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Os08g0127800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.3 (0.0311) R2 : 0.384
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.21 (0.0743) R2dC : 0.358 R2C : 0.353
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.274 (0.0654) R2dN8 : 0.0308 R2N8 : 0.0265
σ : 0.586
deviance : 156.84
__
_____
C
peak time of C : 12.9
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
106.14 0.484 10.3 0.715 0.316 -1.21 1.98 0.891 -0.219 19.6 18.78 10 -- --
108.41 0.485 10.3 0.84 0.33 -1.24 2.22 -- -0.18 20.4 18.78 9 -- --
113.37 0.496 10.3 0.706 0.327 -1.07 -- 1.64 -0.202 17.3 17.97 9 -- --
127.69 0.526 10.3 0.645 0.34 -0.997 -- -- -0.212 16.2 19.24 9 -- --
118.96 0.508 10.3 0.686 -- -1.12 -- 1.61 -0.218 -- 18.64 9 -- --
135.56 0.546 10.3 0.727 1.21 -- -1.54 -- -0.195 12.6 -- -- -- --
144.97 0.564 10.3 0.671 1.22 -- -- -- -0.2 12.9 -- -- -- --
132.95 0.537 10.3 0.63 -- -1.11 -- -- -0.221 -- 20 9 -- --
138.66 0.548 10.4 -- 0.348 -0.964 -- -- -0.279 15.9 19.45 9 -- --
237.44 0.72 10.3 0.626 -- -- -- -- -0.223 -- -- -- -- --
156.84 0.586 10.3 -- 1.21 -- -- -- -0.274 12.9 -- -- -- --
143.44 0.558 10.4 -- -- -1.12 -- -- -0.291 -- 20 9 -- --
247.77 0.735 10.4 -- -- -- -- -- -0.292 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 92.48 radiation 10.0 270 < th dose independent rect. 24 6
2 92.49 radiation 10.0 270 < th dose dependent rect. 24 7
3 92.75 precipitation 0.1 270 < th dose independent rect. 24 6
4 92.75 humidity 50.0 270 > th dose dependent rect. 24 6
5 92.75 precipitation 0.1 270 < th dose dependent rect. 24 6
10 92.91 wind 7.0 270 < th dose independent rect. 24 6
12 92.99 temperature 10.0 270 > th dose independent rect. 24 6
13 92.99 temperature 30.0 270 < th dose independent rect. 24 6
14 92.99 humidity 50.0 270 > th dose independent rect. 24 6
17 92.99 atmosphere 995.0 270 > th dose independent rect. 24 6
18 92.99 atmosphere 1015.0 270 < th dose independent rect. 24 6
22 92.99 temperature 10.0 270 > th dose independent rect. 6 18
28 93.47 wind 9.0 270 < th dose independent rect. 6 18
30 93.71 precipitation 0.1 270 < th dose independent rect. 6 18
31 93.71 precipitation 0.1 270 < th dose dependent rect. 6 18
33 93.79 radiation 1.0 270 < th dose dependent rect. 1 17
35 93.92 radiation 1.0 270 < th dose independent rect. 24 18
36 93.96 humidity 50.0 270 > th dose dependent rect. 1 4
38 94.01 precipitation 0.1 270 < th dose independent rect. 1 4
39 94.01 precipitation 0.1 270 < th dose dependent rect. 1 4
40 94.02 radiation 1.0 270 < th dose dependent rect. 1 4
54 94.20 wind 7.0 270 < th dose independent rect. 1 4
56 94.21 temperature 10.0 270 > th dose independent rect. 1 4
58 94.21 temperature 30.0 270 < th dose independent rect. 1 4
59 94.21 humidity 50.0 270 > th dose independent rect. 1 4
62 94.21 atmosphere 995.0 270 > th dose independent rect. 1 4
63 94.21 atmosphere 1010.0 270 < th dose independent rect. 1 4
68 94.21 temperature 10.0 270 > th dose independent rect. 5 20
69 94.24 wind 9.0 270 < th dose dependent rect. 24 6
84 94.67 wind 9.0 270 < th dose independent rect. 5 20
94 94.88 humidity 70.0 90 > th dose dependent rect. 1 8
113 95.17 precipitation 0.1 270 < th dose independent rect. 5 20
114 95.17 precipitation 0.1 270 < th dose dependent rect. 5 20
158 95.50 wind 9.0 270 < th dose dependent rect. 1 4
162 95.52 humidity 70.0 10 > th dose dependent rect. 2 6
203 95.71 temperature 10.0 270 > th dose dependent rect. 24 6
235 96.06 humidity 50.0 270 > th dose independent rect. 5 8
240 96.10 humidity 50.0 270 > th dose independent rect. 6 18
270 96.31 wind 9.0 10 < th dose dependent rect. 2 5
277 96.34 temperature 10.0 270 > th dose independent rect. 5 8
278 96.34 atmosphere 995.0 270 > th dose independent rect. 5 8
279 96.34 atmosphere 1015.0 270 < th dose independent rect. 5 8
281 96.34 temperature 10.0 270 > th dose independent rect. 13 16
332 96.46 radiation 10.0 90 < th dose dependent sin 3 NA
334 96.47 wind 1.0 270 > th dose independent rect. 1 3
337 96.49 precipitation 0.1 270 < th dose independent rect. 5 8
338 96.49 precipitation 0.1 270 < th dose dependent rect. 5 8
339 96.50 radiation 1.0 10 > th dose independent rect. 7 9
359 96.67 temperature 15.0 10 > th dose independent rect. 7 19
374 96.81 wind 1.0 270 > th dose independent rect. 6 18
378 96.84 precipitation 0.1 270 < th dose independent rect. 13 16
379 96.84 precipitation 0.1 270 < th dose dependent rect. 13 16
386 96.88 radiation 20.0 10 < th dose independent rect. 2 6
394 96.91 wind 9.0 270 < th dose independent rect. 13 16
412 96.95 atmosphere 995.0 270 > th dose independent rect. 13 16
420 97.07 wind 9.0 270 < th dose independent rect. 5 8
427 97.11 atmosphere 1015.0 270 < th dose independent rect. 6 18
429 97.14 atmosphere 995.0 270 > th dose independent rect. 6 18
465 97.25 radiation 30.0 10 < th dose dependent rect. 2 7
469 97.30 precipitation 0.1 10 < th dose independent rect. 2 5
471 97.30 precipitation 0.1 10 < th dose dependent rect. 2 5
477 97.33 wind 7.0 10 < th dose independent rect. 2 5
498 97.60 temperature 10.0 10 > th dose independent rect. 2 5
500 97.60 temperature 30.0 10 < th dose independent rect. 2 5
501 97.60 humidity 50.0 10 > th dose independent rect. 2 5
504 97.60 atmosphere 995.0 10 > th dose independent rect. 2 5
505 97.60 atmosphere 1015.0 10 < th dose independent rect. 2 5
522 97.65 precipitation 0.1 10 < th dose independent rect. 7 19
524 97.65 precipitation 0.1 10 < th dose dependent rect. 7 19
525 97.66 wind 1.0 270 > th dose independent rect. 24 6
546 97.81 radiation 40.0 30 < th dose dependent rect. 13 18
555 97.92 radiation 30.0 10 < th dose dependent rect. 2 9
588 98.15 atmosphere 995.0 10 > th dose independent rect. 16 15
590 98.16 radiation 10.0 10 < th dose independent rect. 2 12
631 98.43 wind 9.0 10 < th dose independent rect. 7 19
642 98.48 radiation 20.0 10 < th dose dependent rect. 2 12
646 98.50 atmosphere 995.0 270 > th dose dependent rect. 24 6
674 98.59 wind 9.0 1440 < th dose independent rect. 3 5
675 98.59 temperature 10.0 1440 > th dose independent rect. 3 5
678 98.59 temperature 30.0 1440 < th dose independent rect. 3 5
682 98.59 humidity 50.0 1440 > th dose independent rect. 3 5
687 98.59 atmosphere 995.0 1440 > th dose independent rect. 3 5
689 98.59 temperature 10.0 1440 > th dose independent rect. 8 19
709 98.70 temperature 10.0 270 > th dose dependent rect. 2 2
735 98.86 radiation 1.0 270 < th dose independent sin 4 NA
756 98.96 radiation 1.0 270 > th dose independent sin 5 NA
773 99.05 radiation 40.0 270 < th dose independent rect. 14 15
777 99.06 wind 1.0 270 > th dose independent rect. 5 20
809 99.20 atmosphere 995.0 270 > th dose dependent rect. 1 4
817 99.23 radiation 40.0 90 < th dose dependent rect. 15 16
826 99.27 atmosphere 995.0 270 > th dose independent rect. 5 20
858 99.43 temperature 10.0 10 > th dose dependent rect. 2 5
888 99.51 precipitation 0.1 10 < th dose independent rect. 7 9
891 99.51 precipitation 0.1 10 < th dose dependent rect. 7 9
899 99.56 radiation 30.0 10 < th dose independent rect. 16 15
901 99.57 temperature 10.0 10 > th dose independent rect. 7 9
903 99.57 atmosphere 1015.0 10 < th dose independent rect. 7 9
904 99.57 temperature 10.0 10 > th dose independent rect. 16 15