Os08g0236800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os08g0236800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 17.71 | 0.198 | 11.5 | -0.0668 | 0.695 | -0.32 | 0.405 | -0.327 | 0.0137 | 7.74 | 20.5 | 1411 | -- | -- |
| 17.9 | 0.197 | 11.5 | -0.00824 | 0.701 | -0.276 | 0.42 | -- | 0.0215 | 7.75 | 20.51 | 1473 | -- | -- |
| 18.17 | 0.199 | 11.5 | -0.0582 | 0.695 | -0.323 | -- | -0.338 | 0.0128 | 7.71 | 20.54 | 1354 | -- | -- |
| 18.36 | 0.2 | 11.5 | 0.00816 | 0.697 | -0.286 | -- | -- | 0.0266 | 7.75 | 20.5 | 1473 | -- | -- |
| 33.2 | 0.268 | 11.5 | 0.0153 | -- | -0.49 | -- | -0.0833 | 0.0921 | -- | 26.28 | 520 | -- | -- |
| 19.6 | 0.208 | 11.5 | -0.123 | 0.694 | -- | 0.439 | -- | -0.0365 | 7.8 | -- | -- | -- | -- |
| 20.15 | 0.21 | 11.5 | -0.112 | 0.694 | -- | -- | -- | -0.0371 | 7.79 | -- | -- | -- | -- |
| 33.15 | 0.268 | 11.5 | 0.0361 | -- | -0.489 | -- | -- | 0.115 | -- | 26.08 | 520 | -- | -- |
| 18.36 | 0.2 | 11.5 | -- | 0.697 | -0.284 | -- | -- | 0.0265 | 7.75 | 20.51 | 1473 | -- | -- |
| 46.24 | 0.318 | 11.5 | -0.104 | -- | -- | -- | -- | -0.0273 | -- | -- | -- | -- | -- |
| 20.48 | 0.212 | 11.5 | -- | 0.693 | -- | -- | -- | -0.0246 | 7.8 | -- | -- | -- | -- |
| 33.07 | 0.268 | 11.5 | -- | -- | -0.494 | -- | -- | 0.153 | -- | 25.65 | 507 | -- | -- |
| 46.52 | 0.318 | 11.5 | -- | -- | -- | -- | -- | -0.0159 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 16.84 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 23 | 3 |
| 2 | 16.84 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 22 | 5 |
| 12 | 16.88 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 22 | 5 |
| 14 | 16.89 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 1 |
| 15 | 16.89 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 23 | 3 |
| 18 | 16.90 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 31 | 16.94 | wind | 3.0 | 14400 | < th | dose independent | rect. | 22 | 5 |
| 35 | 16.96 | wind | 3.0 | 14400 | > th | dose independent | rect. | 22 | 5 |
| 38 | 16.97 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 2 |
| 49 | 16.98 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 6 | 22 |
| 55 | 17.01 | wind | 7.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 57 | 17.01 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 65 | 17.02 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 121 | 17.11 | wind | 3.0 | 14400 | > th | dose independent | rect. | 19 | 9 |
| 127 | 17.12 | wind | 3.0 | 14400 | > th | dose independent | rect. | 19 | 12 |
| 128 | 17.12 | wind | 3.0 | 14400 | < th | dose independent | rect. | 19 | 12 |
| 131 | 17.13 | wind | 3.0 | 14400 | > th | dose independent | sin | 11 | NA |
| 145 | 17.14 | wind | 3.0 | 14400 | < th | dose independent | sin | 11 | NA |
| 148 | 17.14 | wind | 3.0 | 14400 | > th | dose independent | rect. | 19 | 14 |
| 161 | 17.15 | wind | 3.0 | 14400 | < th | dose independent | rect. | 22 | 15 |
| 175 | 17.16 | wind | 3.0 | 14400 | > th | dose independent | rect. | 22 | 14 |
| 198 | 17.18 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 23 | 5 |
| 239 | 17.20 | wind | 5.0 | 14400 | < th | dose dependent | sin | 10 | NA |
| 258 | 17.21 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 21 | 7 |
| 350 | 17.24 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 19 | 11 |
| 355 | 17.24 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 6 | 23 |
| 438 | 17.29 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 24 | 4 |
| 499 | 17.31 | wind | 1.0 | 14400 | > th | dose dependent | sin | 9 | NA |
| 584 | 17.34 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 616 | 17.35 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 641 | 17.36 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 718 | 17.39 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 7 | 10 |
| 771 | 17.42 | wind | 3.0 | 14400 | > th | dose independent | rect. | 5 | 6 |
| 831 | 17.43 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 22 |
| 833 | 17.44 | radiation | 10.0 | 4320 | > th | dose independent | rect. | 6 | 1 |
| 836 | 17.44 | temperature | 30.0 | 90 | < th | dose independent | rect. | 4 | 13 |
| 878 | 17.46 | wind | 3.0 | 14400 | > th | dose independent | rect. | 6 | 3 |
| 925 | 17.47 | wind | 3.0 | 14400 | < th | dose independent | rect. | 5 | 6 |
| 958 | 17.48 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 969 | 17.48 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 1000 | 17.49 | radiation | 10.0 | 4320 | > th | dose dependent | rect. | 6 | 1 |