Os08g0156600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Major facilitator superfamily protein.
FiT-DB / Search/ Help/ Sample detail
|
Os08g0156600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Major facilitator superfamily protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 188.61 | 0.645 | 12.2 | -0.184 | 1.27 | -3.1 | 2.23 | 1.85 | -0.204 | 4.13 | 17.1 | 230 | 5.02 | 20.4 |
| 191.34 | 0.644 | 12.2 | -0.407 | 1.39 | -2.99 | 1.95 | -- | -0.245 | 4.07 | 16.83 | 215 | 5.18 | 20.6 |
| 195.06 | 0.65 | 12.2 | -0.564 | 1.34 | -3.19 | -- | -0.712 | -0.324 | 4.39 | 15.64 | 207 | 4.88 | 21 |
| 195.63 | 0.651 | 12.2 | -0.463 | 1.34 | -3.15 | -- | -- | -0.28 | 4.67 | 16.56 | 184 | 5.07 | 20.9 |
| 241.15 | 0.723 | 12.2 | -0.129 | -- | -3.88 | -- | 0.000548 | -0.227 | -- | 16.32 | 166 | 5.6 | 20.4 |
| 303.44 | 0.817 | 12.3 | -1.05 | 2.96 | -- | 2.47 | -- | -0.677 | 4.48 | -- | -- | -- | -- |
| 319.83 | 0.837 | 12.3 | -1.07 | 2.98 | -- | -- | -- | -0.69 | 4.53 | -- | -- | -- | -- |
| 220.09 | 0.691 | 12.2 | -0.348 | -- | -4.25 | -- | -- | -0.199 | -- | 14.96 | 249 | 5.37 | 19.2 |
| 200.53 | 0.66 | 12.2 | -- | 1.27 | -3.31 | -- | -- | -0.23 | 4.59 | 16.38 | 200 | 4.93 | 21 |
| 793.32 | 1.32 | 12.3 | -0.95 | -- | -- | -- | -- | -0.611 | -- | -- | -- | -- | -- |
| 349.77 | 0.875 | 12.3 | -- | 2.96 | -- | -- | -- | -0.571 | 4.54 | -- | -- | -- | -- |
| 221.39 | 0.693 | 12.2 | -- | -- | -4.29 | -- | -- | -0.172 | -- | 15.37 | 238 | 5.33 | 19.2 |
| 817.14 | 1.33 | 12.3 | -- | -- | -- | -- | -- | -0.506 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 192.04 | temperature | 15 | 270 | > th | dose dependent | rect. | 5 | 20 |
| 2 | 192.88 | temperature | 10 | 270 | > th | dose dependent | rect. | 4 | 22 |
| 22 | 200.99 | temperature | 20 | 720 | > th | dose dependent | rect. | 6 | 3 |
| 25 | 202.01 | temperature | 20 | 720 | > th | dose dependent | sin | 4 | NA |
| 33 | 202.87 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 17 |
| 87 | 208.63 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 3 |
| 101 | 209.42 | temperature | 20 | 4320 | > th | dose independent | rect. | 23 | 1 |
| 109 | 209.72 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 4 |
| 135 | 210.73 | temperature | 10 | 720 | > th | dose dependent | rect. | 5 | 6 |
| 137 | 210.78 | temperature | 20 | 4320 | < th | dose independent | rect. | 23 | 1 |
| 147 | 211.01 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 1 |
| 149 | 211.06 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 154 | 211.16 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 7 |
| 177 | 211.64 | temperature | 15 | 1440 | > th | dose dependent | rect. | 24 | 4 |
| 235 | 212.27 | temperature | 25 | 1440 | < th | dose dependent | rect. | 24 | 1 |
| 298 | 212.82 | temperature | 30 | 90 | < th | dose dependent | rect. | 1 | 22 |
| 322 | 213.01 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 22 |
| 405 | 213.63 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 15 |
| 499 | 214.33 | temperature | 20 | 30 | > th | dose dependent | rect. | 23 | 21 |
| 564 | 214.83 | temperature | 25 | 1440 | < th | dose dependent | sin | 10 | NA |
| 573 | 214.96 | temperature | 30 | 1440 | < th | dose dependent | rect. | 5 | 1 |
| 597 | 215.15 | temperature | 15 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 690 | 215.75 | temperature | 20 | 4320 | > th | dose independent | sin | 12 | NA |
| 706 | 215.84 | temperature | 20 | 4320 | > th | dose independent | rect. | 1 | 1 |
| 724 | 215.91 | temperature | 20 | 1440 | > th | dose dependent | sin | 10 | NA |
| 831 | 216.39 | temperature | 20 | 270 | > th | dose dependent | rect. | 14 | 23 |
| 858 | 216.52 | temperature | 20 | 4320 | < th | dose independent | sin | 11 | NA |
| 901 | 216.77 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 959 | 217.11 | temperature | 20 | 1440 | > th | dose dependent | rect. | 19 | 3 |
| 960 | 217.12 | temperature | 30 | 720 | < th | dose dependent | rect. | 2 | 13 |
| 982 | 217.22 | temperature | 20 | 270 | > th | dose dependent | rect. | 12 | 23 |