Os07g0681000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Eukaryotic translation initiation factor 2 beta subunit (eIF-2-beta) (P38).
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Os07g0681000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Eukaryotic translation initiation factor 2 beta subunit (eIF-2-beta) (P38).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 54.76 | 0.348 | 11.1 | 0.164 | 0.758 | 1.13 | 0.145 | -0.283 | 0.308 | 15.9 | 20.7 | 1312 | -- | -- |
| 54.92 | 0.345 | 11.1 | 0.22 | 0.753 | 1.15 | 0.168 | -- | 0.322 | 15.9 | 20.7 | 1306 | -- | -- |
| 54.81 | 0.345 | 11.1 | 0.161 | 0.76 | 1.14 | -- | -0.29 | 0.305 | 15.9 | 20.7 | 1304 | -- | -- |
| 55 | 0.345 | 11.1 | 0.221 | 0.759 | 1.17 | -- | -- | 0.32 | 15.9 | 20.7 | 1304 | -- | -- |
| 82.41 | 0.423 | 11.1 | 0.0709 | -- | 1.13 | -- | -0.427 | 0.277 | -- | 20.8 | 1755 | -- | -- |
| 87.72 | 0.439 | 11.1 | 0.706 | 0.701 | -- | 0.397 | -- | 0.599 | 16.2 | -- | -- | -- | -- |
| 88.16 | 0.44 | 11.1 | 0.711 | 0.702 | -- | -- | -- | 0.601 | 16.1 | -- | -- | -- | -- |
| 82.79 | 0.424 | 11.1 | 0.162 | -- | 1.18 | -- | -- | 0.293 | -- | 20.8 | 1744 | -- | -- |
| 56.1 | 0.349 | 11.1 | -- | 0.75 | 1.26 | -- | -- | 0.282 | 15.9 | 20.7 | 1315 | -- | -- |
| 114.97 | 0.501 | 11.1 | 0.682 | -- | -- | -- | -- | 0.583 | -- | -- | -- | -- | -- |
| 101.47 | 0.471 | 11.1 | -- | 0.689 | -- | -- | -- | 0.522 | 16.1 | -- | -- | -- | -- |
| 83.35 | 0.425 | 11.1 | -- | -- | 1.24 | -- | -- | 0.262 | -- | 20.74 | 1755 | -- | -- |
| 127.25 | 0.527 | 11.1 | -- | -- | -- | -- | -- | 0.507 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 52.96 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 22 |
| 2 | 53.04 | temperature | 10 | 270 | > th | dose dependent | rect. | 5 | 22 |
| 3 | 53.12 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 6 |
| 4 | 53.19 | temperature | 20 | 4320 | < th | dose independent | rect. | 19 | 4 |
| 10 | 53.38 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 6 |
| 11 | 53.38 | temperature | 15 | 90 | > th | dose dependent | rect. | 8 | 20 |
| 72 | 54.66 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 22 |
| 83 | 54.80 | temperature | 15 | 10 | > th | dose dependent | rect. | 8 | 21 |
| 89 | 54.84 | temperature | 20 | 1440 | > th | dose independent | rect. | 17 | 14 |
| 103 | 54.93 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 23 |
| 114 | 54.99 | temperature | 20 | 4320 | < th | dose independent | sin | 16 | NA |
| 118 | 55.00 | temperature | 20 | 4320 | > th | dose independent | sin | 16 | NA |
| 135 | 55.12 | temperature | 20 | 1440 | > th | dose independent | sin | 10 | NA |
| 147 | 55.15 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 155 | 55.18 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 4 |
| 192 | 55.36 | temperature | 20 | 1440 | < th | dose independent | sin | 10 | NA |
| 212 | 55.46 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 218 | 55.47 | temperature | 30 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 225 | 55.51 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 228 | 55.52 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 250 | 55.60 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 14 |
| 272 | 55.67 | temperature | 25 | 1440 | < th | dose dependent | rect. | 18 | 8 |
| 379 | 55.90 | temperature | 30 | 90 | < th | dose dependent | rect. | 1 | 23 |
| 391 | 55.93 | temperature | 30 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 528 | 56.17 | temperature | 25 | 1440 | < th | dose dependent | sin | 12 | NA |
| 542 | 56.20 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 810 | 56.73 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 820 | 56.76 | temperature | 20 | 1440 | > th | dose independent | no | NA | NA |
| 821 | 56.76 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 972 | 57.06 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 23 |
| 975 | 57.08 | temperature | 20 | 1440 | < th | dose independent | no | NA | NA |
| 979 | 57.08 | temperature | 30 | 90 | < th | dose dependent | rect. | 17 | 23 |