Os08g0122400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os08g0122400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 108.44 | 0.489 | 3.4 | 0.082 | 0.241 | 0.685 | -0.653 | 1.7 | -0.00725 | 6.01 | 24 | 900 | -- | -- |
| 112.03 | 0.493 | 3.37 | 0.35 | 0.257 | 0.497 | -0.645 | -- | 0.056 | 5.79 | 24.89 | 1007 | -- | -- |
| 109.29 | 0.487 | 3.41 | 0.12 | 0.252 | 0.851 | -- | 2 | -0.0131 | 6.44 | 22.39 | 1029 | -- | -- |
| 112.76 | 0.495 | 3.37 | 0.348 | 0.26 | 0.472 | -- | -- | 0.0513 | 6.48 | 24.61 | 1011 | -- | -- |
| 112.44 | 0.494 | 3.41 | 0.128 | -- | 0.842 | -- | 1.95 | -0.00604 | -- | 22.46 | 908 | -- | -- |
| 115.53 | 0.504 | 3.39 | 0.213 | 0.264 | -- | -0.43 | -- | -0.0487 | 6.56 | -- | -- | -- | -- |
| 115.82 | 0.504 | 3.39 | 0.208 | 0.266 | -- | -- | -- | -0.0465 | 7.33 | -- | -- | -- | -- |
| 114.7 | 0.499 | 3.37 | 0.356 | -- | 0.536 | -- | -- | 0.0659 | -- | 29.3 | 642 | -- | -- |
| 115.45 | 0.5 | 3.38 | -- | 0.262 | 0.315 | -- | -- | -0.0156 | 6.66 | 24.6 | 1017 | -- | -- |
| 119.56 | 0.511 | 3.39 | 0.213 | -- | -- | -- | -- | -0.0421 | -- | -- | -- | -- | -- |
| 116.96 | 0.506 | 3.39 | -- | 0.268 | -- | -- | -- | -0.0697 | 7.28 | -- | -- | -- | -- |
| 117.69 | 0.505 | 3.38 | -- | -- | 0.404 | -- | -- | 0.00335 | -- | 29.5 | 608 | -- | -- |
| 120.76 | 0.513 | 3.4 | -- | -- | -- | -- | -- | -0.0657 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 103.17 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 2 | 103.42 | atmosphere | 1005.0 | 90 | > th | dose dependent | rect. | 2 | 1 |
| 3 | 103.75 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 4 | 103.77 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 2 | 2 |
| 5 | 104.01 | humidity | 80.0 | 10 | < th | dose independent | rect. | 2 | 6 |
| 11 | 104.37 | humidity | 80.0 | 10 | < th | dose independent | rect. | 24 | 8 |
| 13 | 104.47 | temperature | 25.0 | 90 | > th | dose independent | rect. | 1 | 1 |
| 21 | 104.61 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 1 | 2 |
| 31 | 104.65 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 32 | 104.65 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 35 | 104.65 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 39 | 104.65 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 48 | 104.65 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 49 | 104.65 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 69 | 104.65 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 81 | 104.77 | wind | 3.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 83 | 104.78 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 88 | 104.79 | wind | 5.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 96 | 104.82 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 98 | 104.82 | temperature | 30.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 99 | 104.82 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 103 | 104.82 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 105 | 104.82 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 110 | 104.82 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 111 | 104.82 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 113 | 104.82 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 116 | 104.82 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 121 | 104.82 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 122 | 104.83 | humidity | 90.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 126 | 104.90 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 129 | 104.96 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 132 | 104.96 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 138 | 105.11 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 23 |
| 140 | 105.11 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 199 | 106.16 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 211 | 106.74 | humidity | 50.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 214 | 106.98 | radiation | 10.0 | 30 | > th | dose independent | rect. | 7 | 1 |
| 218 | 107.04 | humidity | 90.0 | 90 | < th | dose independent | rect. | 2 | 1 |
| 226 | 107.41 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 20 | 8 |
| 231 | 107.67 | wind | 5.0 | 4320 | > th | dose independent | sin | 12 | NA |
| 239 | 107.98 | wind | 5.0 | 4320 | < th | dose independent | sin | 12 | NA |
| 243 | 108.06 | wind | 5.0 | 4320 | > th | dose dependent | sin | 12 | NA |
| 245 | 108.07 | temperature | 20.0 | 720 | > th | dose independent | rect. | 3 | 19 |
| 271 | 108.14 | temperature | 20.0 | 720 | > th | dose independent | rect. | 3 | 17 |
| 277 | 108.24 | humidity | 90.0 | 90 | < th | dose independent | rect. | 1 | 4 |
| 295 | 108.37 | radiation | 10.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 303 | 108.44 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 304 | 108.49 | wind | 7.0 | 4320 | < th | dose independent | rect. | 20 | 8 |
| 309 | 108.62 | wind | 5.0 | 4320 | > th | dose independent | rect. | 16 | 15 |
| 311 | 108.62 | temperature | 20.0 | 720 | < th | dose independent | rect. | 4 | 17 |
| 313 | 108.64 | wind | 7.0 | 4320 | > th | dose independent | rect. | 20 | 8 |
| 314 | 108.66 | temperature | 20.0 | 720 | < th | dose independent | rect. | 5 | 15 |
| 315 | 108.67 | temperature | 20.0 | 720 | > th | dose independent | sin | 0 | NA |
| 319 | 108.70 | wind | 7.0 | 4320 | < th | dose independent | rect. | 19 | 10 |
| 325 | 108.73 | temperature | 25.0 | 30 | > th | dose independent | rect. | 7 | 1 |
| 328 | 108.73 | humidity | 90.0 | 90 | < th | dose independent | rect. | 1 | 20 |
| 332 | 108.74 | radiation | 10.0 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 334 | 108.76 | temperature | 20.0 | 720 | < th | dose independent | sin | 23 | NA |
| 340 | 108.79 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 19 | 15 |
| 347 | 108.83 | wind | 7.0 | 4320 | > th | dose independent | rect. | 19 | 10 |
| 352 | 108.85 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 22 | 22 |
| 362 | 108.89 | radiation | 10.0 | 10 | > th | dose independent | rect. | 16 | 16 |
| 363 | 108.89 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 12 | 11 |
| 367 | 108.90 | wind | 5.0 | 4320 | < th | dose independent | rect. | 16 | 15 |
| 373 | 108.91 | wind | 1.0 | 43200 | > th | dose independent | rect. | 4 | 3 |
| 374 | 108.91 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 19 | 1 |
| 376 | 108.92 | wind | 7.0 | 4320 | < th | dose independent | rect. | 19 | 15 |
| 382 | 108.94 | wind | 7.0 | 4320 | > th | dose independent | rect. | 19 | 15 |
| 394 | 108.97 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 1 | 7 |
| 398 | 108.98 | wind | 5.0 | 4320 | < th | dose independent | rect. | 16 | 13 |
| 401 | 108.99 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 2 | 5 |
| 405 | 109.00 | wind | 5.0 | 4320 | < th | dose independent | rect. | 14 | 18 |
| 414 | 109.01 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 12 | 21 |
| 419 | 109.02 | temperature | 25.0 | 720 | < th | dose dependent | sin | 10 | NA |
| 427 | 109.02 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 430 | 109.03 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 22 | 8 |
| 444 | 109.05 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 19 | 22 |
| 450 | 109.06 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 16 | 16 |
| 478 | 109.09 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 18 | 14 |
| 511 | 109.12 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 15 | 23 |
| 516 | 109.13 | temperature | 25.0 | 720 | < th | dose dependent | no | NA | NA |
| 539 | 109.16 | humidity | 90.0 | 720 | < th | dose independent | rect. | 1 | 4 |
| 550 | 109.17 | wind | 5.0 | 4320 | > th | dose independent | rect. | 20 | 4 |
| 615 | 109.24 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 12 | 1 |
| 657 | 109.29 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 4 | 23 |
| 658 | 109.30 | wind | 1.0 | 43200 | < th | dose independent | rect. | 4 | 4 |
| 690 | 109.34 | wind | 5.0 | 4320 | < th | dose independent | rect. | 20 | 4 |
| 694 | 109.34 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 23 | 4 |
| 711 | 109.36 | temperature | 25.0 | 1440 | < th | dose dependent | sin | 19 | NA |
| 761 | 109.43 | humidity | 90.0 | 720 | < th | dose independent | rect. | 24 | 7 |
| 769 | 109.44 | temperature | 20.0 | 720 | > th | dose independent | rect. | 12 | 21 |
| 779 | 109.45 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 811 | 109.49 | temperature | 20.0 | 720 | < th | dose independent | rect. | 3 | 6 |
| 836 | 109.52 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 24 | 1 |
| 847 | 109.53 | temperature | 20.0 | 720 | > th | dose independent | rect. | 7 | 23 |
| 864 | 109.55 | humidity | 90.0 | 90 | < th | dose independent | rect. | 1 | 16 |
| 882 | 109.57 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 4 |
| 890 | 109.58 | temperature | 20.0 | 720 | > th | dose independent | rect. | 7 | 8 |
| 982 | 109.66 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 8 |