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Os08g0129500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.82 (0.0124) R2 : 0.0326
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.102 (0.0261) R2dN8 : 0.0421 R2N8 : 0.0326
σ : 0.233
deviance : 24.99
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
15.97 0.188 9.82 0.012 0.235 -0.484 0.537 0.485 -0.105 17.5 86.02 1087 -- --
16.25 0.188 9.83 -0.019 0.252 -0.448 0.572 -- -0.11 17.7 85 1047 -- --
16.6 0.19 9.82 0.0125 0.244 -0.463 -- 0.499 -0.103 17 84.94 1070 -- --
16.8 0.191 9.82 -0.0288 0.231 -0.395 -- -- -0.112 16.3 85 1189 -- --
19.34 0.205 9.82 0.0429 -- -0.501 -- 0.434 -0.105 -- 85 1179 -- --
19.96 0.209 9.82 -0.085 0.287 -- 0.246 -- -0.106 15.6 -- -- -- --
20.12 0.21 9.82 -0.081 0.287 -- -- -- -0.105 15.3 -- -- -- --
19.47 0.206 9.82 -0.0334 -- -0.474 -- -- -0.115 -- 86 1197 -- --
16.81 0.191 9.82 -- 0.229 -0.405 -- -- -0.109 16.3 84.7 1184 -- --
24.77 0.233 9.82 -0.0931 -- -- -- -- -0.113 -- -- -- -- --
20.29 0.211 9.82 -- 0.289 -- -- -- -0.0959 15.3 -- -- -- --
19.5 0.206 9.82 -- -- -0.479 -- -- -0.112 -- 86 1196 -- --
24.99 0.233 9.82 -- -- -- -- -- -0.102 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 15.00 humidity 80 720 < th dose dependent rect. 18 5
57 15.90 humidity 80 720 < th dose dependent sin 12 NA
65 15.97 humidity 80 720 < th dose independent rect. 18 3
66 15.97 humidity 80 14400 < th dose dependent rect. 6 1
68 15.99 humidity 80 14400 < th dose independent rect. 6 1
73 16.04 humidity 50 1440 < th dose independent rect. 16 1
77 16.05 humidity 50 1440 < th dose dependent rect. 16 1
84 16.10 temperature 25 270 < th dose independent rect. 1 4
94 16.18 humidity 80 14400 > th dose independent rect. 5 2
96 16.20 temperature 25 270 < th dose independent rect. 23 6
104 16.24 temperature 30 720 > th dose dependent rect. 18 1
126 16.31 humidity 70 720 > th dose independent sin 12 NA
127 16.31 humidity 50 1440 > th dose independent rect. 16 1
129 16.33 humidity 70 720 > th dose independent rect. 15 17
134 16.34 humidity 50 720 > th dose dependent rect. 17 8
136 16.36 temperature 25 90 < th dose independent rect. 3 4
139 16.37 humidity 80 14400 < th dose independent rect. 4 4
151 16.38 humidity 70 720 < th dose independent sin 13 NA
178 16.42 wind 3 43200 < th dose independent rect. 2 1
184 16.43 wind 3 43200 > th dose independent rect. 2 1
197 16.43 radiation 1 720 > th dose dependent rect. 18 1
224 16.46 humidity 80 14400 < th dose independent rect. 22 10
238 16.50 humidity 80 14400 < th dose dependent rect. 1 7
240 16.51 humidity 60 720 < th dose independent rect. 18 2
281 16.54 wind 1 90 < th dose independent rect. 3 2
299 16.59 radiation 1 720 > th dose independent rect. 18 1
351 16.63 humidity 50 720 > th dose dependent rect. 15 18
364 16.64 humidity 70 720 > th dose independent rect. 16 9
372 16.65 humidity 80 14400 > th dose independent rect. 23 8
378 16.67 humidity 80 720 > th dose independent rect. 12 21
418 16.70 humidity 50 4320 < th dose dependent rect. 15 21
420 16.71 humidity 80 14400 < th dose independent rect. 23 1
424 16.71 humidity 80 720 < th dose independent rect. 12 10
426 16.71 humidity 80 720 < th dose independent rect. 10 12
428 16.71 humidity 50 4320 < th dose independent rect. 14 22
435 16.72 humidity 80 720 < th dose independent rect. 8 14
440 16.72 humidity 90 90 > th dose dependent rect. 4 1
442 16.73 humidity 50 4320 < th dose independent sin 10 NA
464 16.74 humidity 50 4320 < th dose independent rect. 10 7
495 16.75 humidity 50 4320 < th dose independent sin 18 NA
498 16.75 humidity 50 4320 < th dose independent no NA NA
675 16.76 humidity 90 10 > th dose independent rect. 4 2
676 16.76 humidity 80 14400 < th dose independent rect. 22 3
696 16.76 wind 1 90 < th dose dependent rect. 4 1
719 16.78 humidity 50 4320 < th dose dependent sin 11 NA
720 16.78 wind 3 90 < th dose dependent rect. 3 4
736 16.79 wind 3 10 < th dose dependent rect. 3 4
747 16.80 humidity 80 1440 < th dose independent rect. 7 8
820 16.82 humidity 90 90 > th dose dependent rect. 3 3
837 16.83 humidity 80 720 > th dose independent rect. 23 23
860 16.84 humidity 80 720 > th dose independent rect. 17 22
861 16.84 humidity 80 720 > th dose independent rect. 4 23
880 16.85 humidity 80 1440 < th dose independent sin 2 NA
882 16.85 wind 3 43200 > th dose independent rect. 23 5
926 16.86 humidity 80 1440 > th dose independent rect. 7 8
931 16.86 humidity 80 1440 > th dose independent rect. 7 15
939 16.86 humidity 80 14400 < th dose dependent rect. 22 1
940 16.86 humidity 90 10 > th dose dependent rect. 4 2
963 16.87 humidity 80 720 > th dose independent rect. 6 23
977 16.88 humidity 80 1440 > th dose independent sin 1 NA
979 16.88 humidity 80 720 > th dose independent no NA NA
998 16.88 humidity 80 720 < th dose independent rect. 16 22