Os08g0222100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os08g0222100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 98.86 | 0.467 | 2.69 | 4.05 | 0.0745 | -56.5 | 0.346 | 609 | -0.0392 | 8.84 | 70.2 | 23 | 19.3 | 0.459 |
| 123.99 | 0.523 | 3.11 | -0.006 | 0.0144 | 3.66 | 0.268 | -- | -0.0526 | 10.8 | 70.2 | 23 | 19.3 | 0.459 |
| 90.66 | 0.443 | 2.76 | 3.44 | 0.0899 | -56.2 | -- | 608 | -0.0567 | 6.55 | 70.58 | 23 | 19.3 | 0.383 |
| 87.77 | 0.436 | 3.1 | -0.00724 | 0.093 | 6.37 | -- | -- | -0.0758 | 9.06 | 72.69 | 22 | 19.3 | 0.366 |
| 90.4 | 0.443 | 2.75 | 3.45 | -- | -56.3 | -- | 614 | -0.0384 | -- | 71 | 23 | 19.3 | 0.375 |
| 154.71 | 0.583 | 3.12 | 0.0285 | 0.0214 | -- | 0.268 | -- | -0.0767 | 15.4 | -- | -- | -- | -- |
| 154.74 | 0.583 | 3.12 | 0.0335 | 0.0644 | -- | -- | -- | -0.0748 | 19.6 | -- | -- | -- | -- |
| 85.5 | 0.431 | 3.08 | -0.0512 | -- | 6.36 | -- | -- | -0.0437 | -- | 114.9 | 21 | 19.3 | 0.335 |
| 87.47 | 0.436 | 3.1 | -- | 0.0917 | 6.42 | -- | -- | -0.0361 | 7.34 | 75.14 | 22 | 19.3 | 0.356 |
| 154.96 | 0.582 | 3.11 | 0.0326 | -- | -- | -- | -- | -0.0757 | -- | -- | -- | -- | -- |
| 154.77 | 0.582 | 3.12 | -- | 0.0641 | -- | -- | -- | -0.0785 | 19.7 | -- | -- | -- | -- |
| 41.18 | 0.3 | 3.11 | -- | -- | 10.7 | -- | -- | -0.0494 | -- | 83.47 | 2 | 19.6 | 0.114 |
| 154.99 | 0.581 | 3.12 | -- | -- | -- | -- | -- | -0.0794 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 128.47 | humidity | 70.0 | 30 | < th | dose independent | rect. | 19 | 1 |
| 13 | 128.77 | humidity | 70.0 | 30 | < th | dose dependent | rect. | 19 | 1 |
| 72 | 139.12 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 19 | 2 |
| 78 | 139.98 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 19 | 4 |
| 81 | 140.14 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 19 | 1 |
| 84 | 140.14 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 19 | 1 |
| 88 | 140.14 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 19 | 1 |
| 90 | 140.14 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 19 | 1 |
| 94 | 140.14 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 19 | 1 |
| 114 | 140.14 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 20 | 23 |
| 117 | 140.14 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 19 | 1 |
| 156 | 141.37 | wind | 9.0 | 4320 | < th | dose independent | rect. | 19 | 1 |
| 169 | 141.64 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 19 | 7 |
| 172 | 141.70 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 19 | 10 |
| 242 | 144.40 | temperature | 25.0 | 30 | > th | dose independent | rect. | 19 | 1 |
| 245 | 144.66 | wind | 3.0 | 10 | > th | dose independent | rect. | 19 | 1 |
| 362 | 146.13 | temperature | 30.0 | 270 | > th | dose independent | rect. | 18 | 1 |
| 378 | 146.26 | humidity | 70.0 | 10 | < th | dose independent | sin | 11 | NA |
| 446 | 146.89 | wind | 3.0 | 10 | > th | dose independent | rect. | 19 | 4 |
| 454 | 147.07 | humidity | 70.0 | 10 | > th | dose independent | sin | 11 | NA |
| 464 | 147.37 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 19 | 2 |
| 546 | 147.94 | wind | 1.0 | 30 | > th | dose dependent | rect. | 19 | 2 |
| 616 | 148.42 | temperature | 15.0 | 30 | > th | dose independent | rect. | 21 | 22 |
| 650 | 148.63 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 19 | 3 |
| 703 | 148.88 | radiation | 1.0 | 270 | > th | dose independent | rect. | 18 | 1 |
| 741 | 149.01 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 11 | 8 |
| 826 | 149.35 | wind | 1.0 | 10 | > th | dose dependent | rect. | 19 | 5 |
| 841 | 149.39 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 18 | 1 |
| 874 | 149.44 | wind | 3.0 | 10 | > th | dose dependent | rect. | 19 | 14 |
| 889 | 149.54 | humidity | 50.0 | 270 | > th | dose independent | rect. | 20 | 23 |
| 903 | 149.60 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 19 | 2 |
| 905 | 149.60 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 19 | 2 |
| 924 | 149.62 | wind | 3.0 | 10 | > th | dose dependent | rect. | 19 | 11 |
| 952 | 149.68 | humidity | 70.0 | 270 | > th | dose independent | rect. | 17 | 12 |
| 978 | 149.82 | temperature | 30.0 | 270 | < th | dose independent | sin | 11 | NA |
| 983 | 149.83 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 19 | 5 |
| 986 | 149.84 | humidity | 80.0 | 270 | < th | dose dependent | sin | 12 | NA |
| 989 | 149.86 | wind | 7.0 | 30 | < th | dose independent | rect. | 19 | 2 |
| 1000 | 149.89 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 21 | 22 |