Os08g0172300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : HAT dimerisation domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os08g0172300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : HAT dimerisation domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 206.46 | 0.675 | 5.29 | -1.23 | 0.0451 | 2.14 | 1.8 | -0.669 | -0.77 | 20.9 | 18.96 | 90 | -- | -- |
| 206.85 | 0.67 | 5.28 | -1.12 | 0.0421 | 2.13 | 1.76 | -- | -0.736 | 20.9 | 18.74 | 91 | -- | -- |
| 212.49 | 0.679 | 5.29 | -1.33 | 0.324 | 1.91 | -- | -1.2 | -0.74 | 15.6 | 18.8 | 98 | -- | -- |
| 213.73 | 0.681 | 5.27 | -1.11 | 0.351 | 1.85 | -- | -- | -0.681 | 15.4 | 18.4 | 100 | -- | -- |
| 217.12 | 0.686 | 5.3 | -1.34 | -- | 2.16 | -- | -1.07 | -0.777 | -- | 18.9 | 94 | -- | -- |
| 261.8 | 0.759 | 5.2 | -0.681 | 1.01 | -- | -0.16 | -- | -0.369 | 15.3 | -- | -- | -- | -- |
| 261.86 | 0.758 | 5.2 | -0.684 | 1.01 | -- | -- | -- | -0.37 | 15.3 | -- | -- | -- | -- |
| 218.55 | 0.689 | 5.28 | -1.19 | -- | 2.15 | -- | -- | -0.74 | -- | 18.6 | 100 | -- | -- |
| 242.7 | 0.726 | 5.23 | -- | 0.517 | 1.38 | -- | -- | -0.499 | 15.4 | 19.2 | 93 | -- | -- |
| 319.18 | 0.835 | 5.2 | -0.727 | -- | -- | -- | -- | -0.397 | -- | -- | -- | -- | -- |
| 274.19 | 0.775 | 5.18 | -- | 1.02 | -- | -- | -- | -0.294 | 15.3 | -- | -- | -- | -- |
| 251.14 | 0.74 | 5.22 | -- | -- | 1.79 | -- | -- | -0.482 | -- | 24.1 | 66 | -- | -- |
| 333.1 | 0.852 | 5.18 | -- | -- | -- | -- | -- | -0.316 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 193.18 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 18 |
| 2 | 193.40 | temperature | 10 | 270 | > th | dose dependent | rect. | 5 | 22 |
| 4 | 193.87 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 21 |
| 15 | 195.50 | temperature | 10 | 90 | > th | dose dependent | sin | 3 | NA |
| 17 | 195.56 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 20 |
| 19 | 195.66 | temperature | 15 | 90 | > th | dose dependent | rect. | 8 | 19 |
| 75 | 199.07 | temperature | 30 | 90 | < th | dose dependent | sin | 3 | NA |
| 184 | 202.65 | temperature | 20 | 270 | > th | dose dependent | rect. | 22 | 14 |
| 190 | 202.93 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 14 |
| 228 | 203.50 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 23 |
| 289 | 205.00 | temperature | 20 | 270 | > th | dose dependent | rect. | 5 | 8 |
| 317 | 205.47 | temperature | 20 | 270 | > th | dose dependent | rect. | 16 | 22 |
| 338 | 205.87 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 12 |
| 417 | 207.40 | temperature | 20 | 90 | > th | dose dependent | no | NA | NA |
| 450 | 207.95 | temperature | 20 | 10 | > th | dose dependent | no | NA | NA |
| 459 | 208.04 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 500 | 208.51 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 558 | 209.21 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 562 | 209.28 | temperature | 20 | 90 | > th | dose dependent | rect. | 1 | 23 |
| 574 | 209.43 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 22 |
| 582 | 209.48 | temperature | 30 | 10 | < th | dose dependent | rect. | 4 | 14 |
| 625 | 210.20 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 629 | 210.24 | temperature | 20 | 720 | > th | dose dependent | rect. | 8 | 1 |
| 653 | 210.47 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 714 | 211.04 | temperature | 25 | 270 | < th | dose independent | rect. | 1 | 19 |
| 736 | 211.16 | temperature | 30 | 10 | < th | dose dependent | rect. | 4 | 17 |
| 748 | 211.27 | temperature | 20 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 785 | 211.58 | temperature | 30 | 270 | < th | dose independent | rect. | 2 | 15 |
| 790 | 211.62 | temperature | 25 | 270 | < th | dose independent | rect. | 24 | 21 |
| 815 | 211.82 | temperature | 20 | 14400 | > th | dose independent | rect. | 16 | 8 |
| 822 | 211.84 | temperature | 20 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 944 | 212.51 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 951 | 212.54 | temperature | 20 | 14400 | < th | dose independent | rect. | 16 | 9 |
| 998 | 212.75 | temperature | 20 | 14400 | > th | dose independent | sin | 17 | NA |