BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0156600 Os08g0156600|AK121377
(499 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G47420.1 | chr3:17472541-17474209 REVERSE LENGTH=524 583 e-166
AT4G25220.1 | chr4:12921161-12922762 FORWARD LENGTH=505 544 e-155
AT1G30560.1 | chr1:10824761-10826293 FORWARD LENGTH=511 539 e-153
AT4G17550.1 | chr4:9777938-9779738 REVERSE LENGTH=545 499 e-141
AT2G13100.1 | chr2:5390206-5391764 FORWARD LENGTH=494 477 e-135
>AT3G47420.1 | chr3:17472541-17474209 REVERSE LENGTH=524
Length = 523
Score = 583 bits (1502), Expect = e-166, Method: Compositional matrix adjust.
Identities = 309/517 (59%), Positives = 371/517 (71%), Gaps = 18/517 (3%)
Query: 1 MAHSHEMTSRKPPGIRLF----GGITVLRTYQTLVLVLTFVAYTCFHMTRKIPSIVKSVL 56
+ S +KP GIR G YQ +VL++TF+AY +H RK SIVKS L
Sbjct: 4 LMQSEPEMEKKPIGIRFLERIKGSKLSYSAYQAIVLIVTFLAYASYHAARKTTSIVKSAL 63
Query: 57 DPQ---TKLGSS--PWGRLHTKNTLNIGWLPFNTIDGSALLGEIDVAFLAVYSVGMFFAG 111
DPQ T L S + + GW PFN DG+ LLGEIDVAFLAVY+ GM+FAG
Sbjct: 64 DPQSPDTGLNSLLLRFTSFGSSVKEEGGWAPFNGPDGTVLLGEIDVAFLAVYAFGMYFAG 123
Query: 112 HLGDRMDLRIFLTIGMFGTAVFTALFGAGYWLNIHNFYYFLVIQMIAGLFQAIGWPSVVA 171
HLGDRM+LRIFLT+GM GT +FT+LFG GYW NIH+FYYFL++QM+AGLFQ+ GWPSVVA
Sbjct: 124 HLGDRMNLRIFLTVGMIGTGLFTSLFGVGYWGNIHSFYYFLIMQMLAGLFQSSGWPSVVA 183
Query: 172 IVGNWFGKSKRGLIMGIWNAHTSVGNISGSLLAAFLLKFGWGWSFAIPSLIMVAVGLLVF 231
+VGNWF K KRGLIMGIWNAHTSVGNI+GSL+AA +L++GWGWSF +P +I+V +GL+ +
Sbjct: 184 VVGNWFNKKKRGLIMGIWNAHTSVGNITGSLIAAAMLRYGWGWSFVVPGVIIVVIGLVNY 243
Query: 232 VFLPVSPEVMEIDID---DGEISSVKDTTKEPLL----EPGQEVKHNAVGFLEAWKIPGV 284
FLPVSPE + + D D + ++ EPLL + + K AVGF+EAW+IPGV
Sbjct: 244 AFLPVSPENVGAERDEVLDSSSEKIGNSVNEPLLLSSSDSETDDKKRAVGFIEAWRIPGV 303
Query: 285 APFALCLFFSKLVAYTFLYWLPFYISHTPIGGEYLSDALAGSLSTIFDXXXXXXXXXXXH 344
APFALCLFF+KLVAYTFLYWLPFY+SHT I GEYLSD AG+LST+FD +
Sbjct: 304 APFALCLFFAKLVAYTFLYWLPFYVSHTAIEGEYLSDETAGNLSTMFDVGGVVGGIMAGY 363
Query: 345 ISDRLNARAVTAASFMYCAIPALFLYRTYGSMSIMWNICLMFITGMFVNGPYALITTAVS 404
ISDR+ ARA+TAASFMYC+IPALF YR+YG +S++ N LMF+TGM VNGPYALITTAVS
Sbjct: 364 ISDRIGARAITAASFMYCSIPALFFYRSYGHVSLLANASLMFLTGMLVNGPYALITTAVS 423
Query: 405 ADLGTHSSLNGNSRALATVTAIIDGTGSVGAAIGPLLTGYISSS-SWSAVFTXXXXXXXX 463
ADLGTHSSL GNSRALATVTAIIDGTGSVGAA+GPLLTGYISS SW+AVFT
Sbjct: 424 ADLGTHSSLKGNSRALATVTAIIDGTGSVGAAVGPLLTGYISSRGSWTAVFTMLMGAAFV 483
Query: 464 XXXXXTQLVCSELKGK-ATSNASKDVADAQGTYSDEV 499
T+LV +E+ K A S S++ D V
Sbjct: 484 AGLLLTRLVMAEVAEKIAESRPSEECRSPVDYVQDHV 520
>AT4G25220.1 | chr4:12921161-12922762 FORWARD LENGTH=505
Length = 504
Score = 544 bits (1401), Expect = e-155, Method: Compositional matrix adjust.
Identities = 275/477 (57%), Positives = 342/477 (71%), Gaps = 25/477 (5%)
Query: 11 KPPGIRLF-----GGITVLRTYQTLVLVLTFVAYTCFHMTRKIPSIVKSVLDPQTKLGSS 65
KP GI+ G + YQ LV +LTFVAY FH RK SIVK L T G
Sbjct: 15 KPWGIQFLEKFKRSGRLSFKQYQALVFILTFVAYIAFHAARKPNSIVKGTLSASTIEG-- 72
Query: 66 PWGRLHTKNTLNIGWLPFNTIDGSALLGEIDVAFLAVYSVGMFFAGHLGDRMDLRIFLTI 125
GW PF+ DG+ALLG+ID+AFL+VY+VGMF AGHLGDR+DLR FLTI
Sbjct: 73 -------------GWAPFDGPDGTALLGQIDLAFLSVYAVGMFVAGHLGDRLDLRTFLTI 119
Query: 126 GMFGTAVFTALFGAGYWLNIHNFYYFLVIQMIAGLFQAIGWPSVVAIVGNWFGKSKRGLI 185
GM GT +FTALFG +W N H+FYYFL +Q++AGLFQ+IGWP +VA++GNWF K +RG+I
Sbjct: 120 GMIGTGLFTALFGVAFWANFHSFYYFLAVQVMAGLFQSIGWPCIVAVLGNWFDKKRRGMI 179
Query: 186 MGIWNAHTSVGNISGSLLAAFLLKFGWGWSFAIPSLIMVAVGLLVFVFLPVSPEVMEIDI 245
MG+W+AHTS+GNI+GSL+A+ LL++GWGWSF P+ +M +G++V++FLPV+P +E +
Sbjct: 180 MGVWSAHTSLGNIAGSLIASGLLRYGWGWSFLGPAFLMTFLGIVVYLFLPVNPPTVEAER 239
Query: 246 DDGEISS---VKDTTKEPLLEPGQEV--KHNAVGFLEAWKIPGVAPFALCLFFSKLVAYT 300
D EI S + DT E LLE AVGF+ AWKIPGVAPFA CLFF+KLV+YT
Sbjct: 240 DGTEIDSTMRLGDTITESLLESRMSTGFDRKAVGFMAAWKIPGVAPFAFCLFFTKLVSYT 299
Query: 301 FLYWLPFYISHTPIGGEYLSDALAGSLSTIFDXXXXXXXXXXXHISDRLNARAVTAASFM 360
FLYWLPFY+SH IGGEYLS+ +G+LSTIFD +ISD+LN RA+TAA FM
Sbjct: 300 FLYWLPFYVSHNMIGGEYLSEETSGNLSTIFDVGGVVGGVLAGYISDQLNGRAITAAGFM 359
Query: 361 YCAIPALFLYRTYGSMSIMWNICLMFITGMFVNGPYALITTAVSADLGTHSSLNGNSRAL 420
Y AIPALFLYR +G +S+ N+ LMF +G+F+ GP+ALITTAVSADLGTH SL GN+RAL
Sbjct: 360 YLAIPALFLYRVFGHISLTINVILMFTSGVFIIGPFALITTAVSADLGTHKSLKGNARAL 419
Query: 421 ATVTAIIDGTGSVGAAIGPLLTGYISSSSWSAVFTXXXXXXXXXXXXXTQLVCSELK 477
ATV+AIIDGTGSVGAAIGP+LTGYIS+ SW AVF T+L+ +E+K
Sbjct: 420 ATVSAIIDGTGSVGAAIGPVLTGYISAISWDAVFYMLMTAALISGLLLTKLIIAEVK 476
>AT1G30560.1 | chr1:10824761-10826293 FORWARD LENGTH=511
Length = 510
Score = 539 bits (1388), Expect = e-153, Method: Compositional matrix adjust.
Identities = 278/487 (57%), Positives = 338/487 (69%), Gaps = 18/487 (3%)
Query: 11 KPPGIRLF-----GGITVLRTYQTLVLVLTFVAYTCFHMTRKIPSIVKSVLDPQTKLGSS 65
KPPGI G + YQ +V VLTF+AY FH TRK SIVK L Q
Sbjct: 15 KPPGIHFLERFRRSGKLSFKQYQAMVFVLTFIAYIAFHATRKPNSIVKGTLSEQ------ 68
Query: 66 PWGRLHTKNTLNIGWLPFNTIDGSALLGEIDVAFLAVYSVGMFFAGHLGDRMDLRIFLTI 125
P G H K GW PF+ DG+ALLG+ID+AFL+VY+VGMF AGHLGDR+DLR FLTI
Sbjct: 69 PTG--HFKGADKGGWAPFDGPDGTALLGQIDLAFLSVYAVGMFVAGHLGDRLDLRTFLTI 126
Query: 126 GMFGTAVFTALFGAGYWLNIHNFYYFLVIQMIAGLFQAIGWPSVVAIVGNWFGKSKRGLI 185
GM GT V TALFG +W NIH FYYFL IQ +AG FQ+IGWP VVA++GNWF K +RG+I
Sbjct: 127 GMVGTGVCTALFGVAFWANIHAFYYFLAIQTLAGWFQSIGWPCVVAVLGNWFDKKRRGVI 186
Query: 186 MGIWNAHTSVGNISGSLLAAFLLKFGWGWSFAIPSLIMVAVGLLVFVFLPVSPEVMEIDI 245
MG+W+AHTS+GNI G+L+A LLKFGWGWSF P+L++ +G++V++FLPV+P +E +
Sbjct: 187 MGVWSAHTSLGNIIGTLIATGLLKFGWGWSFVGPALLITFLGIVVYLFLPVNPHAVEAER 246
Query: 246 DDGEISS---VKDTTKEPLLEPGQEV--KHNAVGFLEAWKIPGVAPFALCLFFSKLVAYT 300
D E+ S + DT E L AVGFL AWKIPGVAPFA CLFF+KLV+YT
Sbjct: 247 DGSEVDSTMRLGDTITESFLSSRTSTGFDRRAVGFLAAWKIPGVAPFAFCLFFTKLVSYT 306
Query: 301 FLYWLPFYISHTPIGGEYLSDALAGSLSTIFDXXXXXXXXXXXHISDRLNARAVTAASFM 360
FLYWLPFY+S T IGGE LS +G+LST+FD + SD+L+ RA+TA F+
Sbjct: 307 FLYWLPFYVSQTEIGGEQLSQETSGNLSTLFDVGGVVGGILAGYFSDQLDGRAITAGGFI 366
Query: 361 YCAIPALFLYRTYGSMSIMWNICLMFITGMFVNGPYALITTAVSADLGTHSSLNGNSRAL 420
Y IPALFLYR YG +S+ NI LMF+ G+FVNGPYALITTAV+ADLGTH SL GN+RAL
Sbjct: 367 YLTIPALFLYRIYGHVSMTINIILMFVAGLFVNGPYALITTAVAADLGTHKSLKGNARAL 426
Query: 421 ATVTAIIDGTGSVGAAIGPLLTGYISSSSWSAVFTXXXXXXXXXXXXXTQLVCSELKGKA 480
ATVTAIIDGTGSVGAAIGP+LTGYI++ SW AVF T L+ E+K
Sbjct: 427 ATVTAIIDGTGSVGAAIGPVLTGYIAAISWDAVFYMLMTAALISGLLLTTLIIEEVKTLL 486
Query: 481 TSNASKD 487
++ +D
Sbjct: 487 YGSSEED 493
>AT4G17550.1 | chr4:9777938-9779738 REVERSE LENGTH=545
Length = 544
Score = 499 bits (1284), Expect = e-141, Method: Compositional matrix adjust.
Identities = 276/523 (52%), Positives = 345/523 (65%), Gaps = 50/523 (9%)
Query: 7 MTSRK--PPGI----RLFGGITVLRTYQTLVLVLTFVAYTCFHMTRKIPSIVKSVLDPQT 60
M S++ PPGI R+ G +T++ +L +TF+AY C+H +RK SIVKSVL P +
Sbjct: 3 MNSKRKTPPGIALLRRVRGRNWSPKTFRYAILFITFIAYACYHASRKPSSIVKSVLHPDS 62
Query: 61 -----------KLGSSPWGRLHTKNTL-----------NIGWLPFNTIDGSALLGEIDVA 98
K+ P G + K + + GW PFN DG++ LGEIDVA
Sbjct: 63 STKPPQEHNSDKIYPWPMGNVFVKREIGDIDEVLLHRKSKGWEPFNGKDGTSRLGEIDVA 122
Query: 99 FLAVYSVGMFFAGHLGDRMDLRIFLTIGMFGTAVFTALFGAGYWLNIHNFYYFLVIQMIA 158
FLA YS+GM+ AGHLGD +DLR+FLT GM G+ F LFG GY+ NIH F++FLV+QM A
Sbjct: 123 FLACYSIGMYVAGHLGDSLDLRLFLTWGMIGSGFFVGLFGMGYFWNIHAFWFFLVMQMAA 182
Query: 159 GLFQAIGWPSVVAIVGNWFGKSKRGLIMGIWNAHTSVGNISGSLLAAFLLKFGWGWSFAI 218
GLFQA GWPSVVA+VGNWFGK KRGLIMGIWNAHTSVGNI GSL+AA +L++GWGWSF
Sbjct: 183 GLFQATGWPSVVAVVGNWFGKRKRGLIMGIWNAHTSVGNICGSLIAAGVLEYGWGWSFIA 242
Query: 219 PSLIMVAVGLLVFVFLPVSPEVM---EIDIDDGE-ISSVKDTTKEPLL---EPGQEV--- 268
P +M G+LV++FL PE + +I+ + G+ I +D +E + G +V
Sbjct: 243 PGFVMSLGGVLVYLFLAAYPEDVGFPDINSNSGKFIKRKRDVEEEEEEVEEDLGTDVEGD 302
Query: 269 ------------KHNAVGFLEAWKIPGVAPFALCLFFSKLVAYTFLYWLPFYISHTPIGG 316
+VG L+A IPGV PFALCLFFSKLVAYTFLYWLPFY+S T IGG
Sbjct: 303 GEGSSGSGSGYENKRSVGLLQACMIPGVIPFALCLFFSKLVAYTFLYWLPFYLSQTTIGG 362
Query: 317 EYLSDALAGSLSTIFDXXXXXXXXXXXHISDRLNARAVTAASFMYCAIPALFLYRTYGSM 376
EY+S AG+LST+FD +ISD+ ARA TAA+FMY AIPA+ +Y +YG +
Sbjct: 363 EYVSVKTAGNLSTLFDVGGIVGGILCGYISDKFKARATTAAAFMYAAIPAMLVYHSYGGV 422
Query: 377 SIMWNICLMFITGMFVNGPYALITTAVSADLGTHSSLNGNSRALATVTAIIDGTGSVGAA 436
S NI LM + G+FVNGPYALITTAVSADLGTH SL G+SRALATVTAIIDGTGS GAA
Sbjct: 423 SQTVNILLMMVAGLFVNGPYALITTAVSADLGTHKSLQGDSRALATVTAIIDGTGSAGAA 482
Query: 437 IGPLLTGYISSSSWSAVFTXXXXXXXXXXXXXTQLVCSELKGK 479
+GPLLTG++S+ W AVF T+LV +E++ K
Sbjct: 483 LGPLLTGFLSTLGWQAVFYMLVVGALCAGLLLTRLVIAEIREK 525
>AT2G13100.1 | chr2:5390206-5391764 FORWARD LENGTH=494
Length = 493
Score = 477 bits (1227), Expect = e-135, Method: Compositional matrix adjust.
Identities = 243/441 (55%), Positives = 322/441 (73%), Gaps = 24/441 (5%)
Query: 27 YQTLVLVLTFVAYTCFHMTRKIPSIVKSVLDPQTKLGSSPWGRLHTKNTLNIGWLPFNTI 86
+Q LVL++TF AY FH +RK PSIVKSVL P + L SS +++ GW PFN
Sbjct: 28 HQILVLIITFTAYASFHASRKPPSIVKSVLGPPS-LNSS---------SIDNGWAPFNGT 77
Query: 87 DGSALLGEIDVAFLAVYSVGMFFAGHLGDRMDLRIFLTIGMFGTAVFTALFGAGYWLNIH 146
G+ LGE+D+AFL+ Y++GM+FAGHLGDR+DLR FL GM G+ + T +FG GYW+N+H
Sbjct: 78 QGTKRLGELDLAFLSSYALGMYFAGHLGDRIDLRYFLVFGMMGSGILTLVFGLGYWMNVH 137
Query: 147 NFYYFLVIQMIAGLFQAIGWPSVVAIVGNWFGKSKRGLIMGIWNAHTSVGNISGSLLAAF 206
+++ +Q++ GLFQ+IGWP VV++VGNW GK KRGLIMG+WN+HTSVGNI GS++A+
Sbjct: 138 TLGFYMSVQIVCGLFQSIGWPCVVSVVGNWCGKEKRGLIMGLWNSHTSVGNILGSVIASS 197
Query: 207 LLKFGWGWSFAIPSLIMVAVGLLVFVFLPVSPEVM-------EIDIDDGEISSVKDTTKE 259
+L FGWGWSF +P ++++ G++VF+FL VSP + EI+I+ +V+++ ++
Sbjct: 198 VLDFGWGWSFVLPGVLVLVSGVVVFMFLVVSPNDLGFEELGKEIEIEMSLGENVEESLRK 257
Query: 260 PLLEPGQEVKHN------AVGFLEAWKIPGVAPFALCLFFSKLVAYTFLYWLPFYISHTP 313
E G + N A+GFLEAW++PGVAP+A CLFFSKLVAYTFLYWLP+Y+ HT
Sbjct: 258 HEAE-GAVLLENVDDSSFAIGFLEAWRLPGVAPYAFCLFFSKLVAYTFLYWLPYYLRHTA 316
Query: 314 IGGEYLSDALAGSLSTIFDXXXXXXXXXXXHISDRLNARAVTAASFMYCAIPALFLYRTY 373
+ G LS AG LST+FD ISD++ ARA+T+ +F+ +IPAL +YR Y
Sbjct: 317 VAGVNLSHKTAGILSTVFDVGGVLGGISAGFISDKIKARALTSITFLALSIPALIMYRVY 376
Query: 374 GSMSIMWNICLMFITGMFVNGPYALITTAVSADLGTHSSLNGNSRALATVTAIIDGTGSV 433
GS+S+ NI LMFI+G+ VNGPYALITTAV+ADLGT S+ GN RALATVTAIIDGTGSV
Sbjct: 377 GSVSMFINIVLMFISGLLVNGPYALITTAVAADLGTQDSIKGNGRALATVTAIIDGTGSV 436
Query: 434 GAAIGPLLTGYISSSSWSAVF 454
GAA+GPLL GYISS W++VF
Sbjct: 437 GAALGPLLAGYISSRGWNSVF 457
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.325 0.139 0.433
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,965,658
Number of extensions: 390775
Number of successful extensions: 1174
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 1163
Number of HSP's successfully gapped: 7
Length of query: 499
Length of database: 11,106,569
Length adjustment: 103
Effective length of query: 396
Effective length of database: 8,282,721
Effective search space: 3279957516
Effective search space used: 3279957516
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 114 (48.5 bits)