Os08g0145600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os08g0145600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 57.14 | 0.355 | 8.78 | -2.86 | 0.424 | 0.727 | 0.648 | 1.53 | -0.199 | 7.97 | 29.1 | 236 | -- | -- |
| 58.41 | 0.356 | 8.76 | -2.66 | 0.412 | 0.816 | 0.771 | -- | -0.142 | 8.11 | 28.86 | 248 | -- | -- |
| 58.31 | 0.356 | 8.78 | -2.86 | 0.424 | 0.727 | -- | 1.53 | -0.199 | 7.53 | 29.1 | 236 | -- | -- |
| 59.71 | 0.36 | 8.75 | -2.68 | 0.424 | 0.9 | -- | -- | -0.192 | 7.42 | 29.5 | 228 | -- | -- |
| 63.05 | 0.37 | 8.78 | -2.84 | -- | 0.945 | -- | 1.7 | -0.153 | -- | 28.47 | 408 | -- | -- |
| 79.02 | 0.417 | 8.76 | -2.8 | 0.776 | -- | 1 | -- | -0.21 | 6.29 | -- | -- | -- | -- |
| 81.39 | 0.422 | 8.77 | -2.79 | 0.783 | -- | -- | -- | -0.214 | 6.09 | -- | -- | -- | -- |
| 65.04 | 0.376 | 8.76 | -2.6 | -- | 1.09 | -- | -- | -0.113 | -- | 28.8 | 408 | -- | -- |
| 233.25 | 0.711 | 8.67 | -- | 0.442 | 1.19 | -- | -- | 0.261 | 7.58 | 28.3 | 1866 | -- | -- |
| 113.14 | 0.497 | 8.78 | -2.77 | -- | -- | -- | -- | -0.196 | -- | -- | -- | -- | -- |
| 286.48 | 0.792 | 8.7 | -- | 0.743 | -- | -- | -- | 0.0967 | 6.28 | -- | -- | -- | -- |
| 114.94 | 0.499 | 8.56 | -- | -- | 2.15 | -- | -- | 0.766 | -- | 20.43 | 47520 | -- | -- |
| 315.13 | 0.829 | 8.71 | -- | -- | -- | -- | -- | 0.111 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 56.21 | temperature | 25 | 270 | > th | dose dependent | rect. | 6 | 12 |
| 7 | 56.39 | temperature | 25 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 8 | 56.43 | temperature | 25 | 14400 | > th | dose independent | rect. | 8 | 4 |
| 9 | 56.43 | temperature | 25 | 14400 | < th | dose independent | rect. | 8 | 4 |
| 11 | 56.45 | temperature | 25 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 13 | 56.47 | temperature | 25 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 15 | 56.47 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 14 |
| 27 | 56.58 | temperature | 15 | 270 | > th | dose dependent | rect. | 4 | 14 |
| 30 | 56.59 | temperature | 25 | 14400 | < th | dose dependent | rect. | 7 | 3 |
| 33 | 56.62 | humidity | 90 | 14400 | > th | dose dependent | rect. | 6 | 10 |
| 40 | 56.67 | temperature | 30 | 270 | < th | dose independent | rect. | 7 | 16 |
| 57 | 56.77 | humidity | 90 | 14400 | > th | dose dependent | sin | 0 | NA |
| 89 | 56.96 | temperature | 25 | 14400 | > th | dose independent | rect. | 4 | 12 |
| 93 | 56.99 | temperature | 30 | 14400 | < th | dose dependent | rect. | 11 | 1 |
| 95 | 57.00 | temperature | 30 | 270 | < th | dose independent | rect. | 17 | 22 |
| 98 | 57.01 | temperature | 25 | 270 | > th | dose dependent | sin | 0 | NA |
| 123 | 57.10 | temperature | 25 | 14400 | < th | dose independent | rect. | 4 | 12 |
| 183 | 57.30 | humidity | 90 | 14400 | > th | dose dependent | rect. | 2 | 20 |
| 238 | 57.51 | temperature | 25 | 14400 | > th | dose independent | sin | 2 | NA |
| 260 | 57.56 | humidity | 90 | 14400 | > th | dose independent | rect. | 5 | 11 |
| 274 | 57.59 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 8 |
| 283 | 57.62 | temperature | 25 | 14400 | < th | dose independent | sin | 2 | NA |
| 287 | 57.63 | temperature | 20 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 298 | 57.66 | temperature | 25 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 318 | 57.70 | temperature | 25 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 339 | 57.76 | temperature | 25 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 371 | 57.83 | temperature | 10 | 14400 | > th | dose dependent | rect. | 9 | 3 |
| 389 | 57.86 | temperature | 20 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 407 | 57.89 | radiation | 40 | 720 | < th | dose independent | sin | 12 | NA |
| 408 | 57.89 | temperature | 10 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 446 | 57.99 | temperature | 20 | 720 | > th | dose dependent | rect. | 6 | 4 |
| 458 | 58.02 | humidity | 90 | 14400 | < th | dose independent | rect. | 6 | 10 |
| 499 | 58.09 | humidity | 90 | 14400 | > th | dose dependent | no | NA | NA |
| 509 | 58.10 | humidity | 90 | 14400 | > th | dose dependent | rect. | 14 | 23 |
| 524 | 58.12 | humidity | 90 | 14400 | > th | dose dependent | rect. | 9 | 23 |
| 525 | 58.13 | humidity | 90 | 14400 | > th | dose independent | sin | 1 | NA |
| 542 | 58.14 | humidity | 90 | 14400 | > th | dose dependent | rect. | 18 | 23 |
| 545 | 58.15 | temperature | 30 | 720 | < th | dose dependent | rect. | 7 | 4 |
| 632 | 58.28 | radiation | 40 | 720 | > th | dose independent | sin | 12 | NA |
| 709 | 58.40 | temperature | 25 | 720 | > th | dose dependent | rect. | 4 | 6 |
| 781 | 58.49 | temperature | 30 | 270 | < th | dose independent | rect. | 3 | 22 |
| 782 | 58.49 | humidity | 90 | 14400 | > th | dose dependent | rect. | 6 | 2 |
| 947 | 58.72 | humidity | 90 | 14400 | < th | dose independent | rect. | 6 | 2 |
| 950 | 58.72 | humidity | 90 | 14400 | > th | dose dependent | sin | 14 | NA |
| 963 | 58.74 | humidity | 90 | 14400 | < th | dose independent | sin | 1 | NA |
| 966 | 58.74 | humidity | 90 | 14400 | > th | dose independent | rect. | 2 | 18 |