Os08g0173300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os08g0173300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 604.09 | 1.15 | 5.89 | -0.331 | 1.35 | 2.66 | -1.15 | -5.98 | -0.921 | 4.55 | 19.2 | 729 | 0.3 | -- |
| 629.78 | 1.17 | 5.72 | 0.936 | 1.41 | 2.58 | 0.0169 | -- | -0.508 | 4.03 | 18.2 | 684 | 2.74e-05 | -- |
| 606.54 | 1.15 | 5.89 | -0.265 | 1.14 | 2.55 | -- | -5.34 | -0.92 | 4.32 | 19.1 | 748 | 0.864 | -- |
| 629.26 | 1.17 | 5.75 | 0.901 | 1.48 | 2.71 | -- | -- | -0.546 | 3.95 | 17.7 | 698 | 0.000184 | -- |
| 622.98 | 1.16 | 5.92 | -0.625 | -- | 2.36 | -- | -6.76 | -1 | -- | 18.91 | 810 | 3.29 | -- |
| 743.15 | 1.28 | 5.63 | 1.54 | 0.834 | -- | -0.895 | -- | -0.0612 | 7.4 | -- | -- | -- | -- |
| 745.34 | 1.28 | 5.63 | 1.52 | 0.832 | -- | -- | -- | -0.0595 | 7.42 | -- | -- | -- | -- |
| 656.36 | 1.19 | 5.76 | 0.956 | -- | 2.29 | -- | -- | -0.531 | -- | 17.34 | 780 | 3.12 | -- |
| 646.46 | 1.18 | 5.78 | -- | 1.61 | 3.02 | -- | -- | -0.695 | 3.86 | 17.6 | 713 | 0.0175 | -- |
| 782.26 | 1.31 | 5.65 | 1.54 | -- | -- | -- | -- | -0.0461 | -- | -- | -- | -- | -- |
| 806.58 | 1.33 | 5.67 | -- | 0.847 | -- | -- | -- | -0.229 | 7.3 | -- | -- | -- | -- |
| 678.6 | 1.21 | 5.79 | -- | -- | 2.55 | -- | -- | -0.664 | -- | 17.55 | 813 | 3.29 | -- |
| 844.63 | 1.36 | 5.69 | -- | -- | -- | -- | -- | -0.217 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 596.52 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 11 |
| 8 | 599.61 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 12 | 600.26 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 29 | 604.76 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 1 | NA |
| 31 | 604.87 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 23 | 14 |
| 38 | 605.82 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 2 | 9 |
| 39 | 605.85 | temperature | 20.0 | 720 | > th | dose dependent | sin | 6 | NA |
| 44 | 607.15 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 23 | 12 |
| 50 | 607.74 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 20 |
| 51 | 607.76 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 70 | 609.79 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 79 | 610.57 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 12 | 13 |
| 89 | 610.84 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 17 |
| 114 | 612.21 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 120 | 612.71 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 18 | NA |
| 124 | 612.78 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 125 | 612.78 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 131 | 612.96 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 22 | 18 |
| 140 | 613.40 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 22 | 21 |
| 147 | 613.54 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 154 | 613.77 | humidity | 60.0 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 176 | 614.39 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 179 | 614.44 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 5 | 11 |
| 182 | 614.60 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 11 | 21 |
| 195 | 614.82 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 18 | 22 |
| 197 | 614.87 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 11 | 18 |
| 221 | 615.15 | humidity | 60.0 | 14400 | > th | dose dependent | rect. | 12 | 3 |
| 247 | 615.39 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 6 | 23 |
| 254 | 615.45 | humidity | 70.0 | 14400 | > th | dose dependent | no | NA | NA |
| 276 | 615.61 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 14 | 23 |
| 317 | 615.94 | humidity | 90.0 | 14400 | > th | dose independent | sin | 2 | NA |
| 406 | 616.56 | humidity | 70.0 | 14400 | > th | dose dependent | sin | 5 | NA |
| 414 | 616.65 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 420 | 616.69 | humidity | 60.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 468 | 616.98 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 623 | 618.01 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 6 | 10 |
| 676 | 618.44 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 6 | 20 |
| 685 | 618.47 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 10 | 1 |
| 779 | 619.29 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 19 | 6 |
| 856 | 619.74 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 8 | 8 |
| 880 | 619.90 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 6 | 15 |
| 898 | 620.02 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 6 | 18 |
| 916 | 620.11 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 6 | 2 |
| 945 | 620.27 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 3 | 16 |
| 953 | 620.32 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 10 | 15 |
| 966 | 620.38 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 12 | 8 |
| 982 | 620.51 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 6 | 1 |