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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os08g0141700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Pectinesterase inhibitor domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.05 (0.0123) R2 : 0.00149
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0213 (0.0259) R2dN8 : 0.00193 R2N8 : 0.00149
σ : 0.231
deviance : 24.55
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
23.33 0.227 3.05 0.0801 0.0723 -0.159 -0.026 -0.6 -0.00128 8.72 41.51 5900 -- --
23.74 0.227 3.05 0.043 0.0883 -0.182 -0.0388 -- -0.0189 8.67 38 7980 -- --
23.33 0.225 3.05 0.0794 0.0727 -0.161 -- -0.599 -0.00138 8.72 36.03 5896 -- --
23.74 0.227 3.05 0.0446 0.0882 -0.178 -- -- -0.0194 8.83 36 8020 -- --
23.63 0.226 3.06 0.08 -- -0.16 -- -0.596 -0.00104 -- 37.21 5854 -- --
24.25 0.231 3.04 0.0197 0.0708 -- -0.0316 -- 0.0228 8.7 -- -- -- --
24.25 0.231 3.04 0.0187 0.0707 -- -- -- 0.0229 8.75 -- -- -- --
24.06 0.228 3.05 0.0433 -- -0.184 -- -- -0.0163 -- 42.18 7263 -- --
23.79 0.227 3.05 -- 0.0867 -0.17 -- -- -0.0224 8.81 16.56 8021 -- --
24.54 0.231 3.05 0.0188 -- -- -- -- 0.0234 -- -- -- -- --
24.26 0.23 3.04 -- 0.0708 -- -- -- 0.0208 8.73 -- -- -- --
24.05 0.228 3.06 -- -- -0.2 -- -- -0.0222 -- -60.86 4375 -- --
24.55 0.231 3.05 -- -- -- -- -- 0.0213 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 19.65 temperature 25.0 30 > th dose dependent rect. 22 1
2 19.66 humidity 90.0 30 < th dose independent rect. 22 1
4 19.68 wind 9.0 1440 < th dose independent rect. 23 1
5 19.68 temperature 10.0 1440 > th dose independent rect. 23 1
8 19.68 temperature 30.0 1440 < th dose independent rect. 23 1
12 19.68 humidity 50.0 1440 > th dose independent rect. 23 1
22 19.68 atmosphere 995.0 1440 > th dose independent rect. 23 1
23 19.68 radiation 1.0 1440 < th dose independent rect. 23 1
43 19.68 temperature 10.0 1440 > th dose independent rect. 24 23
46 19.68 radiation 1.0 1440 < th dose dependent rect. 23 1
51 19.69 temperature 25.0 30 > th dose independent rect. 22 1
54 19.71 humidity 90.0 30 < th dose dependent rect. 22 1
56 19.73 atmosphere 1005.0 30 > th dose dependent rect. 22 1
57 19.75 wind 1.0 30 > th dose independent rect. 22 1
58 19.75 atmosphere 995.0 30 > th dose dependent rect. 22 1
60 19.76 atmosphere 1005.0 30 > th dose independent rect. 22 1
61 19.77 wind 3.0 30 < th dose independent rect. 22 1
65 19.77 temperature 10.0 30 > th dose independent rect. 22 1
67 19.77 temperature 30.0 30 < th dose independent rect. 22 1
68 19.77 humidity 50.0 30 > th dose independent rect. 22 1
71 19.77 atmosphere 995.0 30 > th dose independent rect. 22 1
72 19.77 atmosphere 1010.0 30 < th dose independent rect. 22 1
74 19.77 radiation 1.0 30 < th dose independent rect. 22 1
79 19.77 precipitation 0.1 30 < th dose independent rect. 22 1
80 19.77 temperature 10.0 30 > th dose independent rect. 23 23
81 19.77 wind 7.0 30 < th dose dependent rect. 22 1
83 19.77 radiation 1.0 30 < th dose dependent rect. 22 1
88 19.77 precipitation 0.1 30 < th dose dependent rect. 22 1
91 19.81 wind 9.0 30 < th dose independent rect. 23 23
92 19.81 humidity 50.0 30 > th dose dependent rect. 22 1
97 19.85 wind 1.0 30 > th dose dependent rect. 22 1
100 19.88 atmosphere 1015.0 30 < th dose dependent rect. 22 1
108 20.07 temperature 30.0 30 < th dose dependent rect. 22 1
167 21.33 atmosphere 995.0 30 > th dose independent rect. 23 23
173 22.08 atmosphere 1005.0 30 > th dose dependent rect. 20 3
174 22.09 temperature 25.0 30 > th dose independent rect. 20 3
182 22.27 precipitation 0.1 30 < th dose independent rect. 23 23
183 22.27 precipitation 0.1 30 < th dose dependent rect. 23 23
186 22.34 humidity 90.0 30 < th dose independent rect. 20 3
191 22.47 atmosphere 1005.0 30 > th dose independent rect. 20 3
193 22.48 atmosphere 1000.0 30 > th dose independent rect. 23 21
196 22.54 temperature 20.0 30 > th dose dependent rect. 20 3
199 22.60 precipitation 0.1 1440 < th dose independent rect. 23 1
201 22.60 precipitation 0.1 1440 < th dose dependent rect. 23 1
218 22.74 atmosphere 995.0 30 > th dose dependent rect. 23 21
230 22.83 wind 5.0 30 < th dose independent rect. 20 3
232 22.84 humidity 80.0 30 > th dose independent rect. 20 3
234 22.86 wind 1.0 30 > th dose independent rect. 20 3
252 22.96 temperature 10.0 1440 > th dose independent rect. 21 3
255 22.96 temperature 30.0 1440 < th dose independent rect. 21 3
259 22.96 humidity 50.0 1440 > th dose independent rect. 21 3
265 22.96 atmosphere 995.0 1440 > th dose independent rect. 21 3
266 22.96 radiation 1.0 1440 < th dose independent rect. 21 3
286 22.96 temperature 10.0 1440 > th dose independent rect. 24 21
289 22.96 humidity 50.0 30 > th dose independent rect. 23 23
290 22.96 radiation 30.0 1440 < th dose dependent rect. 21 3
292 22.96 radiation 20.0 43200 < th dose dependent rect. 21 3
299 22.97 wind 9.0 30 < th dose dependent rect. 20 3
301 22.97 radiation 10.0 1440 < th dose dependent rect. 21 3
310 22.98 precipitation 0.1 30 < th dose independent rect. 20 3
313 22.98 precipitation 0.1 30 < th dose dependent rect. 20 3
321 23.00 temperature 10.0 30 > th dose independent rect. 20 3
323 23.00 temperature 30.0 30 < th dose independent rect. 20 3
324 23.00 humidity 50.0 30 > th dose independent rect. 20 3
327 23.00 atmosphere 995.0 30 > th dose independent rect. 20 3
329 23.00 atmosphere 1010.0 30 < th dose independent rect. 20 3
331 23.00 radiation 1.0 30 < th dose independent rect. 20 3
337 23.00 temperature 10.0 30 > th dose independent rect. 23 21
338 23.00 radiation 1.0 30 < th dose dependent rect. 20 3
346 23.01 atmosphere 995.0 720 > th dose independent rect. 23 16
352 23.02 radiation 30.0 30 < th dose dependent rect. 23 12
354 23.02 atmosphere 995.0 30 > th dose dependent rect. 23 23
355 23.03 wind 9.0 30 < th dose independent rect. 23 21
364 23.05 radiation 20.0 10 < th dose independent rect. 23 11
387 23.06 precipitation 0.1 30 < th dose independent rect. 23 21
396 23.06 precipitation 0.1 30 < th dose dependent rect. 23 21
405 23.08 atmosphere 1015.0 30 < th dose independent rect. 23 23
409 23.09 precipitation 0.1 1440 < th dose independent rect. 21 3
410 23.09 atmosphere 1000.0 720 > th dose independent rect. 21 14
411 23.09 precipitation 0.1 1440 < th dose dependent rect. 21 3
413 23.09 humidity 80.0 14400 < th dose dependent rect. 3 6
417 23.10 atmosphere 1000.0 30 > th dose independent rect. 23 10
421 23.10 humidity 50.0 30 > th dose dependent rect. 20 3
424 23.11 temperature 30.0 30 < th dose independent rect. 23 21
425 23.11 atmosphere 1000.0 270 > th dose independent rect. 20 23
436 23.12 humidity 80.0 14400 < th dose dependent rect. 21 13
440 23.13 humidity 80.0 90 > th dose independent rect. 23 12
451 23.15 atmosphere 1000.0 30 > th dose independent rect. 23 8
452 23.15 humidity 90.0 30 < th dose independent rect. 7 16
458 23.15 radiation 20.0 10 < th dose dependent rect. 23 23
459 23.15 radiation 40.0 30 < th dose dependent rect. 23 23
471 23.17 humidity 70.0 14400 > th dose independent rect. 7 3
479 23.17 humidity 70.0 30 > th dose independent rect. 23 10
481 23.17 atmosphere 1000.0 720 > th dose independent rect. 23 10
494 23.17 humidity 50.0 30 > th dose dependent rect. 23 21
497 23.18 humidity 70.0 14400 < th dose independent rect. 8 2
501 23.18 radiation 40.0 30 < th dose independent rect. 23 21
503 23.18 radiation 40.0 30 < th dose independent rect. 23 23
506 23.18 temperature 10.0 30 > th dose dependent rect. 23 8
509 23.18 radiation 20.0 10 < th dose dependent rect. 23 21
531 23.19 humidity 90.0 30 < th dose independent rect. 3 20
533 23.19 radiation 10.0 30 < th dose independent rect. 23 21
534 23.19 temperature 30.0 10 < th dose independent rect. 23 23
545 23.20 radiation 40.0 720 < th dose independent rect. 15 8
550 23.20 humidity 90.0 30 < th dose independent rect. 9 14
551 23.20 humidity 50.0 30 > th dose independent rect. 23 21
553 23.20 atmosphere 1000.0 10 > th dose independent rect. 21 23
557 23.20 wind 9.0 30 < th dose dependent rect. 23 23
560 23.21 temperature 15.0 720 > th dose independent rect. 3 8
564 23.21 temperature 20.0 30 > th dose independent rect. 7 16
565 23.21 temperature 15.0 720 > th dose independent rect. 11 16
582 23.22 atmosphere 1000.0 90 > th dose independent rect. 23 12
584 23.22 temperature 10.0 30 > th dose dependent rect. 23 10
585 23.22 humidity 50.0 30 > th dose dependent rect. 23 10
586 23.22 humidity 50.0 90 > th dose dependent rect. 23 12
593 23.23 temperature 10.0 1440 > th dose independent rect. 24 8
596 23.23 temperature 30.0 1440 < th dose independent rect. 24 8
600 23.23 humidity 50.0 1440 > th dose independent rect. 24 8
605 23.23 atmosphere 995.0 1440 > th dose independent rect. 24 8
606 23.23 atmosphere 1015.0 720 < th dose independent rect. 3 8
608 23.23 temperature 20.0 30 > th dose independent rect. 9 14
609 23.23 temperature 10.0 1440 > th dose independent rect. 8 16
612 23.23 temperature 15.0 720 > th dose independent rect. 23 16
613 23.23 precipitation 0.1 30 < th dose independent rect. 7 16
618 23.23 humidity 80.0 4320 > th dose dependent rect. 6 4
623 23.23 precipitation 0.1 30 < th dose dependent rect. 7 16
625 23.24 atmosphere 995.0 720 > th dose independent rect. 3 8
627 23.24 wind 1.0 30 > th dose independent rect. 7 16
631 23.24 atmosphere 1000.0 270 > th dose independent rect. 21 21
635 23.24 humidity 70.0 4320 > th dose dependent rect. 3 8
642 23.25 temperature 10.0 720 > th dose independent rect. 15 8
648 23.25 radiation 10.0 30 < th dose independent rect. 23 23
649 23.25 wind 1.0 14400 < th dose dependent rect. 6 1
659 23.26 wind 1.0 14400 < th dose independent rect. 4 3
678 23.26 wind 9.0 30 < th dose independent rect. 7 16
681 23.26 humidity 80.0 4320 > th dose dependent rect. 8 1
683 23.26 humidity 90.0 30 < th dose dependent rect. 20 3
695 23.26 atmosphere 995.0 30 > th dose dependent rect. 23 10
702 23.27 wind 9.0 30 < th dose independent rect. 23 8
703 23.27 temperature 10.0 30 > th dose independent rect. 23 8
704 23.27 temperature 30.0 30 < th dose independent rect. 23 8
705 23.27 humidity 50.0 30 > th dose independent rect. 23 8
715 23.27 temperature 10.0 30 > th dose independent rect. 7 16
717 23.27 atmosphere 1015.0 30 < th dose independent rect. 7 16
731 23.28 wind 9.0 720 < th dose independent rect. 3 8
733 23.28 precipitation 0.1 30 < th dose independent rect. 23 8
735 23.28 temperature 10.0 1440 > th dose independent rect. 24 10
741 23.28 temperature 10.0 1440 > th dose independent rect. 10 14
750 23.28 atmosphere 1015.0 30 < th dose independent rect. 23 21
755 23.28 temperature 25.0 90 > th dose dependent rect. 20 7
758 23.28 radiation 40.0 30 < th dose dependent rect. 23 8
759 23.28 precipitation 0.1 30 < th dose dependent rect. 23 8
788 23.29 humidity 50.0 30 > th dose dependent rect. 23 23
789 23.30 humidity 80.0 90 < th dose independent rect. 2 1
793 23.30 wind 1.0 14400 > th dose independent rect. 4 3
800 23.30 precipitation 0.1 30 < th dose independent rect. 9 14
808 23.30 humidity 80.0 90 < th dose dependent rect. 2 1
809 23.30 humidity 90.0 10 < th dose dependent rect. 3 1
823 23.30 precipitation 0.1 30 < th dose dependent rect. 9 14
825 23.31 wind 3.0 270 > th dose independent rect. 19 1
826 23.31 humidity 90.0 10 < th dose independent rect. 3 1
855 23.31 wind 1.0 14400 < th dose dependent rect. 4 3
866 23.31 atmosphere 995.0 30 > th dose dependent rect. 23 8
875 23.31 wind 9.0 30 < th dose dependent rect. 23 21
891 23.32 wind 1.0 30 > th dose independent rect. 9 14
892 23.32 wind 9.0 30 < th dose independent rect. 9 14
941 23.33 wind 9.0 30 < th dose independent rect. 23 10
942 23.33 temperature 10.0 30 > th dose independent rect. 23 10
943 23.33 temperature 30.0 30 < th dose independent rect. 23 10
944 23.33 humidity 50.0 30 > th dose independent rect. 23 10
948 23.33 temperature 10.0 30 > th dose independent rect. 9 14
950 23.33 atmosphere 1015.0 30 < th dose independent rect. 9 14
961 23.33 humidity 50.0 4320 > th dose dependent rect. 5 4
981 23.33 temperature 10.0 30 > th dose dependent rect. 7 16
987 23.34 humidity 90.0 4320 < th dose independent rect. 4 5