Os08g0256700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os08g0256700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 333.4 | 0.858 | 3.22 | 0.943 | 0.464 | -2.92 | 0.947 | 0.593 | 1.05 | 5.43 | 0.2498 | 569 | -- | -- |
| 333.28 | 0.85 | 3.22 | 0.949 | 0.469 | -2.83 | 0.944 | -- | 1.05 | 5.5 | 0.6574 | 568 | -- | -- |
| 335.07 | 0.853 | 3.22 | 0.973 | 0.468 | -2.83 | -- | -0.028 | 1.05 | 6.03 | 0.6329 | 588 | -- | -- |
| 335.04 | 0.853 | 3.22 | 0.949 | 0.479 | -2.82 | -- | -- | 1.05 | 6.1 | 0.6058 | 588 | -- | -- |
| 346.83 | 0.867 | 3.22 | 0.962 | -- | -2.73 | -- | -0.152 | 1.06 | -- | 0.4701 | 588 | -- | -- |
| 378.59 | 0.912 | 3.23 | 1.28 | 0.436 | -- | 1.56 | -- | 0.977 | 4.06 | -- | -- | -- | -- |
| 384.01 | 0.918 | 3.24 | 1.26 | 0.487 | -- | -- | -- | 0.968 | 5.34 | -- | -- | -- | -- |
| 346.84 | 0.867 | 3.22 | 0.96 | -- | -2.77 | -- | -- | 1.06 | -- | 0.4803 | 588 | -- | -- |
| 357.7 | 0.881 | 3.24 | -- | 0.522 | -3.09 | -- | -- | 0.968 | 6.09 | 8.536e-07 | 588 | -- | -- |
| 396.36 | 0.93 | 3.24 | 1.28 | -- | -- | -- | -- | 0.98 | -- | -- | -- | -- | -- |
| 426.18 | 0.966 | 3.27 | -- | 0.508 | -- | -- | -- | 0.827 | 5.25 | -- | -- | -- | -- |
| 369.81 | 0.896 | 3.24 | -- | -- | -3.15 | -- | -- | 0.975 | -- | 0.1987 | 621 | -- | -- |
| 439.68 | 0.979 | 3.27 | -- | -- | -- | -- | -- | 0.838 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 324.43 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 2 | 324.46 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 4 | 325.88 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 4 | 3 |
| 10 | 326.39 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 23 | 9 |
| 12 | 326.41 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 4 | 3 |
| 14 | 326.62 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 23 | 9 |
| 24 | 327.05 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 31 | 327.31 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 77 | 328.33 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 17 | 3 |
| 79 | 328.39 | humidity | 70.0 | 14400 | < th | dose independent | sin | 12 | NA |
| 92 | 328.49 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 17 | 12 |
| 106 | 328.64 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 15 | 21 |
| 112 | 328.77 | humidity | 60.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 113 | 328.79 | humidity | 70.0 | 14400 | > th | dose independent | sin | 11 | NA |
| 116 | 328.81 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 15 | 21 |
| 128 | 328.93 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 15 | 5 |
| 130 | 328.94 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 15 | 17 |
| 147 | 329.04 | wind | 3.0 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 153 | 329.10 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 8 | 12 |
| 236 | 329.24 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 9 | 11 |
| 249 | 329.26 | humidity | 70.0 | 14400 | < th | dose independent | no | NA | NA |
| 307 | 329.36 | wind | 3.0 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 344 | 329.43 | humidity | 70.0 | 14400 | < th | dose independent | sin | 20 | NA |
| 352 | 329.45 | wind | 3.0 | 43200 | < th | dose independent | rect. | 4 | 4 |
| 418 | 329.56 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 430 | 329.59 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 9 | 5 |
| 463 | 329.61 | humidity | 70.0 | 14400 | > th | dose independent | no | NA | NA |
| 483 | 329.65 | wind | 3.0 | 43200 | < th | dose independent | rect. | 24 | 8 |
| 494 | 329.68 | wind | 3.0 | 43200 | > th | dose independent | rect. | 4 | 4 |
| 499 | 329.69 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 500 | 329.69 | wind | 3.0 | 43200 | > th | dose independent | rect. | 24 | 8 |
| 506 | 329.69 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 2 |
| 522 | 329.80 | humidity | 70.0 | 14400 | > th | dose independent | sin | 21 | NA |
| 582 | 329.97 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 23 |
| 584 | 329.98 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 586 | 329.99 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 9 | 5 |
| 622 | 330.14 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 13 | 8 |
| 646 | 330.27 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 648 | 330.27 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 778 | 330.65 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 782 | 330.67 | humidity | 80.0 | 14400 | < th | dose dependent | sin | 17 | NA |
| 934 | 331.08 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 2 |