Os08g0150600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os08g0150600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 193.36 | 0.653 | 5.82 | 1.9 | 1.16 | -0.548 | 1.05 | -0.934 | 0.891 | 23.8 | 70 | 1249 | -- | -- |
| 194.6 | 0.65 | 5.81 | 2.01 | 1.21 | -0.621 | 0.917 | -- | 0.895 | 23.7 | 68.95 | 1187 | -- | -- |
| 197.87 | 0.655 | 5.82 | 1.9 | 1.16 | -0.548 | -- | -0.565 | 0.891 | 23.8 | 70 | 1239 | -- | -- |
| 198.21 | 0.656 | 5.82 | 1.98 | 1.2 | -0.6 | -- | -- | 0.877 | 23.7 | 68.89 | 1175 | -- | -- |
| 254.12 | 0.747 | 5.79 | 1.92 | -- | -0.49 | -- | -0.0856 | 0.892 | -- | 73.16 | 1583 | -- | -- |
| 208.19 | 0.676 | 5.81 | 1.88 | 1.04 | -- | 0.797 | -- | 0.879 | 23.6 | -- | -- | -- | -- |
| 210.93 | 0.68 | 5.81 | 1.85 | 1.04 | -- | -- | -- | 0.876 | 23.6 | -- | -- | -- | -- |
| 254.16 | 0.746 | 5.79 | 1.92 | -- | -0.491 | -- | -- | 0.892 | -- | 73.16 | 1583 | -- | -- |
| 290.83 | 0.794 | 5.84 | -- | 1.2 | -0.825 | -- | -- | 0.798 | 23.7 | 84 | 2502 | -- | -- |
| 278.57 | 0.78 | 5.79 | 1.88 | -- | -- | -- | -- | 0.888 | -- | -- | -- | -- | -- |
| 301.32 | 0.812 | 5.86 | -- | 1.06 | -- | -- | -- | 0.67 | 23.8 | -- | -- | -- | -- |
| 323.43 | 0.84 | 5.83 | -- | -- | -0.65 | -- | -- | 0.702 | -- | 84 | 2502 | -- | -- |
| 371.91 | 0.9 | 5.84 | -- | -- | -- | -- | -- | 0.679 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 180.53 | wind | 9.0 | 14400 | < th | dose independent | rect. | 5 | 6 |
| 3 | 180.94 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 2 |
| 4 | 180.97 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 3 |
| 6 | 181.11 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 4 |
| 9 | 181.26 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 12 | 181.43 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 13 | 181.45 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 3 |
| 14 | 181.47 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 15 | 181.51 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 1 | 3 |
| 23 | 181.60 | wind | 9.0 | 14400 | > th | dose independent | rect. | 6 | 5 |
| 24 | 181.60 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 1 | 6 |
| 28 | 181.71 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 31 | 181.74 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 23 | 7 |
| 39 | 181.88 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 45 | 181.97 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 6 |
| 57 | 182.15 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 23 | 8 |
| 63 | 182.20 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 6 |
| 66 | 182.25 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 6 |
| 83 | 182.36 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 90 | 182.38 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 3 |
| 113 | 182.52 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 3 |
| 118 | 182.56 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 7 |
| 119 | 182.56 | wind | 3.0 | 43200 | < th | dose independent | rect. | 23 | 8 |
| 121 | 182.57 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 3 |
| 149 | 182.73 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 172 | 182.80 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 9 |
| 174 | 182.80 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 9 |
| 177 | 182.82 | wind | 3.0 | 43200 | > th | dose independent | rect. | 23 | 9 |
| 193 | 182.91 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 198 | 182.93 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 9 |
| 206 | 182.99 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 266 | 183.20 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 15 |
| 292 | 183.31 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 7 |
| 294 | 183.31 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 7 |
| 295 | 183.32 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 7 |
| 301 | 183.36 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 7 |
| 367 | 183.56 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 430 | 183.75 | wind | 9.0 | 14400 | > th | dose independent | rect. | 9 | 2 |
| 497 | 183.96 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 519 | 184.01 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 1 |
| 522 | 184.01 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 22 | NA |
| 555 | 184.09 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 6 | 15 |
| 564 | 184.11 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 6 | 17 |
| 593 | 184.17 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 12 | 9 |
| 648 | 184.30 | temperature | 20.0 | 270 | > th | dose independent | rect. | 20 | 18 |
| 656 | 184.31 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 6 | 5 |
| 663 | 184.32 | temperature | 20.0 | 30 | > th | dose independent | rect. | 20 | 9 |
| 719 | 184.45 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 3 | 20 |
| 741 | 184.48 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 7 | 1 |
| 780 | 184.56 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 789 | 184.59 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 793 | 184.59 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 799 | 184.60 | humidity | 90.0 | 14400 | > th | dose independent | sin | 20 | NA |
| 843 | 184.66 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 6 | 10 |
| 860 | 184.68 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 9 | 14 |
| 954 | 184.86 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 977 | 184.91 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 980 | 184.91 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 1 |