Os08g0249500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Diacylglycerol kinase accessory region domain containing protein.
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Os08g0249500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Diacylglycerol kinase accessory region domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 85.62 | 0.435 | 5.97 | -0.0642 | 1.14 | -1.06 | -0.811 | -1.83 | 0.272 | 19.4 | 1.302 | 4298 | -- | -- |
| 89.62 | 0.441 | 5.97 | 0.249 | 1.15 | -0.874 | -0.865 | -- | 0.285 | 19.4 | 1.569 | 4292 | -- | -- |
| 87.26 | 0.435 | 5.97 | -0.031 | 1.16 | -1.04 | -- | -1.8 | 0.271 | 19.5 | 1.483 | 4272 | -- | -- |
| 91.42 | 0.445 | 5.96 | 0.277 | 1.22 | -0.916 | -- | -- | 0.305 | 19.6 | 1.649 | 4252 | -- | -- |
| 152.85 | 0.576 | 5.96 | 0.00535 | -- | -1.04 | -- | -1.69 | 0.226 | -- | 1.46 | 4354 | -- | -- |
| 108.87 | 0.489 | 5.98 | 0.136 | 1.14 | -- | -0.841 | -- | 0.137 | 19.2 | -- | -- | -- | -- |
| 110.76 | 0.493 | 5.98 | 0.154 | 1.13 | -- | -- | -- | 0.135 | 19.2 | -- | -- | -- | -- |
| 156.17 | 0.582 | 5.9 | 0.403 | -- | -1.06 | -- | -- | 0.377 | -- | 1.502 | 4384 | -- | -- |
| 93.8 | 0.451 | 5.96 | -- | 1.19 | -0.908 | -- | -- | 0.305 | 19.6 | 1.65 | 4252 | -- | -- |
| 178.82 | 0.625 | 5.96 | 0.133 | -- | -- | -- | -- | 0.116 | -- | -- | -- | -- | -- |
| 111.38 | 0.494 | 5.99 | -- | 1.13 | -- | -- | -- | 0.118 | 19.2 | -- | -- | -- | -- |
| 158.58 | 0.587 | 5.9 | -- | -- | -0.977 | -- | -- | 0.338 | -- | 1.76 | 4384 | -- | -- |
| 179.28 | 0.625 | 5.96 | -- | -- | -- | -- | -- | 0.101 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 80.24 | humidity | 90 | 43200 | > th | dose dependent | rect. | 9 | 2 |
| 3 | 80.40 | humidity | 80 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 4 | 80.41 | humidity | 90 | 43200 | > th | dose independent | rect. | 9 | 2 |
| 9 | 80.72 | humidity | 70 | 14400 | > th | dose independent | rect. | 19 | 13 |
| 12 | 80.81 | humidity | 90 | 43200 | < th | dose independent | rect. | 9 | 4 |
| 13 | 80.82 | humidity | 70 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 14 | 80.89 | humidity | 70 | 14400 | < th | dose independent | rect. | 18 | 13 |
| 15 | 80.96 | humidity | 70 | 14400 | < th | dose independent | rect. | 18 | 2 |
| 29 | 81.01 | humidity | 90 | 43200 | < th | dose independent | rect. | 9 | 2 |
| 32 | 81.03 | humidity | 70 | 14400 | > th | dose independent | rect. | 18 | 5 |
| 33 | 81.03 | humidity | 70 | 14400 | > th | dose independent | rect. | 18 | 7 |
| 50 | 81.15 | temperature | 25 | 14400 | > th | dose independent | sin | 12 | NA |
| 58 | 81.20 | temperature | 25 | 14400 | > th | dose independent | rect. | 17 | 15 |
| 59 | 81.21 | temperature | 25 | 14400 | > th | dose independent | rect. | 19 | 14 |
| 61 | 81.22 | temperature | 25 | 14400 | > th | dose independent | rect. | 19 | 8 |
| 62 | 81.22 | temperature | 25 | 14400 | > th | dose independent | rect. | 15 | 17 |
| 73 | 81.29 | temperature | 25 | 14400 | > th | dose independent | rect. | 17 | 11 |
| 80 | 81.31 | temperature | 25 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 97 | 81.35 | temperature | 25 | 14400 | < th | dose independent | rect. | 15 | 17 |
| 99 | 81.35 | temperature | 25 | 14400 | > th | dose dependent | rect. | 19 | 16 |
| 103 | 81.37 | temperature | 25 | 14400 | < th | dose independent | sin | 12 | NA |
| 113 | 81.40 | temperature | 25 | 14400 | > th | dose independent | rect. | 5 | 3 |
| 128 | 81.42 | temperature | 25 | 14400 | > th | dose dependent | sin | 9 | NA |
| 147 | 81.46 | temperature | 25 | 14400 | < th | dose independent | rect. | 19 | 14 |
| 180 | 81.52 | temperature | 25 | 14400 | < th | dose independent | rect. | 5 | 3 |
| 196 | 81.53 | temperature | 25 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 198 | 81.54 | temperature | 25 | 14400 | < th | dose independent | rect. | 19 | 7 |
| 219 | 81.58 | temperature | 25 | 14400 | < th | dose independent | rect. | 17 | 11 |
| 241 | 81.60 | temperature | 25 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 253 | 81.62 | temperature | 25 | 14400 | > th | dose independent | rect. | 2 | 7 |
| 256 | 81.62 | temperature | 25 | 14400 | > th | dose dependent | rect. | 2 | 9 |
| 261 | 81.63 | temperature | 25 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 277 | 81.64 | temperature | 25 | 14400 | > th | dose dependent | rect. | 18 | 7 |
| 288 | 81.65 | temperature | 25 | 14400 | > th | dose dependent | rect. | 7 | 4 |
| 337 | 81.70 | temperature | 25 | 14400 | > th | dose dependent | rect. | 18 | 4 |
| 371 | 81.73 | temperature | 25 | 14400 | < th | dose independent | rect. | 19 | 20 |
| 428 | 81.79 | temperature | 25 | 14400 | < th | dose independent | rect. | 19 | 4 |
| 574 | 81.92 | temperature | 25 | 14400 | > th | dose dependent | no | NA | NA |
| 591 | 81.93 | temperature | 25 | 14400 | > th | dose dependent | rect. | 5 | 21 |
| 596 | 81.93 | temperature | 25 | 14400 | > th | dose dependent | rect. | 2 | 23 |
| 613 | 81.94 | temperature | 25 | 14400 | > th | dose dependent | rect. | 6 | 19 |
| 624 | 81.95 | humidity | 90 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 728 | 82.02 | temperature | 25 | 14400 | > th | dose independent | no | NA | NA |
| 778 | 82.06 | temperature | 25 | 14400 | > th | dose independent | rect. | 5 | 23 |
| 812 | 82.09 | temperature | 25 | 14400 | < th | dose independent | no | NA | NA |
| 841 | 82.11 | temperature | 25 | 14400 | > th | dose independent | rect. | 1 | 23 |
| 866 | 82.13 | temperature | 25 | 14400 | > th | dose independent | rect. | 22 | 23 |
| 868 | 82.13 | temperature | 25 | 14400 | < th | dose independent | rect. | 5 | 23 |
| 905 | 82.16 | temperature | 25 | 14400 | < th | dose independent | rect. | 3 | 23 |
| 912 | 82.17 | humidity | 90 | 43200 | > th | dose independent | rect. | 8 | 10 |
| 916 | 82.17 | temperature | 25 | 14400 | < th | dose independent | rect. | 24 | 23 |
| 930 | 82.18 | temperature | 25 | 14400 | < th | dose independent | rect. | 22 | 23 |
| 966 | 82.20 | temperature | 30 | 14400 | < th | dose dependent | rect. | 19 | 2 |
| 967 | 82.20 | wind | 3 | 43200 | > th | dose dependent | rect. | 5 | 3 |
| 981 | 82.21 | humidity | 90 | 43200 | > th | dose dependent | rect. | 13 | 9 |