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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os07g0674500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.87 (0.0116) R2 : 0.00391
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0325 (0.0243) R2dN8 : 0.00504 R2N8 : 0.00391
σ : 0.218
deviance : 21.76
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
21.15 0.216 2.85 0.215 0.0441 -0.213 0.000525 1.26 0.0672 15.7 26.63 193 -- --
21.46 0.216 2.86 0.102 0.0204 -0.0787 0.0866 -- 0.0587 15.6 19.55 325 -- --
21.14 0.214 2.85 0.232 0.0457 -0.235 -- 1.48 0.0672 16 27 243 -- --
21.46 0.216 2.87 0.0946 0.0329 -0.0967 -- -- 0.0419 15.9 26.6 191 -- --
21.21 0.214 2.85 0.218 -- -0.195 -- 1.43 0.0644 -- 27.2 248 -- --
21.56 0.218 2.87 0.0803 0.00278 -- -0.0768 -- 0.0411 2.92 -- -- -- --
21.58 0.218 2.87 0.082 0.00552 -- -- -- 0.0416 6.77 -- -- -- --
21.49 0.216 2.87 0.0888 -- -0.0653 -- -- 0.042 -- 26.6 196 -- --
21.68 0.217 2.87 -- 0.0184 -0.0669 -- -- 0.0333 15.8 26.6 190 -- --
21.58 0.217 2.87 0.0821 -- -- -- -- 0.0417 -- -- -- -- --
21.76 0.218 2.87 -- 0.00662 -- -- -- 0.0324 6.03 -- -- -- --
21.7 0.217 2.87 -- -- -0.0533 -- -- 0.0322 -- 26.6 160 -- --
21.76 0.218 2.87 -- -- -- -- -- 0.0325 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 18.16 temperature 10.0 1440 > th dose independent rect. 21 1
4 18.16 temperature 30.0 1440 < th dose independent rect. 21 1
8 18.16 humidity 50.0 1440 > th dose independent rect. 21 1
14 18.16 atmosphere 995.0 1440 > th dose independent rect. 21 1
15 18.16 radiation 1.0 1440 < th dose independent rect. 21 1
35 18.16 temperature 10.0 1440 > th dose independent rect. 22 23
38 18.16 radiation 40.0 4320 < th dose dependent rect. 21 1
45 18.19 temperature 25.0 30 > th dose independent rect. 20 1
48 18.20 atmosphere 1005.0 30 > th dose dependent rect. 20 1
51 18.22 wind 3.0 30 > th dose independent rect. 20 1
52 18.22 temperature 20.0 30 > th dose dependent rect. 20 1
54 18.23 humidity 80.0 30 > th dose independent rect. 20 1
59 18.25 humidity 90.0 30 < th dose independent rect. 20 1
62 18.26 atmosphere 1005.0 30 > th dose independent rect. 20 1
63 18.27 wind 5.0 30 < th dose independent rect. 20 1
68 18.28 temperature 10.0 30 > th dose independent rect. 20 1
70 18.28 temperature 30.0 30 < th dose independent rect. 20 1
71 18.28 humidity 50.0 30 > th dose independent rect. 20 1
74 18.28 atmosphere 995.0 30 > th dose independent rect. 20 1
76 18.28 atmosphere 1010.0 30 < th dose independent rect. 20 1
78 18.28 radiation 1.0 30 < th dose independent rect. 20 1
83 18.28 precipitation 0.1 30 < th dose independent rect. 20 1
84 18.28 temperature 10.0 30 > th dose independent rect. 21 23
85 18.28 wind 1.0 30 > th dose dependent rect. 20 1
86 18.28 radiation 1.0 30 < th dose dependent rect. 20 1
91 18.28 precipitation 0.1 30 < th dose dependent rect. 20 1
92 18.29 humidity 50.0 30 > th dose dependent rect. 20 1
94 18.30 wind 9.0 30 < th dose dependent rect. 20 1
99 18.36 wind 9.0 1440 < th dose independent rect. 21 1
102 18.41 humidity 90.0 30 < th dose dependent rect. 20 1
103 18.41 atmosphere 1015.0 30 < th dose dependent rect. 20 1
106 18.48 wind 9.0 30 < th dose independent rect. 21 23
108 18.53 temperature 30.0 30 < th dose dependent rect. 20 1
169 19.88 atmosphere 995.0 30 > th dose independent rect. 21 23
170 19.89 atmosphere 1005.0 10 > th dose dependent rect. 20 3
174 19.95 temperature 25.0 30 > th dose independent rect. 20 3
178 19.97 precipitation 0.1 30 < th dose independent rect. 21 23
179 19.97 precipitation 0.1 30 < th dose dependent rect. 21 23
189 20.07 humidity 90.0 10 < th dose independent rect. 20 3
195 20.13 wind 1.0 90 > th dose independent rect. 9 10
198 20.17 temperature 25.0 30 > th dose dependent rect. 6 1
202 20.21 atmosphere 1010.0 30 < th dose independent rect. 6 1
204 20.21 temperature 20.0 10 > th dose dependent rect. 20 3
212 20.24 radiation 10.0 30 < th dose independent rect. 6 1
213 20.25 atmosphere 1005.0 30 > th dose independent rect. 20 3
218 20.31 wind 1.0 10 < th dose dependent rect. 11 7
228 20.32 wind 1.0 10 < th dose dependent rect. 11 3
234 20.33 wind 1.0 10 < th dose independent rect. 11 7
251 20.35 wind 1.0 90 < th dose independent rect. 11 3
252 20.35 wind 1.0 10 < th dose independent rect. 11 4
259 20.35 wind 1.0 10 > th dose independent rect. 10 10
277 20.37 wind 3.0 10 > th dose independent rect. 20 3
296 20.38 wind 1.0 10 < th dose independent rect. 14 4
320 20.38 wind 1.0 10 < th dose dependent rect. 13 5
343 20.39 atmosphere 1010.0 30 < th dose dependent rect. 6 1
344 20.39 wind 1.0 10 < th dose dependent rect. 13 3
363 20.40 wind 1.0 10 < th dose independent rect. 13 1
383 20.40 wind 1.0 10 < th dose dependent rect. 13 1
567 20.49 humidity 50.0 30 > th dose independent rect. 21 23
568 20.49 atmosphere 1015.0 30 < th dose independent rect. 21 23
594 20.51 humidity 80.0 30 > th dose independent rect. 20 3
613 20.53 wind 9.0 1440 < th dose independent rect. 23 1
614 20.53 temperature 10.0 1440 > th dose independent rect. 23 1
617 20.53 temperature 30.0 1440 < th dose independent rect. 23 1
621 20.53 humidity 50.0 1440 > th dose independent rect. 23 1
631 20.53 humidity 90.0 30 < th dose independent rect. 22 1
632 20.53 atmosphere 1005.0 30 > th dose independent rect. 22 1
633 20.53 atmosphere 995.0 1440 > th dose independent rect. 23 1
634 20.53 radiation 1.0 1440 < th dose independent rect. 23 1
664 20.53 temperature 10.0 1440 > th dose independent rect. 24 23
667 20.53 wind 1.0 30 > th dose dependent rect. 6 1
669 20.53 atmosphere 1000.0 30 > th dose dependent rect. 22 1
671 20.53 radiation 1.0 1440 < th dose dependent rect. 23 1
678 20.54 wind 1.0 30 > th dose independent rect. 22 1
679 20.54 temperature 25.0 30 > th dose independent rect. 22 1
680 20.54 precipitation 0.1 30 < th dose independent rect. 22 1
682 20.54 wind 5.0 30 < th dose independent rect. 20 3
689 20.54 temperature 10.0 30 > th dose dependent rect. 22 1
693 20.54 humidity 90.0 30 < th dose dependent rect. 22 1
695 20.54 precipitation 0.1 30 < th dose dependent rect. 22 1
696 20.55 wind 3.0 30 < th dose independent rect. 22 1
700 20.55 temperature 10.0 30 > th dose independent rect. 22 1
703 20.55 temperature 30.0 30 < th dose independent rect. 22 1
704 20.55 humidity 50.0 30 > th dose independent rect. 22 1
707 20.55 atmosphere 995.0 30 > th dose independent rect. 22 1
709 20.55 atmosphere 1010.0 30 < th dose independent rect. 22 1
711 20.55 radiation 1.0 30 < th dose independent rect. 22 1
718 20.55 temperature 10.0 30 > th dose independent rect. 23 23
720 20.55 wind 7.0 30 < th dose dependent rect. 22 1
722 20.55 radiation 1.0 30 < th dose dependent rect. 22 1
735 20.56 humidity 50.0 30 > th dose dependent rect. 22 1
750 20.58 wind 1.0 30 > th dose dependent rect. 22 1
755 20.59 atmosphere 1015.0 30 < th dose dependent rect. 22 1
760 20.60 wind 1.0 10 < th dose independent sin 21 NA
774 20.61 humidity 90.0 30 < th dose dependent rect. 6 1
783 20.62 temperature 30.0 30 < th dose dependent rect. 22 1
795 20.63 temperature 25.0 30 > th dose dependent rect. 20 11
809 20.64 radiation 10.0 10 < th dose dependent rect. 21 23
810 20.65 precipitation 0.1 30 < th dose independent rect. 20 3
815 20.65 atmosphere 995.0 30 > th dose independent rect. 23 21
820 20.65 precipitation 0.1 30 < th dose dependent rect. 20 3
821 20.66 wind 1.0 10 > th dose independent sin 21 NA
833 20.66 temperature 15.0 30 > th dose independent rect. 23 21
841 20.66 temperature 10.0 30 > th dose dependent rect. 23 21
842 20.66 temperature 10.0 30 > th dose dependent rect. 21 23
843 20.67 wind 3.0 30 > th dose independent rect. 6 1
852 20.67 radiation 10.0 4320 < th dose dependent rect. 21 3
862 20.68 temperature 10.0 30 > th dose independent rect. 20 3
864 20.68 temperature 10.0 1440 > th dose independent rect. 21 3
867 20.68 temperature 30.0 30 < th dose independent rect. 20 3
868 20.68 temperature 30.0 1440 < th dose independent rect. 21 3
872 20.68 humidity 50.0 30 > th dose independent rect. 20 3
875 20.68 humidity 50.0 1440 > th dose independent rect. 21 3
882 20.68 atmosphere 995.0 1440 > th dose independent rect. 21 3
883 20.68 atmosphere 1010.0 30 < th dose independent rect. 20 3
885 20.68 radiation 1.0 30 < th dose independent rect. 20 3
890 20.68 radiation 1.0 1440 < th dose independent rect. 21 3
913 20.68 wind 9.0 30 < th dose independent rect. 23 21
915 20.68 temperature 10.0 1440 > th dose independent rect. 24 21
918 20.68 wind 9.0 30 < th dose independent rect. 23 23
920 20.68 radiation 1.0 30 < th dose dependent rect. 20 3
974 20.70 precipitation 0.1 1440 < th dose independent rect. 21 1
981 20.70 precipitation 0.1 90 < th dose independent rect. 19 14
983 20.70 wind 1.0 30 < th dose dependent sin 22 NA
986 20.70 precipitation 0.1 1440 < th dose dependent rect. 21 1
991 20.70 precipitation 0.1 90 < th dose dependent rect. 19 14