Os08g0130900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycosyl transferase, family 31 protein.
FiT-DB / Search/ Help/ Sample detail
|
Os08g0130900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Glycosyl transferase, family 31 protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 108.31 | 0.489 | 7.64 | 0.168 | 1.01 | -1.01 | 0.119 | 0.786 | 0.125 | 22 | 29.8 | 1348 | -- | -- |
| 107.76 | 0.483 | 7.64 | 0.35 | 1.03 | -0.906 | 0.168 | -- | 0.078 | 22.1 | 29.56 | 1388 | -- | -- |
| 107.95 | 0.484 | 7.64 | 0.221 | 1.01 | -0.974 | -- | 0.487 | 0.0888 | 22.1 | 29.65 | 1348 | -- | -- |
| 107.76 | 0.483 | 7.64 | 0.334 | 1.01 | -0.936 | -- | -- | 0.0681 | 22.1 | 29.5 | 1357 | -- | -- |
| 148.05 | 0.567 | 7.61 | 0.26 | -- | -1.52 | -- | 0.314 | 0.0662 | -- | 29.6 | 911 | -- | -- |
| 152.83 | 0.58 | 7.64 | 0.659 | 1.08 | -- | 0.211 | -- | 0.0754 | 22.4 | -- | -- | -- | -- |
| 153.01 | 0.579 | 7.64 | 0.651 | 1.08 | -- | -- | -- | 0.0748 | 22.4 | -- | -- | -- | -- |
| 147.52 | 0.566 | 7.62 | 0.328 | -- | -1.49 | -- | -- | 0.0388 | -- | 29.49 | 921 | -- | -- |
| 110.62 | 0.49 | 7.65 | -- | 1.03 | -0.971 | -- | -- | 0.0404 | 22.1 | 29.5 | 1388 | -- | -- |
| 223.93 | 0.699 | 7.61 | 0.669 | -- | -- | -- | -- | 0.0787 | -- | -- | -- | -- | -- |
| 164.17 | 0.599 | 7.65 | -- | 1.08 | -- | -- | -- | 0.00233 | 22.5 | -- | -- | -- | -- |
| 150.23 | 0.571 | 7.63 | -- | -- | -1.54 | -- | -- | 0.0019 | -- | 29.49 | 923 | -- | -- |
| 235.73 | 0.717 | 7.63 | -- | -- | -- | -- | -- | 0.00448 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 104.89 | wind | 7 | 43200 | > th | dose dependent | rect. | 10 | 11 |
| 4 | 105.18 | wind | 9 | 43200 | > th | dose dependent | rect. | 13 | 8 |
| 9 | 105.40 | wind | 7 | 43200 | > th | dose dependent | rect. | 11 | 19 |
| 10 | 105.46 | wind | 9 | 43200 | > th | dose dependent | rect. | 13 | 17 |
| 14 | 105.58 | wind | 9 | 43200 | > th | dose independent | rect. | 13 | 17 |
| 18 | 105.69 | wind | 7 | 43200 | > th | dose independent | rect. | 10 | 6 |
| 21 | 105.71 | wind | 9 | 43200 | > th | dose dependent | rect. | 13 | 12 |
| 27 | 105.75 | wind | 9 | 43200 | < th | dose independent | rect. | 13 | 17 |
| 31 | 105.79 | wind | 9 | 43200 | < th | dose independent | rect. | 10 | 11 |
| 40 | 105.93 | wind | 7 | 43200 | < th | dose independent | rect. | 10 | 6 |
| 44 | 105.95 | wind | 7 | 43200 | > th | dose dependent | rect. | 10 | 8 |
| 52 | 106.02 | wind | 7 | 43200 | > th | dose independent | rect. | 10 | 12 |
| 55 | 106.04 | wind | 7 | 43200 | < th | dose independent | rect. | 12 | 2 |
| 61 | 106.10 | wind | 9 | 43200 | > th | dose independent | rect. | 13 | 12 |
| 63 | 106.13 | wind | 9 | 43200 | < th | dose independent | rect. | 13 | 8 |
| 76 | 106.20 | wind | 7 | 43200 | > th | dose dependent | rect. | 12 | 2 |
| 82 | 106.24 | wind | 9 | 43200 | < th | dose independent | rect. | 13 | 12 |
| 86 | 106.26 | wind | 7 | 43200 | > th | dose independent | rect. | 3 | 13 |
| 87 | 106.26 | wind | 7 | 43200 | > th | dose dependent | rect. | 10 | 6 |
| 88 | 106.28 | wind | 7 | 43200 | > th | dose independent | rect. | 12 | 2 |
| 100 | 106.35 | wind | 7 | 43200 | > th | dose independent | rect. | 3 | 15 |
| 103 | 106.37 | wind | 7 | 43200 | > th | dose independent | rect. | 3 | 18 |
| 104 | 106.38 | wind | 7 | 43200 | > th | dose independent | sin | 0 | NA |
| 130 | 106.54 | wind | 9 | 43200 | > th | dose independent | rect. | 13 | 8 |
| 135 | 106.55 | wind | 7 | 43200 | < th | dose independent | rect. | 3 | 13 |
| 143 | 106.61 | wind | 7 | 43200 | < th | dose independent | sin | 0 | NA |
| 144 | 106.61 | wind | 7 | 43200 | < th | dose independent | rect. | 3 | 18 |
| 148 | 106.63 | wind | 7 | 43200 | < th | dose independent | rect. | 3 | 15 |
| 170 | 106.73 | wind | 7 | 43200 | > th | dose dependent | sin | 18 | NA |
| 231 | 106.98 | wind | 9 | 43200 | > th | dose independent | sin | 17 | NA |
| 245 | 107.01 | wind | 9 | 43200 | < th | dose independent | sin | 18 | NA |
| 249 | 107.02 | wind | 9 | 43200 | < th | dose independent | rect. | 10 | 15 |
| 339 | 107.29 | wind | 7 | 43200 | > th | dose independent | rect. | 20 | 22 |
| 452 | 107.61 | wind | 7 | 43200 | < th | dose independent | rect. | 20 | 22 |
| 497 | 107.73 | wind | 7 | 43200 | > th | dose independent | rect. | 17 | 23 |
| 531 | 107.84 | wind | 5 | 43200 | > th | dose dependent | rect. | 3 | 14 |
| 550 | 107.91 | wind | 7 | 43200 | > th | dose independent | no | NA | NA |
| 576 | 107.98 | wind | 7 | 43200 | < th | dose independent | rect. | 17 | 23 |
| 615 | 108.13 | wind | 7 | 43200 | < th | dose independent | no | NA | NA |
| 616 | 108.14 | wind | 5 | 43200 | > th | dose dependent | sin | 0 | NA |
| 638 | 108.20 | wind | 5 | 43200 | > th | dose dependent | rect. | 3 | 18 |
| 677 | 108.35 | wind | 5 | 43200 | > th | dose dependent | rect. | 24 | 21 |
| 834 | 108.95 | wind | 5 | 43200 | > th | dose dependent | rect. | 19 | 23 |
| 841 | 108.98 | temperature | 25 | 1440 | > th | dose dependent | rect. | 17 | 2 |
| 899 | 109.19 | wind | 7 | 43200 | > th | dose dependent | rect. | 17 | 23 |
| 923 | 109.28 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 3 |
| 925 | 109.29 | temperature | 20 | 14400 | > th | dose independent | rect. | 21 | 2 |
| 927 | 109.29 | temperature | 25 | 1440 | > th | dose dependent | rect. | 4 | 5 |
| 931 | 109.31 | temperature | 20 | 14400 | < th | dose independent | rect. | 21 | 2 |
| 933 | 109.32 | wind | 5 | 43200 | > th | dose dependent | no | NA | NA |
| 945 | 109.36 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 7 |
| 947 | 109.36 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 19 |
| 951 | 109.38 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 15 |
| 962 | 109.40 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 22 |
| 995 | 109.46 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 21 |