Os08g0150200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os08g0150200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 76.17 | 0.41 | 7.7 | 0.05 | 0.287 | -1.6 | 0.0333 | -1.51 | -0.579 | 16.1 | 25.2 | 5399 | -- | -- |
| 77.19 | 0.409 | 7.74 | -0.149 | 0.283 | -1.31 | 0.0254 | -- | -0.605 | 16 | 28.99 | 5364 | -- | -- |
| 76.15 | 0.406 | 7.7 | 0.044 | 0.287 | -1.63 | -- | -1.58 | -0.583 | 16.1 | 24.9 | 5411 | -- | -- |
| 77.19 | 0.409 | 7.74 | -0.142 | 0.282 | -1.3 | -- | -- | -0.601 | 15.9 | 29.07 | 5352 | -- | -- |
| 80.57 | 0.418 | 7.69 | 0.0483 | -- | -1.6 | -- | -1.59 | -0.583 | -- | 24.7 | 5392 | -- | -- |
| 103.91 | 0.478 | 7.68 | 0.487 | 0.24 | -- | 0.0636 | -- | -0.3 | 16.8 | -- | -- | -- | -- |
| 103.92 | 0.477 | 7.67 | 0.487 | 0.241 | -- | -- | -- | -0.299 | 16.8 | -- | -- | -- | -- |
| 80.73 | 0.418 | 7.73 | -0.123 | -- | -1.24 | -- | -- | -0.567 | -- | 30.58 | 4897 | -- | -- |
| 77.54 | 0.41 | 7.73 | -- | 0.263 | -1.2 | -- | -- | -0.538 | 15.8 | 31.39 | 5120 | -- | -- |
| 106.99 | 0.483 | 7.67 | 0.478 | -- | -- | -- | -- | -0.305 | -- | -- | -- | -- | -- |
| 110.17 | 0.491 | 7.69 | -- | 0.232 | -- | -- | -- | -0.353 | 16.8 | -- | -- | -- | -- |
| 80.96 | 0.419 | 7.73 | -- | -- | -1.17 | -- | -- | -0.539 | -- | 31.71 | 4880 | -- | -- |
| 113.01 | 0.496 | 7.68 | -- | -- | -- | -- | -- | -0.359 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 74.81 | temperature | 30 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 2 | 74.87 | temperature | 30 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 3 | 74.87 | temperature | 10 | 4320 | > th | dose dependent | rect. | 24 | 4 |
| 4 | 74.88 | temperature | 15 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 8 | 74.90 | temperature | 30 | 4320 | < th | dose dependent | rect. | 24 | 4 |
| 11 | 74.92 | temperature | 10 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 236 | 75.82 | temperature | 25 | 4320 | < th | dose dependent | sin | 10 | NA |
| 332 | 76.13 | temperature | 10 | 4320 | > th | dose dependent | sin | 10 | NA |
| 848 | 77.16 | temperature | 25 | 4320 | < th | dose dependent | no | NA | NA |
| 983 | 77.36 | temperature | 25 | 4320 | < th | dose dependent | rect. | 5 | 23 |
| 988 | 77.37 | temperature | 25 | 4320 | < th | dose dependent | rect. | 3 | 23 |