Os08g0158600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Cell wall invertase (EC 3.2.1.26).
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Os08g0158600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Cell wall invertase (EC 3.2.1.26).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 355.47 | 0.886 | 5.92 | -0.706 | 2.59 | 0.277 | -1.38 | -3.93 | -0.889 | 20.6 | 49.88 | 4344 | -- | -- |
| 381.73 | 0.91 | 5.83 | -0.753 | 2.53 | 0.413 | -1.64 | -- | -0.978 | 20.6 | 86 | 13334 | -- | -- |
| 361.59 | 0.886 | 5.92 | -0.662 | 2.6 | 0.275 | -- | -3.98 | -0.89 | 20.5 | 49.96 | 4343 | -- | -- |
| 373.19 | 0.9 | 5.86 | -0.563 | 2.54 | 1.07 | -- | -- | -1.07 | 20.5 | 81 | 29709 | -- | -- |
| 738.78 | 1.27 | 5.87 | -0.849 | -- | 0.957 | -- | -5.34 | -0.831 | -- | 49.8 | 4353 | -- | -- |
| 385.92 | 0.921 | 5.81 | -0.803 | 2.59 | -- | -1.52 | -- | -0.855 | 20.6 | -- | -- | -- | -- |
| 393.44 | 0.929 | 5.81 | -0.754 | 2.59 | -- | -- | -- | -0.854 | 20.6 | -- | -- | -- | -- |
| 723.52 | 1.25 | 5.82 | -0.368 | -- | 1.68 | -- | -- | -1.23 | -- | 78.7 | 29639 | -- | -- |
| 378.69 | 0.906 | 5.83 | -- | 2.59 | 1.49 | -- | -- | -0.935 | 20.5 | 74.11 | 47371 | -- | -- |
| 771.09 | 1.3 | 5.74 | -0.763 | -- | -- | -- | -- | -0.878 | -- | -- | -- | -- | -- |
| 408.4 | 0.945 | 5.79 | -- | 2.6 | -- | -- | -- | -0.77 | 20.5 | -- | -- | -- | -- |
| 726.02 | 1.25 | 5.77 | -- | -- | 1.82 | -- | -- | -1.09 | -- | 74.95 | 33842 | -- | -- |
| 786.46 | 1.31 | 5.72 | -- | -- | -- | -- | -- | -0.794 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 334.35 | wind | 1 | 14400 | < th | dose dependent | rect. | 8 | 3 |
| 3 | 336.83 | wind | 1 | 14400 | < th | dose dependent | rect. | 8 | 5 |
| 5 | 338.25 | wind | 1 | 14400 | < th | dose independent | rect. | 8 | 3 |
| 8 | 339.69 | wind | 1 | 14400 | > th | dose independent | rect. | 8 | 3 |
| 24 | 344.43 | wind | 1 | 14400 | < th | dose dependent | rect. | 11 | 2 |
| 33 | 345.54 | radiation | 30 | 4320 | < th | dose dependent | rect. | 11 | 1 |
| 42 | 345.94 | radiation | 30 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 43 | 345.94 | radiation | 10 | 43200 | > th | dose independent | rect. | 16 | 2 |
| 64 | 346.36 | radiation | 30 | 43200 | > th | dose independent | rect. | 15 | 17 |
| 67 | 346.47 | radiation | 20 | 43200 | < th | dose dependent | rect. | 16 | 1 |
| 68 | 346.53 | radiation | 10 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 86 | 346.68 | radiation | 20 | 43200 | < th | dose dependent | rect. | 15 | 4 |
| 88 | 346.68 | radiation | 20 | 43200 | < th | dose dependent | rect. | 15 | 13 |
| 90 | 346.69 | radiation | 20 | 43200 | < th | dose dependent | rect. | 15 | 7 |
| 93 | 346.69 | radiation | 20 | 43200 | < th | dose dependent | rect. | 15 | 11 |
| 114 | 346.86 | radiation | 1 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 131 | 347.01 | humidity | 50 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 137 | 347.13 | wind | 1 | 43200 | < th | dose dependent | rect. | 22 | 1 |
| 138 | 347.13 | wind | 1 | 43200 | < th | dose dependent | rect. | 18 | 9 |
| 144 | 347.24 | wind | 1 | 43200 | < th | dose independent | rect. | 20 | 7 |
| 145 | 347.25 | wind | 1 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 147 | 347.26 | radiation | 1 | 43200 | > th | dose dependent | rect. | 15 | 3 |
| 179 | 347.52 | wind | 1 | 43200 | < th | dose independent | rect. | 20 | 3 |
| 192 | 347.57 | radiation | 10 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 225 | 347.74 | wind | 1 | 43200 | < th | dose dependent | rect. | 20 | 7 |
| 229 | 347.77 | humidity | 50 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 252 | 347.86 | humidity | 50 | 43200 | < th | dose independent | rect. | 16 | 15 |
| 302 | 348.39 | wind | 1 | 43200 | < th | dose dependent | rect. | 22 | 3 |
| 304 | 348.41 | radiation | 10 | 43200 | < th | dose dependent | sin | 14 | NA |
| 308 | 348.45 | humidity | 50 | 43200 | < th | dose independent | rect. | 16 | 6 |
| 332 | 348.60 | wind | 1 | 43200 | < th | dose dependent | rect. | 20 | 3 |
| 342 | 348.68 | humidity | 50 | 43200 | > th | dose independent | rect. | 16 | 15 |
| 435 | 349.12 | radiation | 10 | 4320 | > th | dose independent | rect. | 11 | 1 |
| 451 | 349.19 | wind | 1 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 470 | 349.26 | radiation | 10 | 43200 | < th | dose independent | rect. | 15 | 8 |
| 472 | 349.26 | radiation | 10 | 43200 | < th | dose independent | rect. | 15 | 11 |
| 482 | 349.31 | wind | 1 | 43200 | < th | dose independent | rect. | 22 | 4 |
| 507 | 349.35 | humidity | 50 | 43200 | > th | dose independent | rect. | 16 | 8 |
| 545 | 349.45 | radiation | 40 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 561 | 349.50 | wind | 1 | 43200 | > th | dose independent | rect. | 20 | 6 |
| 575 | 349.59 | radiation | 10 | 43200 | < th | dose independent | sin | 16 | NA |
| 585 | 349.60 | temperature | 30 | 43200 | > th | dose independent | rect. | 18 | 15 |
| 608 | 349.67 | temperature | 30 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 627 | 349.74 | radiation | 40 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 632 | 349.78 | radiation | 10 | 43200 | < th | dose independent | rect. | 12 | 17 |
| 638 | 349.80 | radiation | 10 | 43200 | < th | dose independent | rect. | 12 | 6 |
| 655 | 349.83 | wind | 3 | 14400 | < th | dose independent | rect. | 2 | 13 |
| 660 | 349.85 | wind | 3 | 14400 | > th | dose independent | rect. | 1 | 14 |
| 682 | 349.87 | wind | 3 | 14400 | < th | dose dependent | sin | 3 | NA |
| 690 | 349.90 | temperature | 30 | 43200 | < th | dose independent | rect. | 21 | 12 |
| 698 | 349.91 | wind | 3 | 14400 | > th | dose independent | rect. | 2 | 5 |
| 707 | 349.95 | radiation | 1 | 43200 | > th | dose dependent | sin | 15 | NA |
| 723 | 349.98 | temperature | 30 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 737 | 349.99 | radiation | 10 | 43200 | > th | dose independent | sin | 14 | NA |
| 738 | 349.99 | temperature | 30 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 742 | 350.01 | temperature | 30 | 43200 | < th | dose independent | rect. | 23 | 10 |
| 750 | 350.06 | temperature | 30 | 43200 | < th | dose independent | rect. | 1 | 8 |
| 752 | 350.06 | wind | 3 | 14400 | < th | dose independent | rect. | 24 | 16 |
| 806 | 350.16 | humidity | 80 | 43200 | < th | dose dependent | rect. | 18 | 13 |
| 880 | 350.31 | wind | 3 | 14400 | < th | dose independent | rect. | 2 | 5 |
| 903 | 350.35 | humidity | 60 | 43200 | > th | dose independent | rect. | 12 | 1 |