FiT-DB / Search/ Help/ Sample detail

Os08g0242900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.78 (0.0143) R2 : 0.634
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.01 (0.0371) R2dC : 0.599 R2C : 0.591
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.192 (0.03) R2dN8 : 0.0428 R2N8 : 0.0352
σ : 0.269
deviance : 32.99
__
_____
C
peak time of C : 6.98
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
22.79 0.224 9.74 0.643 0.993 -0.67 0.134 -1.64 0.239 7 0.1699 4340 -- --
24.37 0.23 9.76 0.384 1.08 -0.383 0.204 -- 0.196 6.56 2.46 3360 -- --
22.83 0.223 9.74 0.643 0.994 -0.674 -- -1.65 0.24 6.98 0.17 4349 -- --
24.28 0.229 9.78 0.416 1.09 -0.33 -- -- 0.204 6.56 2.329 3374 -- --
69.32 0.39 9.8 0.518 -- -0.296 -- 0.164 0.254 -- 0.146 4379 -- --
25.87 0.238 9.77 0.514 1 -- 0.164 -- 0.25 7.01 -- -- -- --
25.94 0.239 9.77 0.517 1 -- -- -- 0.25 7.01 -- -- -- --
48.62 0.325 9.78 0.271 -- 1.14 -- -- 0.262 -- 4.7 2250 -- --
25.3 0.234 9.79 -- 1.03 -0.379 -- -- 0.22 6.98 0.1333 46770 -- --
78.96 0.415 9.79 0.538 -- -- -- -- 0.268 -- -- -- -- --
32.99 0.269 9.78 -- 1.01 -- -- -- 0.192 6.98 -- -- -- --
54.18 0.343 9.78 -- -- 1.26 -- -- 0.326 -- 6.49 2249 -- --
86.58 0.434 9.8 -- -- -- -- -- 0.209 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 21.78 radiation 1.0 720 > th dose independent rect. 10 5
2 21.78 humidity 50.0 720 > th dose independent rect. 18 21
3 21.92 humidity 50.0 720 > th dose independent rect. 10 5
4 21.93 temperature 15.0 270 > th dose independent rect. 18 12
5 22.01 wind 1.0 720 > th dose independent rect. 18 5
6 22.04 temperature 15.0 720 > th dose independent rect. 18 5
8 22.05 radiation 10.0 720 < th dose independent rect. 3 3
10 22.17 precipitation 0.1 270 < th dose independent rect. 2 13
11 22.17 precipitation 0.1 270 < th dose dependent rect. 2 13
13 22.18 radiation 10.0 720 < th dose independent rect. 18 13
14 22.23 temperature 10.0 720 > th dose dependent rect. 20 1
16 22.28 temperature 10.0 720 > th dose dependent rect. 19 3
17 22.33 humidity 50.0 720 > th dose independent rect. 3 10
21 22.36 humidity 50.0 720 > th dose independent rect. 2 13
22 22.38 radiation 10.0 720 < th dose independent rect. 19 11
24 22.42 wind 9.0 270 < th dose independent rect. 15 11
25 22.44 temperature 10.0 270 > th dose independent rect. 15 11
28 22.44 temperature 10.0 270 > th dose independent rect. 2 13
29 22.44 atmosphere 1015.0 270 < th dose independent rect. 2 13
32 22.47 precipitation 0.1 720 < th dose independent rect. 18 5
33 22.47 precipitation 0.1 720 < th dose dependent rect. 18 5
34 22.47 humidity 90.0 90 > th dose dependent rect. 3 14
36 22.48 temperature 25.0 720 > th dose dependent rect. 20 1
38 22.49 radiation 40.0 270 < th dose independent rect. 15 11
42 22.50 temperature 15.0 270 > th dose independent rect. 10 20
45 22.51 wind 9.0 270 < th dose independent rect. 6 12
48 22.53 atmosphere 995.0 270 > th dose independent rect. 2 13
50 22.54 humidity 90.0 30 > th dose dependent rect. 4 8
61 22.58 radiation 40.0 4320 < th dose dependent rect. 18 3
64 22.59 temperature 15.0 720 > th dose independent rect. 11 11
65 22.59 radiation 20.0 90 < th dose independent rect. 16 11
66 22.59 wind 9.0 720 < th dose independent rect. 6 21
67 22.60 wind 3.0 43200 < th dose dependent rect. 2 1
68 22.60 radiation 40.0 90 < th dose dependent rect. 16 11
71 22.61 wind 9.0 720 < th dose independent rect. 23 19
73 22.61 radiation 10.0 720 < th dose dependent rect. 3 3
76 22.62 radiation 1.0 10 > th dose independent rect. 12 18
81 22.64 precipitation 0.1 720 < th dose independent rect. 9 6
84 22.64 precipitation 0.1 720 < th dose dependent rect. 9 6
85 22.65 precipitation 0.1 270 < th dose independent rect. 18 12
86 22.65 precipitation 0.1 720 < th dose independent rect. 18 21
90 22.65 precipitation 0.1 270 < th dose dependent rect. 18 12
91 22.65 precipitation 0.1 720 < th dose dependent rect. 18 21
108 22.68 humidity 90.0 270 > th dose dependent rect. 1 4
112 22.69 temperature 15.0 270 > th dose independent rect. 6 12
115 22.69 humidity 90.0 90 > th dose dependent rect. 3 4
130 22.71 humidity 50.0 270 > th dose independent rect. 10 20
136 22.72 precipitation 0.1 270 < th dose independent rect. 15 11
137 22.72 atmosphere 995.0 270 > th dose independent rect. 18 12
138 22.72 humidity 90.0 30 > th dose dependent rect. 4 2
140 22.72 precipitation 0.1 270 < th dose dependent rect. 15 11
142 22.73 temperature 15.0 720 > th dose independent rect. 10 5
145 22.74 humidity 90.0 10 > th dose independent rect. 4 2
146 22.74 wind 9.0 720 < th dose independent rect. 6 5
147 22.74 precipitation 0.1 720 < th dose independent rect. 6 5
151 22.74 humidity 50.0 270 > th dose independent rect. 18 12
152 22.74 atmosphere 1015.0 270 < th dose independent rect. 6 12
159 22.74 precipitation 0.1 720 < th dose dependent rect. 6 5
163 22.75 temperature 20.0 270 > th dose independent rect. 6 4
166 22.75 wind 9.0 270 < th dose independent rect. 2 13
168 22.75 humidity 90.0 720 < th dose dependent rect. 20 1
169 22.75 radiation 10.0 43200 < th dose dependent rect. 18 11
172 22.75 radiation 40.0 270 < th dose dependent rect. 18 12
174 22.76 humidity 90.0 270 < th dose independent rect. 24 10
176 22.76 atmosphere 1005.0 14400 > th dose dependent rect. 18 1
185 22.77 humidity 80.0 43200 < th dose independent rect. 13 2
186 22.77 wind 7.0 720 < th dose independent rect. 3 3
188 22.77 temperature 10.0 720 > th dose independent rect. 3 3
189 22.77 temperature 30.0 720 < th dose independent rect. 3 3
190 22.77 humidity 50.0 720 > th dose independent rect. 3 3
193 22.77 atmosphere 995.0 720 > th dose independent rect. 3 3
197 22.77 wind 9.0 720 < th dose independent rect. 21 6
201 22.77 temperature 10.0 720 > th dose independent rect. 6 21
202 22.77 humidity 90.0 90 > th dose dependent sin 2 NA
209 22.78 wind 9.0 720 < th dose independent rect. 15 3
210 22.78 temperature 10.0 720 > th dose independent rect. 21 6
211 22.78 temperature 30.0 720 < th dose independent rect. 21 6
212 22.78 humidity 50.0 720 > th dose independent rect. 21 6
215 22.78 atmosphere 995.0 720 > th dose independent rect. 21 6
216 22.78 radiation 1.0 720 < th dose independent rect. 21 6
222 22.78 wind 9.0 270 < th dose independent rect. 18 12
223 22.78 temperature 10.0 720 > th dose independent rect. 3 18
225 22.78 humidity 70.0 43200 > th dose dependent rect. 13 1
230 22.78 radiation 1.0 720 < th dose dependent rect. 21 6
250 22.80 radiation 10.0 720 < th dose independent rect. 18 5
251 22.80 temperature 15.0 270 > th dose independent rect. 9 22
260 22.80 humidity 90.0 90 > th dose dependent rect. 1 17
261 22.81 wind 9.0 43200 > th dose independent rect. 16 1
262 22.81 humidity 80.0 43200 > th dose independent rect. 13 2
266 22.81 atmosphere 995.0 720 > th dose independent rect. 6 5
267 22.81 atmosphere 1015.0 720 < th dose independent rect. 6 5
268 22.81 humidity 90.0 10 > th dose independent rect. 4 8
270 22.81 wind 9.0 720 < th dose independent rect. 21 14
306 22.82 radiation 40.0 43200 < th dose dependent rect. 18 9
311 22.83 wind 9.0 43200 < th dose independent rect. 16 1
313 22.83 temperature 10.0 720 > th dose independent rect. 15 3
316 22.83 atmosphere 1015.0 720 < th dose independent rect. 15 3
321 22.83 humidity 80.0 43200 > th dose independent rect. 13 5
336 22.83 temperature 10.0 720 > th dose independent rect. 18 21
344 22.83 wind 9.0 270 < th dose dependent rect. 6 4
345 22.83 humidity 80.0 720 < th dose dependent rect. 19 4
359 22.83 radiation 10.0 43200 < th dose dependent rect. 18 9
365 22.84 humidity 50.0 720 > th dose independent rect. 18 5
370 22.84 temperature 10.0 720 > th dose independent rect. 23 19
407 22.85 atmosphere 1015.0 720 < th dose independent rect. 9 6
409 22.85 temperature 10.0 720 > th dose independent rect. 3 10
410 22.85 atmosphere 995.0 720 > th dose independent rect. 3 10
411 22.85 atmosphere 995.0 90 > th dose independent rect. 16 11
412 22.85 temperature 15.0 10 > th dose independent rect. 20 12
413 22.85 temperature 10.0 720 > th dose independent rect. 13 14
414 22.85 temperature 10.0 720 > th dose independent rect. 15 18
416 22.85 precipitation 0.1 270 < th dose independent rect. 10 20
430 22.85 precipitation 0.1 270 < th dose dependent rect. 10 20
432 22.86 precipitation 0.1 720 < th dose independent rect. 3 3
438 22.86 atmosphere 1010.0 270 < th dose independent rect. 10 20
446 22.86 precipitation 0.1 720 < th dose dependent rect. 3 3
459 22.87 radiation 1.0 270 > th dose independent rect. 6 4
460 22.87 wind 9.0 720 < th dose independent rect. 18 5
467 22.87 temperature 15.0 10 > th dose independent rect. 12 20
486 22.87 radiation 1.0 43200 < th dose dependent rect. 18 17
487 22.87 radiation 40.0 14400 > th dose dependent rect. 14 19
491 22.88 humidity 50.0 720 > th dose independent rect. 6 5
498 22.88 temperature 15.0 720 > th dose independent rect. 10 13
499 22.88 temperature 10.0 720 > th dose independent rect. 21 14
500 22.88 atmosphere 995.0 720 > th dose independent rect. 21 14
501 22.88 radiation 30.0 14400 > th dose independent rect. 15 17
519 22.88 radiation 1.0 43200 < th dose dependent rect. 18 14
523 22.89 radiation 30.0 14400 < th dose independent rect. 15 1
529 22.89 atmosphere 1015.0 720 < th dose independent rect. 11 10
559 22.89 temperature 10.0 10 > th dose dependent rect. 12 19
561 22.90 radiation 1.0 43200 < th dose independent rect. 18 1
564 22.90 humidity 80.0 720 < th dose independent rect. 19 3
581 22.90 precipitation 0.1 270 < th dose independent rect. 6 12
583 22.90 radiation 40.0 14400 > th dose dependent rect. 14 1
602 22.90 humidity 90.0 90 > th dose dependent rect. 1 11
610 22.90 radiation 20.0 10 < th dose dependent rect. 16 12
612 22.90 precipitation 0.1 270 < th dose dependent rect. 6 12
621 22.91 radiation 10.0 14400 < th dose independent rect. 15 1
629 22.91 radiation 1.0 14400 > th dose independent rect. 18 11
661 22.92 wind 9.0 720 < th dose independent rect. 23 10
662 22.92 temperature 10.0 720 > th dose independent rect. 23 10
664 22.92 humidity 50.0 720 > th dose independent rect. 23 10
665 22.92 atmosphere 995.0 720 > th dose independent rect. 23 10
667 22.92 temperature 30.0 270 < th dose independent rect. 18 12
672 22.92 atmosphere 1005.0 14400 > th dose dependent sin 16 NA
675 22.92 radiation 1.0 43200 < th dose dependent sin 10 NA
679 22.92 atmosphere 1005.0 14400 > th dose dependent rect. 22 1
719 22.93 atmosphere 1010.0 14400 < th dose independent rect. 6 1
720 22.93 radiation 1.0 14400 > th dose independent rect. 18 1
767 22.93 temperature 10.0 90 > th dose dependent rect. 20 11
787 22.94 atmosphere 1010.0 14400 < th dose independent rect. 10 1
788 22.94 wind 5.0 270 < th dose independent rect. 7 2
799 22.94 radiation 1.0 43200 > th dose dependent rect. 18 1
802 22.94 radiation 1.0 43200 < th dose dependent rect. 4 2
812 22.94 radiation 1.0 43200 < th dose dependent rect. 4 5
840 22.94 radiation 1.0 43200 < th dose dependent rect. 20 10
914 22.95 wind 9.0 270 < th dose dependent rect. 7 2
917 22.95 wind 1.0 90 < th dose dependent rect. 4 3
994 22.96 humidity 90.0 43200 > th dose independent rect. 22 1
995 22.96 wind 1.0 90 < th dose independent rect. 4 3
997 22.96 radiation 30.0 14400 < th dose independent rect. 15 5