Os08g0203600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Leucine-rich repeat, plant specific containing protein.
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Os08g0203600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Leucine-rich repeat, plant specific containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 205.74 | 0.674 | 9.32 | -0.968 | 4.04 | 3.77 | -0.562 | -2.44 | 0.107 | 20.3 | 47.72 | 20 | 23 | -- |
| 213.78 | 0.681 | 9.31 | -0.892 | 4.09 | 3.93 | 0.764 | -- | 0.119 | 20.1 | 47.16 | 20 | 23.3 | -- |
| 206.39 | 0.669 | 9.32 | -0.956 | 4.08 | 3.82 | -- | -2.04 | 0.0952 | 20.3 | 47.35 | 20 | 23 | -- |
| 215.38 | 0.684 | 9.3 | -0.913 | 3.92 | 3.7 | -- | -- | 0.116 | 20.2 | 49 | 23 | 23.2 | -- |
| 306.26 | 0.82 | 9.2 | -0.87 | -- | 2.58 | -- | 0.0938 | 0.0819 | -- | -7.533 | 4 | 6.53 | -- |
| 303.69 | 0.817 | 9.25 | -0.847 | 2.46 | -- | 0.25 | -- | 0.0563 | 23.8 | -- | -- | -- | -- |
| 303.96 | 0.816 | 9.25 | -0.858 | 2.46 | -- | -- | -- | 0.0552 | 23.8 | -- | -- | -- | -- |
| 304.5 | 0.813 | 9.19 | -0.826 | -- | 2.56 | -- | -- | 0.104 | -- | -29.25 | 24 | 6.58 | -- |
| 236.65 | 0.716 | 9.29 | -- | 4.18 | 3.79 | -- | -- | 0.21 | 20.4 | 44.54 | 23 | 22.8 | -- |
| 684.02 | 1.22 | 9.2 | -0.785 | -- | -- | -- | -- | 0.0863 | -- | -- | -- | -- | -- |
| 323.34 | 0.841 | 9.23 | -- | 2.45 | -- | -- | -- | 0.151 | 23.8 | -- | -- | -- | -- |
| 323.26 | 0.837 | 9.18 | -- | -- | 2.53 | -- | -- | 0.174 | -- | -104.7 | 147 | 7.61 | -- |
| 700.28 | 1.24 | 9.18 | -- | -- | -- | -- | -- | 0.173 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 206.67 | humidity | 50 | 30 | > th | dose dependent | sin | 5 | NA |
| 13 | 211.58 | humidity | 90 | 30 | < th | dose dependent | sin | 6 | NA |
| 26 | 214.91 | humidity | 50 | 90 | > th | dose dependent | rect. | 1 | 16 |
| 33 | 216.43 | humidity | 90 | 10 | < th | dose dependent | rect. | 22 | 14 |
| 43 | 216.81 | humidity | 90 | 10 | < th | dose dependent | rect. | 20 | 16 |
| 45 | 217.07 | humidity | 60 | 90 | > th | dose dependent | rect. | 1 | 14 |
| 119 | 222.46 | humidity | 90 | 10 | < th | dose dependent | rect. | 6 | 6 |
| 186 | 225.15 | humidity | 50 | 10 | > th | dose dependent | rect. | 3 | 14 |
| 363 | 230.27 | humidity | 80 | 90 | > th | dose independent | rect. | 1 | 16 |
| 390 | 231.14 | humidity | 80 | 90 | > th | dose independent | rect. | 1 | 14 |
| 399 | 231.30 | humidity | 80 | 10 | > th | dose independent | rect. | 1 | 15 |
| 414 | 231.66 | humidity | 80 | 10 | > th | dose independent | rect. | 1 | 17 |
| 485 | 233.36 | radiation | 1 | 270 | > th | dose independent | sin | 5 | NA |
| 527 | 234.09 | radiation | 1 | 270 | < th | dose independent | sin | 5 | NA |
| 556 | 234.90 | humidity | 90 | 90 | < th | dose independent | rect. | 19 | 17 |
| 611 | 236.24 | humidity | 90 | 90 | < th | dose independent | sin | 3 | NA |
| 634 | 236.65 | humidity | 80 | 30 | < th | dose independent | rect. | 22 | 14 |
| 644 | 236.92 | humidity | 90 | 270 | < th | dose independent | rect. | 5 | 7 |
| 659 | 237.23 | humidity | 70 | 10 | > th | dose dependent | rect. | 3 | 9 |
| 676 | 237.51 | humidity | 80 | 10 | > th | dose independent | rect. | 3 | 15 |
| 690 | 237.74 | humidity | 80 | 10 | > th | dose independent | rect. | 3 | 13 |
| 701 | 237.96 | humidity | 80 | 10 | > th | dose independent | sin | 3 | NA |
| 811 | 239.35 | radiation | 1 | 270 | < th | dose dependent | sin | 5 | NA |
| 814 | 239.38 | humidity | 80 | 10 | > th | dose independent | rect. | 1 | 11 |
| 825 | 239.52 | radiation | 10 | 90 | < th | dose dependent | sin | 3 | NA |
| 850 | 240.01 | radiation | 1 | 270 | < th | dose independent | rect. | 24 | 15 |
| 854 | 240.03 | humidity | 80 | 10 | < th | dose independent | rect. | 22 | 16 |
| 923 | 240.88 | humidity | 80 | 90 | > th | dose dependent | rect. | 21 | 22 |
| 981 | 241.41 | radiation | 10 | 270 | < th | dose dependent | rect. | 24 | 15 |