Os07g0694800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF155 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os07g0694800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF155 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 28.95 | 0.253 | 12.5 | -0.54 | 0.348 | 0.398 | 0.247 | 0.0261 | -0.31 | 16.5 | 26.7 | 62 | -- | -- |
| 28.94 | 0.251 | 12.5 | -0.543 | 0.352 | 0.396 | 0.257 | -- | -0.312 | 16.5 | 26.7 | 58 | -- | -- |
| 29.04 | 0.251 | 12.5 | -0.519 | 0.348 | 0.402 | -- | 0.128 | -0.307 | 16.8 | 26.66 | 57 | -- | -- |
| 29.08 | 0.251 | 12.5 | -0.545 | 0.345 | 0.408 | -- | -- | -0.315 | 16.8 | 26.6 | 57 | -- | -- |
| 33.15 | 0.268 | 12.5 | -0.592 | -- | 0.567 | -- | 0.0858 | -0.367 | -- | 26.5 | 73 | -- | -- |
| 37.62 | 0.288 | 12.5 | -0.433 | 0.639 | -- | 0.512 | -- | -0.218 | 15.8 | -- | -- | -- | -- |
| 38.37 | 0.29 | 12.5 | -0.426 | 0.644 | -- | -- | -- | -0.215 | 16 | -- | -- | -- | -- |
| 33.16 | 0.268 | 12.5 | -0.606 | -- | 0.566 | -- | -- | -0.368 | -- | 26.54 | 70 | -- | -- |
| 36.16 | 0.282 | 12.5 | -- | 0.434 | 0.335 | -- | -- | -0.213 | 16.6 | 27 | 45 | -- | -- |
| 61.07 | 0.365 | 12.5 | -0.453 | -- | -- | -- | -- | -0.232 | -- | -- | -- | -- | -- |
| 43.16 | 0.307 | 12.5 | -- | 0.653 | -- | -- | -- | -0.167 | 16 | -- | -- | -- | -- |
| 42.63 | 0.304 | 12.5 | -- | -- | 0.517 | -- | -- | -0.291 | -- | 26.55 | 69 | -- | -- |
| 66.47 | 0.381 | 12.5 | -- | -- | -- | -- | -- | -0.182 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 24.92 | temperature | 25 | 10 | > th | dose dependent | sin | 4 | NA |
| 13 | 25.82 | temperature | 20 | 270 | > th | dose dependent | rect. | 5 | 6 |
| 15 | 26.05 | temperature | 25 | 270 | < th | dose independent | rect. | 2 | 12 |
| 18 | 26.09 | temperature | 25 | 270 | > th | dose independent | rect. | 6 | 5 |
| 37 | 26.76 | temperature | 30 | 10 | < th | dose dependent | rect. | 4 | 12 |
| 54 | 27.06 | temperature | 25 | 90 | > th | dose independent | sin | 2 | NA |
| 71 | 27.27 | temperature | 25 | 270 | < th | dose independent | sin | 3 | NA |
| 83 | 27.31 | temperature | 30 | 30 | < th | dose dependent | sin | 1 | NA |
| 94 | 27.40 | temperature | 25 | 90 | > th | dose dependent | rect. | 1 | 10 |
| 119 | 27.53 | temperature | 25 | 90 | > th | dose dependent | rect. | 1 | 12 |
| 135 | 27.61 | temperature | 25 | 90 | > th | dose dependent | rect. | 23 | 12 |
| 153 | 27.68 | temperature | 20 | 90 | > th | dose dependent | rect. | 6 | 11 |
| 159 | 27.70 | temperature | 25 | 90 | > th | dose dependent | rect. | 23 | 14 |
| 174 | 27.79 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 10 |
| 189 | 27.85 | temperature | 25 | 10 | > th | dose dependent | rect. | 1 | 14 |
| 197 | 27.90 | temperature | 25 | 10 | > th | dose dependent | rect. | 3 | 12 |
| 202 | 27.91 | temperature | 25 | 10 | > th | dose dependent | rect. | 23 | 16 |
| 365 | 28.40 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 13 |
| 586 | 29.05 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 17 |
| 708 | 29.33 | temperature | 25 | 10 | > th | dose independent | rect. | 7 | 8 |
| 838 | 29.57 | temperature | 25 | 10 | > th | dose dependent | rect. | 23 | 21 |
| 852 | 29.59 | temperature | 25 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 858 | 29.60 | temperature | 25 | 10 | > th | dose dependent | rect. | 1 | 19 |
| 868 | 29.62 | temperature | 30 | 720 | < th | dose dependent | rect. | 2 | 9 |
| 908 | 29.69 | temperature | 25 | 10 | > th | dose dependent | rect. | 7 | 21 |
| 916 | 29.70 | temperature | 25 | 10 | > th | dose dependent | rect. | 1 | 23 |