Os08g0121800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ribosomal protein S21 family protein.
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Os08g0121800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Ribosomal protein S21 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 49.36 | 0.33 | 7.5 | 0.775 | 0.773 | 0.253 | 0.263 | 1.15 | 0.594 | 23 | 70 | 1289 | -- | -- |
| 51.16 | 0.333 | 7.47 | 0.924 | 0.733 | 0.417 | 0.102 | -- | 0.635 | 22.9 | 69.27 | 2945 | -- | -- |
| 49.6 | 0.328 | 7.49 | 0.779 | 0.758 | 0.256 | -- | 1.07 | 0.596 | 23 | 70.05 | 1335 | -- | -- |
| 51.11 | 0.333 | 7.48 | 0.912 | 0.725 | 0.457 | -- | -- | 0.639 | 22.6 | 69.8 | 3167 | -- | -- |
| 75.56 | 0.407 | 7.46 | 0.921 | -- | 0.379 | -- | -0.215 | 0.598 | -- | 69 | 3084 | -- | -- |
| 55.89 | 0.35 | 7.48 | 0.88 | 0.722 | -- | 0.094 | -- | 0.603 | 22.8 | -- | -- | -- | -- |
| 55.92 | 0.35 | 7.48 | 0.876 | 0.721 | -- | -- | -- | 0.603 | 22.8 | -- | -- | -- | -- |
| 75.78 | 0.407 | 7.47 | 0.918 | -- | 0.377 | -- | -- | 0.597 | -- | 69.8 | 3167 | -- | -- |
| 54.65 | 0.344 | 7.52 | -- | 0.719 | 0.892 | -- | -- | 0.454 | 22.9 | 63.88 | 47520 | -- | -- |
| 88.18 | 0.439 | 7.46 | 0.891 | -- | -- | -- | -- | 0.607 | -- | -- | -- | -- | -- |
| 76.15 | 0.408 | 7.5 | -- | 0.729 | -- | -- | -- | 0.505 | 22.9 | -- | -- | -- | -- |
| 86.75 | 0.434 | 7.5 | -- | -- | 0.91 | -- | -- | 0.456 | -- | 63.45 | 47520 | -- | -- |
| 109.13 | 0.488 | 7.49 | -- | -- | -- | -- | -- | 0.509 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 45.49 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 4 | 2 |
| 2 | 45.82 | wind | 1.0 | 43200 | > th | dose independent | rect. | 4 | 3 |
| 3 | 46.35 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 5 | 46.43 | wind | 1.0 | 43200 | > th | dose independent | rect. | 23 | 7 |
| 8 | 46.56 | wind | 1.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 9 | 46.58 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 10 | 46.58 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 11 | 46.65 | wind | 1.0 | 43200 | < th | dose independent | rect. | 4 | 3 |
| 12 | 46.70 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 16 | 46.87 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 23 | 7 |
| 17 | 46.96 | wind | 1.0 | 43200 | < th | dose independent | rect. | 23 | 7 |
| 18 | 46.96 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 20 | 47.01 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 27 | 47.22 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 32 | 47.31 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 34 | 47.32 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 12 |
| 43 | 47.44 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 53 | 47.54 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 12 |
| 54 | 47.54 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 12 |
| 58 | 47.56 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 10 | 3 |
| 61 | 47.58 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 9 | 4 |
| 67 | 47.63 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 12 |
| 77 | 47.68 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 81 | 47.76 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 7 | 7 |
| 91 | 47.80 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 98 | 47.83 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 2 | 11 |
| 106 | 47.87 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 23 | 7 |
| 113 | 47.91 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 115 | 47.91 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 10 | 3 |
| 124 | 47.94 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 7 |
| 133 | 47.97 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 7 |
| 134 | 47.97 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 7 |
| 145 | 48.01 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 147 | 48.01 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 2 |
| 153 | 48.04 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 159 | 48.04 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 2 |
| 172 | 48.08 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 6 | 6 |
| 183 | 48.11 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 8 |
| 185 | 48.12 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 6 | 6 |
| 199 | 48.15 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 6 | 8 |
| 204 | 48.16 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 3 | 10 |
| 215 | 48.17 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 20 | 17 |
| 240 | 48.20 | temperature | 20.0 | 270 | > th | dose independent | rect. | 15 | 10 |
| 241 | 48.20 | radiation | 10.0 | 90 | < th | dose independent | rect. | 6 | 22 |
| 248 | 48.22 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 1 | 13 |
| 255 | 48.24 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 7 |
| 259 | 48.25 | wind | 1.0 | 43200 | > th | dose independent | rect. | 2 | 11 |
| 273 | 48.28 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 9 |
| 297 | 48.31 | wind | 1.0 | 43200 | < th | dose independent | rect. | 2 | 11 |
| 303 | 48.32 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 9 |
| 306 | 48.32 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 9 |
| 356 | 48.40 | humidity | 90.0 | 4320 | > th | dose independent | rect. | 13 | 1 |
| 360 | 48.40 | humidity | 60.0 | 1440 | > th | dose dependent | sin | 4 | NA |
| 377 | 48.43 | humidity | 70.0 | 1440 | > th | dose independent | sin | 5 | NA |
| 398 | 48.46 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 23 | 14 |
| 440 | 48.49 | wind | 1.0 | 43200 | > th | dose independent | sin | 9 | NA |
| 512 | 48.56 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 6 | 22 |
| 550 | 48.61 | wind | 1.0 | 43200 | < th | dose independent | sin | 9 | NA |
| 552 | 48.61 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 12 | 4 |
| 555 | 48.62 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 577 | 48.64 | humidity | 90.0 | 1440 | < th | dose dependent | sin | 6 | NA |
| 581 | 48.65 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 5 |
| 597 | 48.66 | humidity | 70.0 | 1440 | < th | dose independent | sin | 4 | NA |
| 621 | 48.68 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 622 | 48.68 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 12 | 4 |
| 627 | 48.68 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 12 | 4 |
| 686 | 48.73 | temperature | 20.0 | 10 | > th | dose independent | rect. | 6 | 22 |
| 789 | 48.83 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 3 |
| 792 | 48.83 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 3 |
| 803 | 48.84 | wind | 1.0 | 43200 | > th | dose independent | rect. | 16 | 14 |
| 830 | 48.87 | wind | 9.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 849 | 48.89 | wind | 1.0 | 43200 | < th | dose independent | rect. | 16 | 14 |
| 865 | 48.90 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 5 | 7 |
| 979 | 48.99 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 6 |
| 989 | 48.99 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 6 |
| 998 | 49.00 | wind | 9.0 | 14400 | > th | dose independent | rect. | 7 | 4 |