Os08g0159000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to DnaJ homolog subfamily C member 1.
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Os08g0159000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to DnaJ homolog subfamily C member 1.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 13.55 | 0.173 | 11.4 | 0.794 | 0.669 | -0.776 | -0.194 | 0.785 | 0.161 | 23.6 | 23.76 | 1365 | -- | -- |
| 13.88 | 0.174 | 11.4 | 0.575 | 0.68 | -0.774 | -0.246 | -- | 0.127 | 22.8 | 22.91 | 1900 | -- | -- |
| 13.66 | 0.172 | 11.4 | 0.799 | 0.701 | -0.815 | -- | 0.801 | 0.157 | 23.7 | 23.73 | 1273 | -- | -- |
| 13.88 | 0.174 | 11.4 | 0.602 | 0.749 | -0.763 | -- | -- | 0.118 | 23.6 | 23.02 | 1185 | -- | -- |
| 33.82 | 0.272 | 11.4 | 0.562 | -- | -0.955 | -- | 0.409 | 0.125 | -- | 23.04 | 1589 | -- | -- |
| 32.35 | 0.267 | 11.4 | 0.317 | 0.603 | -- | -0.265 | -- | -0.0265 | 23.3 | -- | -- | -- | -- |
| 32.65 | 0.268 | 11.4 | 0.328 | 0.604 | -- | -- | -- | -0.0257 | 23.3 | -- | -- | -- | -- |
| 33.12 | 0.269 | 11.4 | 0.512 | -- | -0.946 | -- | -- | 0.116 | -- | 22.65 | 1594 | -- | -- |
| 21.8 | 0.217 | 11.4 | -- | 0.723 | -0.629 | -- | -- | 0.0215 | 23.6 | 23.6 | 1181 | -- | -- |
| 55.5 | 0.348 | 11.4 | 0.343 | -- | -- | -- | -- | -0.0199 | -- | -- | -- | -- | -- |
| 35.49 | 0.279 | 11.4 | -- | 0.607 | -- | -- | -- | -0.0622 | 23.3 | -- | -- | -- | -- |
| 39.8 | 0.295 | 11.4 | -- | -- | -0.853 | -- | -- | 0.0479 | -- | 22.65 | 1594 | -- | -- |
| 58.61 | 0.357 | 11.4 | -- | -- | -- | -- | -- | -0.058 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 13.57 | temperature | 25 | 1440 | > th | dose dependent | rect. | 10 | 11 |
| 12 | 13.62 | temperature | 25 | 1440 | > th | dose dependent | sin | 19 | NA |
| 110 | 13.70 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 112 | 13.71 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 122 | 13.71 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 124 | 13.72 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 5 |
| 145 | 13.75 | temperature | 25 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 316 | 14.22 | temperature | 25 | 1440 | > th | dose independent | rect. | 20 | 1 |
| 317 | 14.22 | temperature | 25 | 1440 | > th | dose independent | rect. | 18 | 4 |
| 335 | 14.29 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 451 | 14.59 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 465 | 14.61 | temperature | 25 | 1440 | < th | dose independent | rect. | 19 | 3 |
| 547 | 14.70 | temperature | 25 | 1440 | < th | dose independent | rect. | 17 | 6 |
| 549 | 14.70 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 912 | 15.25 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 7 |
| 950 | 15.29 | temperature | 30 | 1440 | < th | dose independent | rect. | 7 | 9 |
| 952 | 15.29 | temperature | 30 | 1440 | < th | dose independent | rect. | 23 | 17 |
| 953 | 15.29 | temperature | 30 | 1440 | < th | dose independent | rect. | 19 | 21 |
| 983 | 15.31 | temperature | 30 | 1440 | < th | dose independent | rect. | 13 | 3 |