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Os08g0225100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.4 (0.019) R2 : 0.516
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.854 (0.0461) R2dC : 0.371 R2C : 0.275
β3 : -0.757 (0.0531) R2dE : 0.222 R2E : 0.119
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.177 (0.0401) R2dN8 : 0.0266 R2N8 : 0.0154
σ : 0.357
deviance : 58.89
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C
peak time of C : 0.843
E
wheather : temperature
threshold : 25.8
memory length : 1338
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
54.93 0.348 10.3 0.448 0.851 -0.864 0.265 0.182 0.251 0.842 25.5 1351 -- --
54.93 0.345 10.3 0.403 0.848 -0.839 0.288 -- 0.231 0.828 25.66 1351 -- --
55.21 0.346 10.3 0.461 0.846 -0.862 -- 0.274 0.253 0.85 25.56 1360 -- --
55.24 0.346 10.3 0.387 0.846 -0.833 -- -- 0.232 0.855 25.6 1359 -- --
84.84 0.431 10.3 0.505 -- -1.35 -- 2.16 0.28 -- 25.56 1360 -- --
84.64 0.431 10.4 0.106 0.743 -- 0.123 -- 0.158 0.662 -- -- -- --
84.7 0.431 10.4 0.102 0.743 -- -- -- 0.157 0.675 -- -- -- --
86.35 0.435 10.3 0.284 -- -1.19 -- -- 0.231 -- 25.43 1624 -- --
58.89 0.357 10.4 -- 0.854 -0.757 -- -- 0.177 0.843 25.8 1338 -- --
119.28 0.51 10.3 0.128 -- -- -- -- 0.17 -- -- -- -- --
84.98 0.431 10.4 -- 0.745 -- -- -- 0.146 0.681 -- -- -- --
88.44 0.439 10.3 -- -- -1.15 -- -- 0.198 -- 25.43 1624 -- --
119.71 0.511 10.3 -- -- -- -- -- 0.156 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 53.60 temperature 25 1440 > th dose dependent rect. 15 1
2 53.85 temperature 25 1440 > th dose dependent rect. 13 6
31 54.48 temperature 25 1440 > th dose dependent rect. 17 1
43 54.61 temperature 25 1440 > th dose dependent sin 20 NA
116 55.02 humidity 70 1440 > th dose independent rect. 17 12
117 55.02 humidity 70 1440 > th dose independent rect. 17 14
121 55.03 humidity 70 1440 > th dose independent rect. 17 7
129 55.05 humidity 70 1440 > th dose independent rect. 17 5
134 55.06 humidity 70 1440 > th dose independent rect. 17 3
158 55.11 temperature 25 1440 > th dose dependent rect. 13 19
260 55.39 temperature 25 1440 > th dose dependent no NA NA
276 55.52 temperature 25 1440 > th dose dependent rect. 17 23
310 55.94 humidity 70 1440 > th dose independent sin 13 NA
376 56.70 humidity 80 1440 < th dose dependent rect. 15 6
407 57.00 temperature 10 1440 > th dose dependent rect. 15 4
414 57.03 humidity 50 1440 > th dose dependent rect. 11 11
416 57.05 humidity 90 1440 < th dose dependent rect. 12 10
423 57.08 temperature 10 1440 > th dose dependent rect. 17 1
432 57.11 humidity 80 1440 < th dose dependent rect. 17 3
461 57.23 humidity 50 1440 > th dose dependent rect. 15 6
464 57.25 temperature 30 1440 < th dose independent rect. 14 10
470 57.26 temperature 30 1440 < th dose independent rect. 14 15
475 57.27 temperature 30 1440 < th dose independent rect. 11 13
479 57.27 temperature 30 1440 < th dose independent rect. 11 18
483 57.28 temperature 30 1440 < th dose independent rect. 14 5
486 57.28 temperature 30 1440 < th dose independent rect. 11 8
504 57.29 temperature 30 1440 < th dose independent rect. 14 12
517 57.30 temperature 30 1440 < th dose independent sin 16 NA
521 57.30 humidity 70 1440 < th dose independent rect. 16 15
526 57.32 humidity 70 1440 < th dose independent rect. 16 4
537 57.32 humidity 80 1440 < th dose dependent sin 16 NA
542 57.33 temperature 30 1440 < th dose independent rect. 14 22
544 57.34 temperature 30 1440 > th dose independent rect. 14 5
600 57.41 temperature 30 1440 < th dose independent rect. 18 22
648 57.50 temperature 30 1440 > th dose independent sin 15 NA
680 57.53 temperature 30 1440 > th dose independent rect. 14 22
682 57.54 humidity 50 1440 > th dose dependent rect. 17 4
721 57.60 temperature 30 1440 < th dose independent rect. 9 7
725 57.60 temperature 30 1440 < th dose independent rect. 2 22
737 57.61 temperature 30 1440 < th dose independent rect. 2 17
738 57.61 temperature 30 1440 < th dose independent rect. 6 17
755 57.61 temperature 30 1440 < th dose independent rect. 6 23
758 57.62 temperature 30 1440 < th dose independent no NA NA
759 57.62 humidity 70 1440 < th dose independent sin 13 NA
761 57.62 temperature 30 1440 > th dose independent rect. 11 8
803 57.62 temperature 30 1440 < th dose independent rect. 23 20
805 57.62 temperature 30 1440 < th dose independent rect. 6 21
972 57.80 temperature 30 1440 > th dose independent rect. 17 23