Os08g0190700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os08g0190700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 291.11 | 0.802 | 4.08 | -0.845 | 0.0493 | 2.57 | -1.99 | 2.68 | -0.623 | 17.1 | 11.07 | 379 | -- | -- |
| 294.94 | 0.8 | 4.13 | -1.26 | 0.051 | 2.51 | -1.44 | -- | -0.729 | 17 | 15.41 | 356 | -- | -- |
| 296.81 | 0.802 | 4.1 | -1 | 0.372 | 2.4 | -- | 1.57 | -0.675 | 13 | 15.27 | 570 | -- | -- |
| 298.39 | 0.805 | 4.13 | -1.27 | 0.26 | 2.45 | -- | -- | -0.742 | 12.9 | 15.4 | 476 | -- | -- |
| 299.38 | 0.806 | 4.11 | -1.04 | -- | 2.45 | -- | 1.21 | -0.678 | -- | 15.26 | 395 | -- | -- |
| 369.59 | 0.901 | 4.06 | -0.698 | 0.782 | -- | -0.867 | -- | -0.359 | 17.1 | -- | -- | -- | -- |
| 371.48 | 0.903 | 4.06 | -0.699 | 0.777 | -- | -- | -- | -0.363 | 17.2 | -- | -- | -- | -- |
| 299.9 | 0.807 | 4.14 | -1.27 | -- | 2.5 | -- | -- | -0.745 | -- | 15.4 | 371 | -- | -- |
| 329.18 | 0.845 | 4.08 | -- | 0.286 | 1.71 | -- | -- | -0.539 | 12.8 | 21.9 | 508 | -- | -- |
| 403.1 | 0.938 | 4.05 | -0.726 | -- | -- | -- | -- | -0.383 | -- | -- | -- | -- | -- |
| 384.36 | 0.917 | 4.05 | -- | 0.789 | -- | -- | -- | -0.286 | 17.1 | -- | -- | -- | -- |
| 331.65 | 0.848 | 4.09 | -- | -- | 1.73 | -- | -- | -0.539 | -- | 21.65 | 412 | -- | -- |
| 417.02 | 0.953 | 4.04 | -- | -- | -- | -- | -- | -0.302 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 289.57 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 20 |
| 5 | 290.38 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 16 |
| 14 | 291.78 | temperature | 20 | 270 | > th | dose dependent | rect. | 12 | 23 |
| 23 | 292.06 | temperature | 15 | 270 | > th | dose dependent | rect. | 5 | 23 |
| 30 | 292.39 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 22 |
| 34 | 292.73 | temperature | 25 | 4320 | < th | dose independent | rect. | 20 | 14 |
| 41 | 292.98 | temperature | 10 | 720 | > th | dose dependent | sin | 1 | NA |
| 59 | 293.45 | temperature | 20 | 4320 | > th | dose dependent | rect. | 23 | 1 |
| 66 | 293.64 | temperature | 15 | 270 | > th | dose dependent | no | NA | NA |
| 72 | 293.73 | temperature | 25 | 4320 | < th | dose independent | sin | 10 | NA |
| 82 | 293.80 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 16 |
| 87 | 293.89 | temperature | 25 | 4320 | > th | dose independent | rect. | 20 | 14 |
| 123 | 294.30 | temperature | 10 | 720 | > th | dose dependent | rect. | 16 | 23 |
| 153 | 294.52 | temperature | 30 | 720 | < th | dose dependent | rect. | 5 | 16 |
| 174 | 294.65 | temperature | 20 | 1440 | > th | dose dependent | sin | 6 | NA |
| 205 | 294.88 | temperature | 25 | 4320 | > th | dose independent | sin | 10 | NA |
| 209 | 294.90 | temperature | 30 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 290 | 295.26 | temperature | 10 | 1440 | > th | dose dependent | sin | 4 | NA |
| 375 | 295.50 | temperature | 20 | 4320 | > th | dose dependent | rect. | 23 | 10 |
| 431 | 295.69 | temperature | 20 | 4320 | > th | dose dependent | sin | 9 | NA |
| 483 | 295.80 | temperature | 25 | 4320 | > th | dose independent | rect. | 16 | 14 |
| 803 | 296.61 | temperature | 30 | 4320 | < th | dose dependent | rect. | 20 | 5 |
| 929 | 296.86 | temperature | 30 | 4320 | < th | dose dependent | rect. | 20 | 15 |