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Os08g0162500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.4 (0.0146) R2 : 0.0498
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.151 (0.0308) R2dN8 : 0.0643 R2N8 : 0.0498
σ : 0.276
deviance : 34.85
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
21.78 0.219 12.4 -0.652 0.203 -0.373 0.441 0.282 0.00677 6.98 1010 4359 -- --
21.99 0.218 12.4 -0.589 0.203 -0.388 0.417 -- 0.0212 6.99 1010 4378 -- --
22.28 0.22 12.4 -0.641 0.208 -0.375 -- 0.254 0.00546 6.89 1010 4375 -- --
22.43 0.221 12.4 -0.577 0.204 -0.38 -- -- 0.0214 6.91 1010 4366 -- --
24.46 0.23 12.4 -0.624 -- -0.378 -- 0.214 0.0121 -- 1010 4291 -- --
26.11 0.24 12.4 -0.482 0.217 -- 0.389 -- 0.0952 6.89 -- -- -- --
26.5 0.241 12.4 -0.476 0.219 -- -- -- 0.094 6.76 -- -- -- --
24.61 0.231 12.4 -0.576 -- -0.388 -- -- 0.0265 -- 1009 4289 -- --
30.57 0.257 12.4 -- 0.202 -0.264 -- -- 0.107 7.04 1011 4008 -- --
29.01 0.252 12.4 -0.471 -- -- -- -- 0.0983 -- -- -- -- --
32.46 0.267 12.4 -- 0.214 -- -- -- 0.147 6.89 -- -- -- --
32.72 0.266 12.4 -- -- -0.282 -- -- 0.107 -- 1011 3994 -- --
34.85 0.276 12.4 -- -- -- -- -- 0.151 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 21.19 humidity 60.0 43200 < th dose dependent rect. 12 2
3 21.22 wind 1.0 43200 < th dose independent rect. 7 1
6 21.28 wind 1.0 43200 > th dose independent rect. 7 1
8 21.31 humidity 60.0 43200 < th dose dependent rect. 11 20
9 21.31 humidity 60.0 43200 < th dose dependent rect. 11 22
14 21.33 humidity 60.0 43200 < th dose dependent rect. 11 11
35 21.36 precipitation 0.1 14400 > th dose independent rect. 1 7
36 21.36 precipitation 0.1 14400 < th dose independent rect. 1 7
39 21.36 precipitation 0.1 14400 < th dose dependent rect. 1 7
42 21.36 temperature 15.0 720 > th dose dependent rect. 9 12
47 21.36 humidity 60.0 43200 < th dose dependent rect. 16 23
57 21.38 humidity 60.0 43200 < th dose dependent sin 20 NA
60 21.38 humidity 60.0 43200 < th dose dependent no NA NA
69 21.38 humidity 60.0 43200 < th dose dependent rect. 4 17
94 21.38 humidity 60.0 43200 < th dose dependent rect. 8 23
95 21.38 humidity 60.0 43200 < th dose dependent rect. 18 23
103 21.39 humidity 60.0 43200 < th dose dependent rect. 8 14
104 21.39 humidity 60.0 43200 < th dose dependent rect. 5 15
133 21.39 humidity 60.0 43200 < th dose dependent rect. 8 21
148 21.39 humidity 60.0 43200 < th dose dependent rect. 20 23
154 21.40 precipitation 0.1 14400 > th dose dependent rect. 1 7
157 21.40 humidity 60.0 43200 < th dose dependent rect. 8 12
190 21.41 humidity 60.0 43200 < th dose dependent rect. 5 12
304 21.54 humidity 60.0 43200 < th dose independent rect. 19 18
321 21.56 humidity 70.0 43200 < th dose independent rect. 8 2
324 21.56 humidity 60.0 43200 < th dose independent rect. 21 16
339 21.57 humidity 60.0 43200 < th dose independent rect. 4 9
343 21.57 humidity 70.0 43200 < th dose dependent rect. 18 1
344 21.57 atmosphere 1010.0 4320 > th dose dependent rect. 21 1
354 21.58 humidity 80.0 43200 < th dose dependent rect. 8 1
357 21.58 humidity 70.0 43200 < th dose dependent rect. 8 4
367 21.59 humidity 70.0 43200 > th dose independent rect. 8 1
369 21.59 humidity 60.0 43200 > th dose independent rect. 4 9
373 21.59 humidity 60.0 43200 > th dose independent rect. 17 20
392 21.60 humidity 60.0 43200 < th dose independent rect. 16 8
395 21.60 humidity 50.0 43200 > th dose independent rect. 14 16
407 21.61 humidity 60.0 43200 > th dose independent rect. 12 1
408 21.61 humidity 60.0 43200 > th dose independent rect. 17 3
425 21.62 humidity 60.0 43200 < th dose independent sin 6 NA
427 21.62 humidity 60.0 43200 < th dose independent rect. 12 1
429 21.62 humidity 60.0 43200 < th dose independent rect. 17 3
431 21.62 humidity 50.0 43200 > th dose independent rect. 14 7
432 21.62 humidity 60.0 43200 > th dose independent rect. 17 7
443 21.62 temperature 25.0 720 > th dose independent rect. 8 13
449 21.62 humidity 60.0 43200 < th dose independent rect. 4 20
459 21.63 humidity 70.0 43200 < th dose independent rect. 5 5
469 21.63 humidity 60.0 43200 < th dose independent rect. 5 18
482 21.63 humidity 60.0 43200 < th dose independent rect. 8 22
489 21.63 wind 1.0 43200 < th dose dependent rect. 6 2
496 21.64 humidity 60.0 43200 < th dose independent no NA NA
498 21.64 humidity 50.0 43200 > th dose independent rect. 14 3
500 21.64 humidity 60.0 43200 > th dose independent rect. 8 5
514 21.64 humidity 60.0 43200 < th dose independent rect. 11 14
515 21.64 humidity 60.0 43200 > th dose independent rect. 22 15
520 21.64 humidity 60.0 43200 < th dose independent rect. 8 18
522 21.64 humidity 60.0 43200 > th dose independent rect. 5 19
527 21.64 humidity 60.0 43200 < th dose independent rect. 10 20
542 21.64 humidity 60.0 43200 < th dose independent rect. 21 23
543 21.64 atmosphere 1010.0 4320 > th dose dependent rect. 23 1
560 21.65 humidity 60.0 43200 < th dose independent sin 17 NA
562 21.65 precipitation 0.1 14400 < th dose independent rect. 5 2
570 21.65 humidity 60.0 43200 < th dose independent rect. 12 12
571 21.65 humidity 60.0 43200 > th dose independent rect. 11 13
576 21.65 humidity 60.0 43200 > th dose independent rect. 8 16
578 21.65 humidity 60.0 43200 < th dose independent rect. 7 16
635 21.65 precipitation 0.1 14400 < th dose dependent rect. 5 2
665 21.66 humidity 60.0 43200 > th dose independent rect. 4 16
697 21.66 humidity 60.0 43200 > th dose independent rect. 10 20
716 21.66 temperature 20.0 720 > th dose dependent sin 21 NA
727 21.67 humidity 60.0 43200 > th dose independent sin 17 NA
785 21.67 atmosphere 1010.0 4320 > th dose dependent rect. 19 11
791 21.68 humidity 60.0 43200 > th dose independent sin 2 NA
793 21.68 humidity 60.0 43200 > th dose independent no NA NA
829 21.68 humidity 60.0 43200 > th dose independent rect. 23 21
847 21.68 wind 5.0 43200 > th dose dependent rect. 16 1
870 21.69 humidity 50.0 43200 > th dose independent sin 14 NA
874 21.69 humidity 60.0 43200 > th dose independent sin 0 NA
879 21.69 humidity 60.0 43200 < th dose independent rect. 18 1
881 21.69 precipitation 0.1 14400 > th dose independent rect. 5 2
916 21.69 temperature 15.0 10 > th dose dependent sin 15 NA
980 21.70 atmosphere 1010.0 4320 > th dose dependent sin 11 NA