Os07g0692200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF588 family protein.
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Os07g0692200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF588 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 152.17 | 0.58 | 4.75 | 0.876 | 0.264 | 1.46 | 0.88 | -0.222 | 0.0609 | 9.02 | 22.3 | 1986 | -- | -- |
| 152.16 | 0.575 | 4.76 | 0.799 | 0.274 | 1.46 | 0.854 | -- | 0.0422 | 9.14 | 22.23 | 1946 | -- | -- |
| 154.43 | 0.579 | 4.76 | 0.866 | 0.272 | 1.45 | -- | -0.103 | 0.0436 | 10.1 | 22.3 | 1947 | -- | -- |
| 154.45 | 0.579 | 4.76 | 0.837 | 0.275 | 1.46 | -- | -- | 0.0438 | 10.1 | 22.3 | 1947 | -- | -- |
| 158.7 | 0.587 | 4.76 | 0.874 | -- | 1.48 | -- | -0.105 | 0.0614 | -- | 22.2 | 2000 | -- | -- |
| 230.66 | 0.712 | 4.87 | 0.219 | 0.351 | -- | 0.81 | -- | -0.468 | 9.34 | -- | -- | -- | -- |
| 232.76 | 0.714 | 4.87 | 0.251 | 0.348 | -- | -- | -- | -0.465 | 10.1 | -- | -- | -- | -- |
| 158.73 | 0.587 | 4.76 | 0.843 | -- | 1.48 | -- | -- | 0.054 | -- | 22.29 | 2000 | -- | -- |
| 169.95 | 0.607 | 4.79 | -- | 0.302 | 1.22 | -- | -- | -0.106 | 9.98 | 22.48 | 1871 | -- | -- |
| 240.1 | 0.724 | 4.88 | 0.247 | -- | -- | -- | -- | -0.465 | -- | -- | -- | -- | -- |
| 234.42 | 0.716 | 4.88 | -- | 0.347 | -- | -- | -- | -0.493 | 10.1 | -- | -- | -- | -- |
| 174.89 | 0.616 | 4.8 | -- | -- | 1.24 | -- | -- | -0.0953 | -- | 22.42 | 1962 | -- | -- |
| 241.71 | 0.726 | 4.89 | -- | -- | -- | -- | -- | -0.493 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 152.62 | temperature | 25 | 720 | < th | dose dependent | rect. | 15 | 16 |
| 2 | 152.64 | temperature | 25 | 720 | < th | dose dependent | rect. | 14 | 18 |
| 44 | 155.12 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 45 | 155.15 | temperature | 25 | 720 | < th | dose dependent | sin | 12 | NA |
| 54 | 155.34 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 14 |
| 72 | 155.79 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 78 | 155.95 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 23 |
| 85 | 156.11 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 100 | 156.50 | temperature | 10 | 720 | > th | dose dependent | sin | 11 | NA |
| 123 | 156.95 | temperature | 25 | 720 | < th | dose dependent | rect. | 24 | 23 |
| 141 | 157.11 | temperature | 25 | 1440 | < th | dose dependent | sin | 16 | NA |
| 190 | 157.72 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 5 |
| 236 | 158.39 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 4 |
| 242 | 158.46 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 12 |
| 266 | 158.76 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 273 | 158.85 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 7 |
| 312 | 159.26 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 7 |
| 364 | 159.74 | temperature | 15 | 720 | > th | dose dependent | rect. | 17 | 20 |
| 393 | 160.00 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 12 |
| 396 | 160.05 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 405 | 160.08 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 10 |
| 443 | 160.30 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 8 |
| 462 | 160.37 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 2 |
| 470 | 160.45 | temperature | 25 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 534 | 160.75 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 18 |
| 576 | 160.97 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 5 |
| 598 | 161.03 | temperature | 10 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 675 | 161.31 | temperature | 10 | 720 | > th | dose dependent | rect. | 8 | 23 |
| 744 | 161.52 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 866 | 161.95 | temperature | 10 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 924 | 162.11 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 19 |