Os08g0100800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Homeodomain-like containing protein.
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Os08g0100800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Homeodomain-like containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 22.67 | 0.224 | 12 | -1.17 | 0.143 | 0.848 | 0.168 | -1.05 | -0.456 | 17.8 | 21.39 | 1414 | -- | -- |
| 22.71 | 0.222 | 12 | -0.981 | 0.118 | 0.808 | 0.0642 | -- | -0.465 | 18.8 | 21.01 | 7467 | -- | -- |
| 22.73 | 0.222 | 12 | -1.18 | 0.14 | 0.845 | -- | -1.08 | -0.457 | 18.2 | 21.48 | 1430 | -- | -- |
| 22.72 | 0.222 | 12 | -0.972 | 0.12 | 0.802 | -- | -- | -0.46 | 19 | 21.15 | 7435 | -- | -- |
| 23.14 | 0.224 | 12 | -1.21 | -- | 0.895 | -- | -1.23 | -0.462 | -- | 21.8 | 1762 | -- | -- |
| 44.29 | 0.312 | 12 | -0.565 | 0.12 | -- | 0.00215 | -- | -0.183 | 19.9 | -- | -- | -- | -- |
| 44.29 | 0.312 | 12 | -0.565 | 0.12 | -- | -- | -- | -0.183 | 19.9 | -- | -- | -- | -- |
| 23.32 | 0.225 | 12 | -0.976 | -- | 0.819 | -- | -- | -0.466 | -- | 21.02 | 7704 | -- | -- |
| 40.84 | 0.298 | 12 | -- | 0.11 | 0.546 | -- | -- | -0.22 | 19.5 | 21.9 | 1481 | -- | -- |
| 45.07 | 0.314 | 12 | -0.567 | -- | -- | -- | -- | -0.184 | -- | -- | -- | -- | -- |
| 52.71 | 0.34 | 12 | -- | 0.124 | -- | -- | -- | -0.12 | 19.5 | -- | -- | -- | -- |
| 40.62 | 0.297 | 12 | -- | -- | 0.548 | -- | -- | -0.241 | -- | 27.8 | 7683 | -- | -- |
| 53.54 | 0.342 | 12 | -- | -- | -- | -- | -- | -0.122 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 22.64 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 19 |
| 45 | 22.85 | temperature | 20 | 1440 | > th | dose dependent | sin | 2 | NA |
| 56 | 22.87 | temperature | 20 | 1440 | > th | dose dependent | rect. | 14 | 22 |
| 70 | 22.90 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 73 | 22.90 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 23 |
| 85 | 22.92 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 89 | 22.93 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 11 |
| 92 | 22.93 | temperature | 20 | 1440 | > th | dose dependent | rect. | 8 | 23 |
| 98 | 22.94 | temperature | 20 | 1440 | > th | dose dependent | rect. | 10 | 23 |
| 99 | 22.94 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 23 |
| 201 | 23.16 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 7 |
| 313 | 23.54 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 1 |
| 400 | 23.76 | temperature | 20 | 1440 | > th | dose dependent | rect. | 10 | 3 |
| 646 | 23.99 | temperature | 25 | 1440 | > th | dose independent | rect. | 16 | 6 |
| 727 | 24.04 | temperature | 25 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 782 | 24.07 | wind | 3 | 43200 | > th | dose dependent | rect. | 20 | 1 |