Os08g0152500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os08g0152500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 9.47 | 0.145 | 10.2 | 0.346 | 0.422 | 0.135 | 0.319 | -0.159 | 0.0295 | 1.38 | 20.5 | 271 | -- | -- |
| 9.57 | 0.144 | 10.2 | 0.321 | 0.425 | 0.153 | 0.293 | -- | 0.0289 | 1.31 | 20.5 | 338 | -- | -- |
| 9.76 | 0.146 | 10.2 | 0.354 | 0.446 | 0.138 | -- | -0.208 | 0.0333 | 1.38 | 20.57 | 585 | -- | -- |
| 9.87 | 0.146 | 10.2 | 0.308 | 0.422 | 0.141 | -- | -- | 0.0222 | 1.48 | 20.5 | 215 | -- | -- |
| 19.76 | 0.208 | 10.2 | 0.324 | -- | 0.248 | -- | 0.0828 | 0.0436 | -- | 20.57 | 585 | -- | -- |
| 10.34 | 0.151 | 10.2 | 0.27 | 0.441 | -- | 0.275 | -- | -0.00707 | 1.47 | -- | -- | -- | -- |
| 10.64 | 0.153 | 10.2 | 0.26 | 0.441 | -- | -- | -- | -0.00876 | 1.55 | -- | -- | -- | -- |
| 19.47 | 0.206 | 10.2 | 0.305 | -- | 0.273 | -- | -- | 0.0506 | -- | 20.3 | 87 | -- | -- |
| 12.15 | 0.162 | 10.2 | -- | 0.435 | 0.098 | -- | -- | -0.0289 | 1.57 | 20.5 | 160 | -- | -- |
| 22.56 | 0.222 | 10.2 | 0.278 | -- | -- | -- | -- | 0.000842 | -- | -- | -- | -- | -- |
| 12.43 | 0.165 | 10.2 | -- | 0.446 | -- | -- | -- | -0.0378 | 1.57 | -- | -- | -- | -- |
| 20.43 | 0.211 | 10.2 | -- | -- | 0.183 | -- | -- | 0.028 | -- | 25.97 | 3 | -- | -- |
| 24.6 | 0.232 | 10.2 | -- | -- | -- | -- | -- | -0.03 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 8.69 | humidity | 90 | 14400 | < th | dose independent | rect. | 2 | 5 |
| 11 | 8.94 | humidity | 90 | 14400 | > th | dose independent | rect. | 2 | 6 |
| 15 | 8.98 | humidity | 90 | 14400 | > th | dose independent | rect. | 4 | 3 |
| 48 | 9.12 | humidity | 90 | 14400 | < th | dose independent | sin | 8 | NA |
| 106 | 9.19 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 107 | 9.20 | humidity | 90 | 14400 | > th | dose independent | sin | 7 | NA |
| 121 | 9.20 | humidity | 90 | 14400 | > th | dose dependent | rect. | 4 | 4 |
| 122 | 9.20 | humidity | 80 | 14400 | > th | dose dependent | rect. | 1 | 7 |
| 313 | 9.31 | humidity | 90 | 14400 | < th | dose independent | rect. | 1 | 2 |
| 483 | 9.36 | humidity | 90 | 14400 | < th | dose independent | no | NA | NA |
| 508 | 9.36 | humidity | 90 | 14400 | > th | dose dependent | sin | 4 | NA |
| 515 | 9.37 | wind | 3 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 559 | 9.38 | wind | 3 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 583 | 9.38 | humidity | 80 | 14400 | > th | dose dependent | sin | 8 | NA |
| 585 | 9.38 | wind | 3 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 586 | 9.38 | humidity | 80 | 43200 | < th | dose dependent | rect. | 23 | 1 |
| 588 | 9.38 | wind | 3 | 43200 | < th | dose dependent | rect. | 6 | 4 |
| 599 | 9.39 | humidity | 90 | 14400 | > th | dose independent | no | NA | NA |
| 651 | 9.40 | humidity | 80 | 43200 | > th | dose independent | rect. | 24 | 1 |
| 653 | 9.40 | humidity | 80 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 698 | 9.40 | humidity | 90 | 14400 | > th | dose dependent | rect. | 17 | 16 |
| 703 | 9.40 | humidity | 90 | 14400 | > th | dose dependent | rect. | 15 | 17 |
| 749 | 9.41 | wind | 1 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 823 | 9.42 | humidity | 90 | 14400 | > th | dose independent | rect. | 4 | 23 |
| 920 | 9.43 | temperature | 20 | 270 | > th | dose independent | rect. | 6 | 21 |
| 927 | 9.43 | humidity | 90 | 14400 | > th | dose dependent | no | NA | NA |
| 964 | 9.44 | wind | 1 | 43200 | > th | dose independent | rect. | 8 | 2 |
| 996 | 9.44 | temperature | 20 | 270 | > th | dose independent | rect. | 8 | 18 |