
219 20.41 radiation 10 90 > th dose independent sin 23 NA
225 20.41 radiation 10 90 < th dose independent rect. 13 23
233 20.42 radiation 10 30 < th dose independent rect. 5 11
252 20.44 radiation 10 90 < th dose independent rect. 15 23
278 20.47 radiation 10 90 < th dose independent rect. 4 21
289 20.48 radiation 40 30 < th dose dependent rect. 5 7
356 20.54 radiation 10 90 > th dose independent no NA NA
358 20.54 radiation 10 90 > th dose independent rect. 6 11
444 20.54 radiation 10 270 > th dose independent rect. 16 23
468 20.56 radiation 10 90 < th dose independent rect. 1 23
478 20.56 radiation 20 90 < th dose dependent rect. 1 23
482 20.57 humidity 70 30 > th dose independent rect. 5 15
495 20.58 radiation 10 1440 < th dose independent rect. 21 8
496 20.58 radiation 10 90 > th dose independent rect. 8 10
555 20.61 humidity 60 30 > th dose dependent rect. 5 18
572 20.62 radiation 20 90 < th dose dependent rect. 4 21
582 20.63 radiation 10 1440 < th dose dependent rect. 21 8
591 20.64 radiation 40 10 < th dose independent rect. 5 15
603 20.65 atmosphere 1010 10 < th dose independent rect. 5 3
604 20.65 wind 9 1440 < th dose independent rect. 5 5
605 20.65 humidity 60 14400 > th dose independent rect. 21 8
608 20.65 humidity 60 30 > th dose dependent rect. 5 11
644 20.67 radiation 10 270 < th dose independent rect. 1 20
650 20.67 radiation 20 30 < th dose dependent rect. 5 4
660 20.68 radiation 10 90 < th dose independent rect. 7 23
672 20.68 radiation 40 270 < th dose dependent rect. 1 22
791 20.73 humidity 50 10 > th dose dependent rect. 17 16
811 20.74 radiation 20 270 < th dose dependent rect. 1 20
819 20.75 radiation 20 90 < th dose independent rect. 17 16
882 20.77 radiation 20 90 < th dose dependent rect. 7 23
923 20.79 radiation 30 90 < th dose dependent rect. 17 18
958 20.81 radiation 10 30 < th dose independent rect. 5 4
960 20.81 radiation 10 90 < th dose independent rect. 7 12
966 20.81 humidity 60 30 > th dose dependent rect. 5 9
983 20.82 radiation 40 10 < th dose independent rect. 5 18
992 20.82 temperature 30 30 < th dose dependent rect. 5 11