Os08g0152700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Diacylglycerol kinase, catalytic region domain containing protein.
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Os08g0152700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Diacylglycerol kinase, catalytic region domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 30.36 | 0.259 | 12.6 | -1.19 | 0.126 | -0.996 | 0.98 | 1.51 | -0.289 | 4.62 | 16.81 | 347 | -- | -- |
| 31.75 | 0.262 | 12.7 | -1.45 | 0.118 | -1.01 | 0.647 | -- | -0.361 | 4.73 | 16.19 | 333 | -- | -- |
| 32.17 | 0.266 | 12.7 | -1.4 | 0.315 | -1.06 | -- | 0.437 | -0.337 | 8.61 | 16.6 | 396 | -- | -- |
| 32.07 | 0.264 | 12.7 | -1.45 | 0.212 | -1.15 | -- | -- | -0.36 | 8.38 | 14.67 | 128 | -- | -- |
| 32.84 | 0.267 | 12.7 | -1.32 | -- | -1.13 | -- | 0.629 | -0.313 | -- | 16.52 | 313 | -- | -- |
| 43.78 | 0.31 | 12.7 | -1.69 | 0.433 | -- | 0.804 | -- | -0.516 | 5.16 | -- | -- | -- | -- |
| 45.39 | 0.316 | 12.7 | -1.69 | 0.44 | -- | -- | -- | -0.519 | 5.31 | -- | -- | -- | -- |
| 33.09 | 0.268 | 12.7 | -1.42 | -- | -1.22 | -- | -- | -0.343 | -- | 13.29 | 297 | -- | -- |
| 81.58 | 0.421 | 12.6 | -- | 0.185 | -1.84 | -- | -- | -0.117 | 13.2 | 13.1 | 212 | -- | -- |
| 55.48 | 0.348 | 12.7 | -1.67 | -- | -- | -- | -- | -0.509 | -- | -- | -- | -- | -- |
| 120.37 | 0.513 | 12.7 | -- | 0.411 | -- | -- | -- | -0.332 | 5.47 | -- | -- | -- | -- |
| 57.6 | 0.353 | 12.6 | -- | -- | -1.37 | -- | -- | 0.0707 | -- | 7.78 | 42290 | -- | -- |
| 129.18 | 0.53 | 12.7 | -- | -- | -- | -- | -- | -0.323 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 28.68 | humidity | 80 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 2 | 28.78 | humidity | 80 | 43200 | < th | dose independent | rect. | 20 | 2 |
| 4 | 28.97 | wind | 1 | 43200 | < th | dose dependent | rect. | 24 | 1 |
| 5 | 29.01 | humidity | 80 | 43200 | > th | dose independent | rect. | 19 | 4 |
| 7 | 29.03 | humidity | 80 | 43200 | < th | dose independent | rect. | 19 | 4 |
| 9 | 29.09 | humidity | 50 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 10 | 29.10 | humidity | 70 | 43200 | < th | dose dependent | rect. | 8 | 3 |
| 11 | 29.10 | humidity | 70 | 43200 | < th | dose dependent | rect. | 1 | 10 |
| 32 | 29.20 | humidity | 60 | 43200 | > th | dose independent | rect. | 24 | 12 |
| 34 | 29.20 | humidity | 60 | 43200 | < th | dose dependent | rect. | 15 | 21 |
| 41 | 29.25 | humidity | 60 | 43200 | < th | dose independent | sin | 8 | NA |
| 43 | 29.25 | humidity | 70 | 43200 | < th | dose dependent | rect. | 19 | 16 |
| 60 | 29.35 | humidity | 60 | 43200 | < th | dose dependent | rect. | 3 | 15 |
| 76 | 29.36 | humidity | 60 | 43200 | < th | dose dependent | rect. | 7 | 11 |
| 90 | 29.37 | humidity | 60 | 43200 | < th | dose independent | rect. | 24 | 12 |
| 122 | 29.39 | humidity | 60 | 43200 | < th | dose dependent | rect. | 6 | 23 |
| 124 | 29.40 | humidity | 60 | 43200 | < th | dose dependent | no | NA | NA |
| 139 | 29.40 | humidity | 60 | 43200 | < th | dose dependent | rect. | 7 | 21 |
| 159 | 29.41 | humidity | 60 | 43200 | < th | dose dependent | sin | 23 | NA |
| 206 | 29.42 | humidity | 60 | 43200 | < th | dose dependent | rect. | 10 | 23 |
| 237 | 29.46 | humidity | 50 | 43200 | > th | dose independent | rect. | 15 | 21 |
| 246 | 29.47 | humidity | 60 | 43200 | > th | dose independent | sin | 8 | NA |
| 257 | 29.49 | wind | 1 | 43200 | < th | dose independent | rect. | 24 | 1 |
| 298 | 29.55 | humidity | 60 | 43200 | < th | dose dependent | sin | 10 | NA |
| 371 | 29.72 | radiation | 20 | 43200 | < th | dose independent | rect. | 8 | 3 |
| 383 | 29.73 | radiation | 30 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 388 | 29.73 | wind | 3 | 43200 | > th | dose dependent | rect. | 14 | 1 |
| 393 | 29.74 | wind | 1 | 43200 | < th | dose independent | rect. | 23 | 3 |
| 394 | 29.74 | humidity | 70 | 43200 | < th | dose dependent | sin | 8 | NA |
| 410 | 29.76 | wind | 1 | 43200 | > th | dose independent | rect. | 24 | 1 |
| 419 | 29.77 | humidity | 70 | 43200 | > th | dose independent | rect. | 16 | 5 |
| 444 | 29.80 | wind | 1 | 43200 | < th | dose dependent | rect. | 13 | 13 |
| 449 | 29.81 | humidity | 50 | 43200 | > th | dose independent | rect. | 14 | 6 |
| 465 | 29.83 | wind | 5 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 475 | 29.84 | humidity | 70 | 43200 | < th | dose independent | rect. | 16 | 5 |
| 479 | 29.84 | wind | 9 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 491 | 29.86 | radiation | 40 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 495 | 29.87 | radiation | 30 | 43200 | < th | dose independent | rect. | 9 | 5 |
| 509 | 29.88 | humidity | 50 | 43200 | > th | dose independent | rect. | 14 | 15 |
| 516 | 29.89 | humidity | 60 | 43200 | > th | dose independent | rect. | 8 | 2 |
| 555 | 29.91 | wind | 1 | 43200 | < th | dose dependent | rect. | 10 | 18 |
| 562 | 29.92 | humidity | 70 | 43200 | < th | dose independent | rect. | 19 | 14 |
| 575 | 29.93 | wind | 1 | 43200 | < th | dose dependent | rect. | 21 | 5 |
| 588 | 29.96 | wind | 5 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 611 | 29.98 | wind | 1 | 43200 | < th | dose dependent | rect. | 15 | 11 |
| 646 | 30.02 | humidity | 50 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 660 | 30.03 | humidity | 70 | 43200 | < th | dose dependent | rect. | 17 | 2 |
| 683 | 30.04 | humidity | 70 | 43200 | < th | dose dependent | rect. | 19 | 1 |
| 685 | 30.04 | temperature | 10 | 270 | > th | dose dependent | rect. | 2 | 23 |
| 699 | 30.05 | wind | 1 | 43200 | < th | dose dependent | rect. | 8 | 20 |
| 705 | 30.06 | radiation | 20 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 707 | 30.06 | wind | 3 | 43200 | < th | dose dependent | rect. | 19 | 3 |
| 710 | 30.07 | humidity | 50 | 43200 | > th | dose independent | sin | 13 | NA |
| 711 | 30.07 | radiation | 20 | 43200 | < th | dose independent | sin | 7 | NA |
| 741 | 30.09 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 6 |
| 778 | 30.09 | radiation | 20 | 43200 | > th | dose dependent | rect. | 9 | 5 |
| 785 | 30.10 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 856 | 30.13 | wind | 1 | 43200 | > th | dose independent | rect. | 23 | 3 |
| 926 | 30.16 | wind | 3 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 928 | 30.16 | radiation | 20 | 43200 | > th | dose independent | rect. | 8 | 2 |
| 950 | 30.16 | humidity | 60 | 43200 | < th | dose independent | rect. | 24 | 22 |
| 963 | 30.17 | radiation | 40 | 43200 | > th | dose independent | rect. | 10 | 4 |
| 974 | 30.17 | wind | 1 | 43200 | < th | dose dependent | rect. | 19 | 7 |
| 977 | 30.17 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 12 |
| 982 | 30.18 | humidity | 60 | 43200 | < th | dose independent | no | NA | NA |